FastQCFastQC Report
Wed 28 Jun 2023
EGAF00005804433

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005804433
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences80677
Sequences flagged as poor quality0
Sequence length150
%GC49

[WARN]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
CATAGAGGTGAGCGGCTGTCTCCACAAGTCCGCGCAGAGCCTTCAGGTCA3748046.45685883213307No Hit
CATAGATTGCACATAAAGTCTGATCCCATCTCAAGTCTCACTCTTCTATG36314.500663138193041No Hit
CATAGACTACCACTACCCAGCACAGCTACTTCTCTATGCACTTTGCCACA23982.9723465175948536No Hit
CATAGACCATCCTCCCACCTTGACCTCCCAAAGTGCTGTGATTACAGGTG15251.8902537278282532No Hit
CATAGACCATCTGCGCATCCTGTCTGGGGTTCATACACACGATCCGACAT12641.5667414504753525No Hit
CATAGACTACCACTACCCAGCACAGGAGCACCCTCTATGTGTAGAACCAT10381.286612045564411No Hit
CATAGACCATCCTCCCACCTTGACCTCTTAAGTAGCTGGGACTACAGGTG9501.177535109138912No Hit
CATAGAAGCAGCATTGATCATCCTCCACCCCATCCTACATGTGTCTATGT8611.067218662072214No Hit
CATAGACCATCCTCCCACCTTGACCTCCTGAGTAGCTGAGACCACAGGCA8211.0176382364242598No Hit
CATAGACTGTTCTTTTAAATTAACACAGTCAGAGAGGCACTTGGTCCAGA7370.9135193425635559No Hit
CATAGAGCCTGGCATTTGAGGTAAGGCTTGTGAGGGCTGAAGTCTATGTG7230.896166193586772No Hit
CATAGACTACCACTACCCAGTACAGGAGCACCCTCTATGTGTAGAACCAT6150.7622990443372956No Hit
CATAGATGACATAGACCTTATACCCTCATCAGTGTGCCACCCCATCCTAC5960.7387483421545173No Hit
CATAGAGATGTCAAGAGCAATGCCCAGCCACCCCATCCTACATGTGTCTA5610.6953654697125575No Hit
CATAGACCATCCTCCCACCTTGACCTCCCAAAGTGCTGGGATTACAGGTG4700.5825700013634617No Hit
CATAGAGTTTTGTTCCCTTGCTGGCACCTTGATCTTGGACCTTCCAACCT4260.5280315331507122No Hit
CATAGAGATGTCAAGAGCAATGCCCAGGCCCCGGAAGGAAGGACTCTGAG3620.4487028521139854No Hit
CATAGACTCAAGAAACTTACAATCATGGCATACGGTAGCAGAGGCACTTG3210.3978829158248324No Hit
CATAGACCATCCTCCCACCTTGACCTTCCAAAGTGCTAGGATAATAGGTG3090.3830087881304461No Hit
CATAGACTACCACCACCCAGTACAGGAGCACCCTCTATGTGTAGAACCAT2920.36193710723006556No Hit
CATAGAGGTAGGCATTTCATCTATATTGCAACTTACGGTAGGGATAGTTT2730.33838640504728734No Hit
CATAGACCATCCTCCCACCTTGACCTCCCAAAGTGCTATTACTACAGGTG2620.3247517879940999No Hit
CATAGAATTCTGTCCTATCTTGCTACTGGTTCTGTCCCATCTCAAGTCTC2500.3098776602997137No Hit
CATAGATCCCAGGCTTTAGAAAATATACCACCCAGTACAGGAGCACCCTC2470.3061591283761171No Hit
CATAGAGGTGAGCGGCTGTCTCCACAGGTCCGCGCAGAGCCTTCAGGTCA2440.3024405964525205No Hit
CATAGACCATCCTCCCACCTTGACCTCCCAGAGTGCTGGAATTATAGGCG2330.2888059793993331No Hit
CATAGAGGTGAGCGGCTGTCTCCAAGTCCGCGCAGAGCCTTCAGGTCAGA2210.2739318517049469No Hit
CATAGAGGTGAGCGGCTGTCTCCACAAGTCCGCGCAGAGCCCTCAGGTCA2200.272692341063748No Hit
CATAGACTCAAGAAACTTACAATCATGGCAGAAGGTGTAAGGGAAGCCAC2020.25038114952216867No Hit
CATAGAGATGTCAAGAGCAATGCCCATGCTGAAGTCCCATGATCTATGTG1990.24666261759857208No Hit
CATAGAGGTGAGCGGCTGTCTCCACAAGTCCGCGCAGAGCCTTCGGGTCA1980.24542310695737324No Hit
CATAGACATGAGTGGCCGAACAGACCACCCAGTACAGGAGCACCCTCTAT1890.23426751118658354No Hit
CATAGAGGTGAGCGGCTGTCTCCACAAGTCCGCGCAGAGCCTTCAGGTCG1860.23054897926298698No Hit
CATAGACCATCCTCCCACCTTGACCTCCATCTTGACCTCCCAAAGTGCTG1830.2268304473393904No Hit
CATAGAAGGTGATAATCATGACAGCCACCCCATCCTACATGTGTCTATGT1820.22559093669819158No Hit
