FastQCFastQC Report
Wed 28 Jun 2023
EGAF00005804434

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005804434
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences80504
Sequences flagged as poor quality0
Sequence length150
%GC37

[FAIL]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
CATAGAGCTTGGGTGCGAACATCAAGGAAGTTTCTGTGAGATCTATGAGA1049613.03786147272185No Hit
CATAGAGCTTTTTCTCCAGCCTCCAAGTAATAACCAGGCCCCTCTATGAG62997.824455927655769No Hit
CATAGAGAAGACTCCCTCAACCCACCCACAGCCAGGAAAGAATCTATGAG53876.691592964324753No Hit
CATAGAAATGATGCTGAAGGGCCTGCCCTCTCTGCTGTTCCTTCTATGAG39934.960001987478884No Hit
CATAGAGGAGGTGAAAGAAATCTACAATGGGTTCTGGGCCCCAGTGTGAA31983.972473417469939No Hit
CATAGACGGATTATTCTCTCCATGGTCTACCAGTTATTAGTTGAATGAGC27773.449518036370863No Hit
CATAGACTCATTGCACTTTCCACAACTGTGTGCTTGAACCAGATTCTATG24703.0681705256881644No Hit
CATAGACTCATTGCACTTTCCACAACTGTCATTGTCGCTGTCCCATCTAT23822.9588591871211367No Hit
CATAGATCATGGGACTTCAGCATGGCTCAGGTATGTCTTTATTAGCTCTA20102.4967703468150653No Hit
CATAGAAGTCACGAGTTTTGTTGTTGTTCTTCCTTTTCTGCCTTCATCTA18702.322865944549339No Hit
CATAGAAATGATGCTGAAGGGCCTGCTGAAGTGATGGGCTAGATCTATGA16452.0433767266222795No Hit
CATAGATGTTTTATCAAAGGCATGCTCATCAAGGAAGTTTCTGTGAGATC11501.4285004471827487No Hit
CATAGATCACGTAGAAACTGGAGAGGCTAATCTGAAATCTTCGTGTTCTA9811.2185729901619795No Hit
CATAGACTCATTGCACTTTCCACAACTGTCCCAACTGTCTCTGAAAAATT9341.1601907979727715No Hit
CATAGACACAACAGAGAGAACGGGCTCCGAGGTCAGGAAGGAACCTGCTC9151.1365894862367087No Hit
CATAGAGTGCCTGTTTCCTCATTCGTCTGTTTCCCCACTCAAATACCATC8691.0794494683493987No Hit
CATAGACTCATTGCACTTTCCACAACTGTCTGCCTCTAAGTAAACTGAAT7980.9912550929146378No Hit
CATAGAAGGACAAAGACATTTAGGACCCACGCTGTCCTTCTCTGAATCTA7320.909271588989367No Hit
CATAGAGGAGGTGAAAGAAATCTACAATGGGCCCCAGTGTGAATACTTCT6080.7552419755540097No Hit
CATAGACCAGCAGACACTCCCATCATCAGGAACCATGGGAGGTCTATGAG5900.7328828381198449No Hit
CATAGACCCAAGACCCCAGCCTTTACACACTGCCCTCTCTGCTGTTCCTT5590.6943754347610057No Hit
CATAGACAGTGCCTTTGTGCGTGTTAGGAGAGCTTCACAACCTTGAAAGG5470.6794693431382292No Hit
CATAGAAGCTGAGAAGACTTCCTAATGCAGAAGTAGGAAGTATTACCCCT5080.6310245453642055No Hit
CATAGAGAAGACTCCCTCAACCCACGCTGTCCTTCTCTGAATCTATGAGA4910.6099075822319387No Hit
CATAGAGCTTTTTCTCCAGCCTCCAAGGGGTAAGGCGTACTGGTCTATGA4830.5999701878167545No Hit
CATAGATGTTTTATCAAAGGCATGCTCATCAGGAACCATGGGAGGTCTAT4720.5863062704958759No Hit
CATAGATCAAGGAAAACACCAGCCCACGCTGTCCTTCTCTGAATCTATGA4140.5142601609857895No Hit
CATAGAGTCTGAATGGTGGGAGAGTGAAAGAAATCTACAAAGGATTCTGG3930.4881745006459306No Hit
