FastQCFastQC Report
Wed 28 Jun 2023
EGAF00005804432

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005804432
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences80677
Sequences flagged as poor quality0
Sequence length150
%GC49

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
CATAGATCATGGGACTTCAGCATGGCGGTGTTTGCAGATTTGGACCTGCG3722746.143262639909764No Hit
CATAGAAGAGTGAGACTTGAGATGGGATCAGACTTTATGTGCAATCTATG36664.544046010635001No Hit
CATAGAGGTAAACAAAATAAGACATTACATAGGAGTAAAGTGCTGTACTT24102.98722064528924No Hit
CATAGACACATGTAGGATGGGGTGGCCCCTGTCCCGGGTGCCACGAGGTC11461.4204791948138875No Hit
CATAGATCATGGGACTTCAGCATGGCGGTGTTTGCAGACTTGGACCTGCG11021.3659407266011379No Hit
CATAGAGGGTGCTCCTGTGCTGGGTAGTGGTAGTCTATGAGACCAAGTCT9871.2233970028632695No Hit
CATAGAGCTATCTGGCAAAAACCCATCTAAAAAAATACAAACATTAGCCA9811.2159599390160765No Hit
CATAGAAAATAATGTGGCCGGGCATGGTGGCTCACACCTGTAATCACAGC8431.0449074705306345No Hit
CATAGAGCTATCTGGCAAAAACCCATCTCTACCAAAAACAATACAAAAAT8181.0139197045006632No Hit
CATAGACACATGTAGGATGGGGTGGAGGATGATCAATGCTGCTTCTATGA8010.9928480236002827No Hit
CATAGAAAGTCTGGACCAAGTGCCTCTCTGACTGTGTTAATTTAAAAGAA7480.9271539596167434No Hit
CATAGACTTCAGCCCTCACAAGCCTTACCTCAAATGCCAGGCTCTATGAG7460.9246749383343457No Hit
CATAGAGGGTGCTCCTGTACTGGGTAGTGGTAGTCTATGAGACCAAGTCT6080.7536224698489037No Hit
CATAGACACATGTAGGATGGGGTGGCACACTGATGAGGGTATAAGGTCTA5810.7201556825365346No Hit
CATAGACACATGTAGGATGGGGTGGCTGGGCATTGCTCTTGACATCTCTA5400.6693357462473815No Hit
CATAGACACATGTAGGATGGGGTGGCTTAAATAACAGAAATTTATTTCTC4670.5788514694398651No Hit
CATAGAAAGTCTGGACCAAGTGCCTCACCTCTCTGGGTAGCAGAGTCCTG3700.4586189372435762No Hit
CATAGAAAGTCTGGACCAAGTGCCTCTGCTACCGTATGCCATGATTGTAA3280.4065594903132243No Hit
CATAGACACATGTAGGATGGGGTGGCTCACACCTGTAATCACAGCACTTT3250.4028409583896278No Hit
CATAGACACATGTAGGATGGGGTGGCTCACACCTGTAATCCCAGCACTTT3170.3929248732600369No Hit
CATAGAGCATTACCCTCAAACTATCCCTACCGTAAGTTGCAATATAGATG3080.3817692774892472No Hit
CATAGAGGGTGCTCCTGTACTGGGTGGTGGTAGTCTATGAGACCAAGTCT3050.37805074556565066No Hit
CATAGACACATGTAGGATGGGGTGGCTCACACCTATTATCCTAGCACTTT3040.37681123492445184No Hit
CATAGATCATGGGACTTCAGCATGGCGGTGTCTGCAGATTTGGACCTGCG2760.3421049369708839No Hit
CATAGATCATGGGACTTCAGCATGGCGGTGTTCGCAGATTTGGACCTGCG2600.3222727667117022No Hit
CATAGACACATGTAGGATGGGGTGGCTCACACCTGTAGTAATAGCACTTT2580.3197937454293045No Hit
CATAGAGGGTGCTCCTGTACTGGGTGGTATATTTTCTAAAGCCTGGGATC2480.30739863901731596No Hit
CATAGAAGAGTGAGACTTGAGATGGGACAGAACCAGTAGCAAGATAGGAC2480.30739863901731596No Hit
CATAGAAGCATGGAAGACAAACAGCATGGCGGTGTTTGCAGATTTGGACC2370.29376402196412854No Hit
CATAGAGGGTGCTCCTGTACTGGGTGGTCTGTTCGGCCACTCATGTCTAT2080.2578182133693618No Hit
CATAGATCATGGGACTTCAGCATGGGCATTGCTCTTGACATCTCTATGAG2050.2540996814457652No Hit
CATAGACACATGTAGGATGGGGTGGCTTCCCTTACACCTTCTGCCATGAT1990.24666261759857208No Hit
CATAGATCATGGGACTTCAGCATGGCGGTGTTTGCAGGTTTGGACCTGCG1940.2404650643925778No Hit
CATAGATCATGGGACTTCAGCATGGCGGTGTTTGCAGATTTGGACCCGCG1810.2243514260569927No Hit
CATAGACACATGTAGGATGGGGTGGCTGTCATGATTATCACCTTCTATGA1720.21319583028620298No Hit
CATAGAACTTCAATGCTGTGTTAAAATGCTACACTGCCATCACAGTTCAT1700.2107168090038053No Hit
CATAGAAAATAATGTGGCCGGGCATGGTGGCTCACGCCTATAATTCCAGC1650.20451925579781102No Hit