CATAGAGGTGAGCGGCTGTCTCCACGAGTCCGCGCAGAGCCTTCAGGTCA1700.2107168090038053No Hit
CATAGAGAATACAATGAACTGTGATGGCAGTGTAGCATTTTAACACAGCA1690.20947729836260642No Hit
CATAGAGGTGAGCGGCTGTCTCCACAAGTCCGCGCAGAGCCTCCAGGTCA1660.2057587664390099No Hit
CATAGAGGTGAGCGGCTGTCTCCACAAGTCCGCGCAGGGCCTTCAGGTCA1610.1995612132330156No Hit
CATAGAGGTGAGCGGCTGTCTCCACAAGTCCGCGCAGAGCCTTCAGGCCA1460.18096855361503278No Hit
CATAGAGGTGAGCGGCTGTCTCCACAAGTCCGCGCGGAGCCTTCAGGTCA1440.1784895323326351No Hit
CATAGAGGTGAGCGGCTGTCTCCACACGTCCGCGCAGAGCCTTCAGGTCA1400.17353148976783966No Hit
CATAGACCATCCTCCCACCTTGACCTCATCCTCCCATCTCAAGTCTCACT1400.17353148976783966No Hit
CATAGAGGGACGGAGGCAAGAGGATAGGGATAGTTTGAGGGTAATGCTCT1400.17353148976783966No Hit
CATAGAGGTGAGCGGCTGTCTCCACAAGCCCGCGCAGAGCCTTCAGGTCA1390.1722919791266408No Hit
CATAGACCATCCTCCCACCTTGACCTCTCAAAGTGCTAGGGTTACAGGCA1360.16857344720304424No Hit
CATAGAGATGTCAAGAGCAATGCCCACCCCATCCTACATGTGTCTATGTG1350.16733393656184536No Hit
CATAGACCATCCTCCCACCTTGACCTCCCAAAGTGCTGGGATTACAGGCG1340.16609442592064652No Hit
CATAGACTCAAGAAACTTACAATCATGGCAGAAAGTGAAGGAGAGGCCAC1340.16609442592064652No Hit
CATAGAAGGTGATAATCATGACAGCCAACTGATTTCTGACAAAGCAAACA1330.16485491527944768No Hit
CATAGACATGAGTGGCCGAACAGACCCCTCCTCACTTTCCTCTTCCGTCC1300.1611363833558511No Hit
CATAGAGATGTCAAGAGCAATGCCCAGCCACATTATTTTCTATGTGTAGA1280.1586573620734534No Hit
CATAGACCATCCTCCCACCTTGACCTCCCAAAGTGTTAGGATTACAGGCA1260.1561783407910557No Hit
CATAGACCATCCTCCCACCTTGACCTCCCAAAGTGCTGAGATTACACACG1220.15122029822626026No Hit
CATAGACTACCACTACCCAGCACAGCACAACTGCTCTACTGAAATGTGGC1190.1475017663026637No Hit
CATAGACCATCCTCCCACCTTGACCTCCCAACAGGTACTGGGATTACAGG1190.1475017663026637No Hit
CATAGACCATCCTCCCACCTTGACCTCCCAAAGTGCTGGGATTACAGGCA1180.14626225566146484No Hit
CATAGACCATCCTCCCACCTTGACCTCCTGAGTGGCTTGGACTACAGGTG1170.145022745020266No Hit
CATAGACTACCACTACCCAGCACACCCAGTACAGGAGCACCCTCTATGTG1120.13882519181427172No Hit
CATAGAGTTTTGTTCCCTTGCTGGCAGAGACTTGGTCTATAGACTGCTCT1040.1289091066846809No Hit
CATAGACCATCCTCCCACCTTGACCTCCCAAGTAACTGGGACTACAGGTG1030.12766959604348205No Hit
CATAGACCATCCTCCCACCTTGACCTCCCAAAGGGCTGGGATGACACGCA1020.12643008540228318No Hit
CATAGACTACCACTACCCAGCACAGCCACCCCATCCTACATGTGTCTATG1010.12519057476108433No Hit
CATAGACCATCCTCCCACCTTGACCTCCCAAGTAGCTGGGACTACATGCG1000.12395106411988548No Hit
CATAGAGGTGAGCGGCTGTCTCCACAAGTCCGCGCAGCGCCTTCAGGTCA990.12271155347868662No Hit
CATAGACCGGGGGTAGATAGGTGGTTAGGGATAGTTTGAGGGTAATGCTC930.11527448963149349No Hit
CATAGAGGTGAGCGGCTGTCTCCATAAGTCCGCGCAGAGCCTTCAGGTCA890.11031644706669806No Hit
CATAGACCATCCTCCCACCTTGACCTATCCTCCCATCTCAAGTCTCACTC870.10783742578430036No Hit
CATAGACCATCCTCCCACCTTGACCTCCCAAAGTGCTGGGATTACAGGAG850.10535840450190265No Hit
CATAGAGCCTGGCATTTGAGGTAAGGCACTTGGTCCAGACTTTCTATGTG840.1041188938607038No Hit
CATAGAGATGTCAAGAGCAATGCCCGGCCACATTATTTTCTATGTGTAGA830.10287938321950495No Hit
CATAGACTCAAGAAACTTACAATCATGGCAGAAGGCAAAAAAGAAGCAGG820.10163987257830608No Hit
CATAGACCATCCTCCCACCTTGACCTCCTGAGTAGCTGGGACTACAGGCA810.10040036193710723No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)