CATAGATCATGGGACTTCAGCATGGCGGTGTTTGCGGATTTGGACCTGCG1630.20204023451541334No Hit
CATAGATCATGGGACTTCAGCATGGCGGTGTTTGCAGATTTGGGCCTGCG1610.1995612132330156No Hit
CATAGATCATGGGACTTCAGCATGGTGGTGTTTGCAGATTTGGACCTGCG1600.19832170259181675No Hit
CATAGATCATGGGACTTCAGCATGGCGGTATTTGCAGATTTGGACCTGCG1450.17972904297383394No Hit
CATAGAGCATTACCCTCAAACTATCCCTATCCTCTTGCCTCCGTCCCTCT1420.17601051105023735No Hit
CATAGACACATGTAGGATGGGGTGGGCATTGCTCTTGACATCTCTATGAG1410.1747710004090385No Hit
CATAGACACATGTAGGATGGGGTGGCCTCTCCTTCACTTTCTGCCATGAT1360.16857344720304424No Hit
CATAGACACATGTAGGATGGGGTGGCCCAGGAGGTATAGGGGATGGAAGC1340.16609442592064652No Hit
CATAGAAGAGTGAGACTTGAGATGGGAGGATGAGGTCAAGGTGGGAGGAT1330.16485491527944768No Hit
CATAGACACATGTAGGATGGGGTGGCTCATGCCTGTAATCCTAACACTTT1310.16237589399704996No Hit
CATAGAGGTGTCCTTTCCCCACTTTATGTTTTTGTTTGCTTTGTCAGAAA1280.1586573620734534No Hit
CATAGATCATGGGACTTCAGCATGGCGGCGTTTGCAGATTTGGACCTGCG1260.1561783407910557No Hit
CATAGATCATGGGACTTCAGCATGGCGGTGCTTGCAGATTTGGACCTGCG1250.15493883014985685No Hit
CATAGACACATGTAGGATGGGGTGGCTCATGCCTGTAACCCTAGCACTTT1230.1524598088674591No Hit
CATAGAAAATAATGTGGCCGGGCATGGTGGCTCATGCCTATAATTCCAGC1220.15122029822626026No Hit
CATAGACACATGTAGGATGGGGTGGCTAAAGGCCCCGGTTGGGAGGCTCC1210.14998078758506142No Hit
CATAGAGCTATCTGGCAAAAACCCATCTCTACACAAGATATGAAAAATAA1200.14874127694386258No Hit
CATAGAAAATAATGTGGCTGGGCATTGCTCTTGACATCTCTATGAGACCA1180.14626225566146484No Hit
CATAGAGCTATCTGGCAAAAACCCATCTCTACAAAAAATACAAAAATTAG1170.145022745020266No Hit
CATAGAACTCCATCATAAGTCAAAGAGCAGTCTATAGACCAAGTCTCTGC1160.14378323437906715No Hit
CATAGACACATGTAGGATGGGGTGGCTCACGTGTGTAATCTCAGCACTTT1150.1425437237378683No Hit
CATAGAGCTATCTGGCAAAAACCCATCTCCACAAAAAATATAAAAATTAG1120.13882519181427172No Hit
CATAGAGGGTGCTCCTGTACTGGGTGTGCTGGGTAGTGGTAGTCTATGAG1110.13758568117307288No Hit
CATAGATCATGGGACTTCAGCATGGCGGTGTTTGCAGATCTGGACCTGCG1100.136346170531874No Hit
CATAGATCATGGGACTTCAGCATGGCGGTGTTTGCAGATTCGGACCTGCG1080.13386714924947632No Hit
CATAGACACATGTAGGATGGGGTGGCTCATGCGTGTCATCCCAGCCCTTT1070.13262763860827748No Hit
CATAGAGCATTACCCTCAAACTATCCCTAACCACCTATCTACCCCCGGTC1000.12395106411988548No Hit
CATAGATCATGGGACTTCAGCATGGCGGTGTTTGCAGCTTTGGACCTGCG990.12271155347868662No Hit
CATAGAACCAAAAATGGCTAGGCATGTGGCTCACACCTGTAATCACAGCA990.12271155347868662No Hit
CATAGACACATGTAGGATGGGGTGGCTGTGCTGGGTAGTGGTAGTCTATG960.11899302155509006No Hit
CATAGAAAATAATGTGGCCGGGCATGGTGGCTCACGCCTGTAATCCCAGC950.1177535109138912No Hit
CATAGAACCAAAAATGGCTAGGCATGTTGGCTCACACCTGTAATCACAGC920.11403497899029463No Hit
CATAGAGCTATCTGGCAAAAACCCATCTCTACAAAAAGTTAATTAAAAAA900.11155595770789692No Hit
CATAGAAGAGTGAGACTTGAGATGGGAGGATAGGTCAAGGTGGGAGGATG890.11031644706669806No Hit
CATAGAGGTGTCCTTTCCCCACTTTACACTGACGACATGGTTCTACACAT870.10783742578430036No Hit
CATAGAACCAAAAATGGCTAGGCATGGGCATTGCTCTTGACATCTCTATG850.10535840450190265No Hit
CATAGAAAGTCTGGACCAAGTGCCTTACCTCAAATGCCAGGCTCTATGAG840.1041188938607038No Hit
CATAGAACCAAAAATGGCTAGGCATGGTGGCTCACACCTGTAATCACAGC820.10163987257830608No Hit
CATAGAAAATAATGTGGCCGGGCATGGTAGCTCATGCCTGTAATCCCAGT820.10163987257830608No Hit
CATAGAAAATAATGTGGCCGGGCATTGCTCTTGACATCTCTATGAGACCA810.10040036193710723No Hit
CATAGAAGAGTGAGACTTGAGATGGGAAGATTATCCTGGATTATCTTGGT810.10040036193710723No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)