CATAGACCGCTTCCCAATTTTTGTAACAACACTGGAGACAGCCGCTCACC3710.4608466660041737No Hit
CATAGACCAACATTTCTTCTCCCAGGGTACACTGACGCTATACCACACTA3600.4471827486832953No Hit
CATAGACACAACAGAGAGAACGGGCTACACTGACGCTATACCACACTACA3440.4273079598529266No Hit
CATAGATCAAGGAAAACACCAGCCCATGCAAACTGTTCTAGGCAGAAGAA3310.411159693928252No Hit
CATAGACCCAGATGCTGTCCCACTAACTATAAGCCATAGGACAATGAATC3050.3788631620789029No Hit
CATAGACCAGCAGACACTCCCATCATGCTGAAGTGATGGGCTAGATCTAT2920.36271489615422836No Hit
CATAGAGAAGACTCCCTCAACCCACCACACTGACGATCATTGTTCACTGC2870.3565040246447381No Hit
CATAGACTCATTGCACTTTCCACAACTGTACACTGACGACATGGGTCTAC2780.34532445592765576No Hit
CATAGACCCAGATGCTGTCCCACTAAACACTGTCATTGTCGCTGTCCCAT2560.31799662128589884No Hit
CATAGACACAACAGAGAGAACGGGCTCTAGGTCTACCAGTTATTAGTTGA2530.3142700983802047No Hit
CATAGATGTGTAGCCTGGGTCTGACATGCCAGGAATCAATGTTCTATGAG2460.3055748782669184No Hit
CATAGAGTGCCTGTTTCCTCATTCGTGACGACATGGTTCTACACATAGAG2400.2981218324555302No Hit
CATAGACACAACAGAGAGAACGGGCTACACTGACGATCATTGTTCACTGC2300.28570008943654973No Hit
CATAGATGTTTTATCAAAGGCATGCTCATTTATTTTAAAGGACTGGAAGC2270.2819735665308556No Hit
CATAGAAATGATGCTGAAGGGCCTGCTGCTGAAGTGATGGGCTAGATCTA2220.2757626950213654No Hit
CATAGAAATGATGCTGAAGGGCCTGTTTCCCCACTCAAATACCATCTATG2120.26334095200238494No Hit
CATAGAGTAGTTAAAACCCACAATGACAGTGGGGTTACCACCTTGCAAGA2100.2608566033985889No Hit
CATAGAAAAAACAGTTGGCCAGGCATCTCAAGGGGTAAGGCGTACTGGTC2050.25464573188909867No Hit
CATAGACCTCCGACAGTTTTTATGCACCTTCATTGTTGCTCTATGAGACC2000.24843486037960846No Hit
CATAGACATTTAATCCTCACAATGACCCATACACTGACGACATGGTCTAC1940.2409818145682202No Hit
CATAGATCAAGGAAAACACCAGCCCACCCACAGCCAGGAAAGAATCTATG1900.23601311736062805No Hit
CATAGATGTGTAGCCTGGGTCTGACAGTGTGGTCTACCAGTTATTAGTTG1890.23477094305873No Hit
CATAGAAATGATGCTGAAGGGCCTGCATGGTTCTACACATAGAAATGATG1860.2310444201530359No Hit
CATAGACTCATTGCACTTTCCACAACTGTCTCATTGCTTCTTGTGGTAAC1860.2310444201530359No Hit
CATAGAGTCTGAATGGTGGGAGAGTGATAGGCTTAGAGGGCTTGCTCTAT1850.22980224585113784No Hit
CATAGACACAACAGAGAGAACGGGCTACACTGACGACATGGTCTACCAGT1800.22359137434164764No Hit
CATAGACCAGCAGACACTCCCATCATTCAGCAAGGGGTAAGGCGTACTGG1790.2223492000397496No Hit
CATAGACCTCCGACAGTTTTTATGCACCCACAGCCAGGAAAGAATCTATG1720.2136539799264633No Hit
CATAGACACAACAGAGAGAACGGGCTACACTGACGACATGGTTCTACCAT1700.21116963132266722No Hit
CATAGATCATGGGACTTCAGCATGGCACACTGCCCTCTCTGCTGTTCCTT1670.20744310841697305No Hit
CATAGAAATGATGCTGAAGGGCCTGCAGAAGTAGGAAGTATTACCCCTCT1670.20744310841697305No Hit
CATAGAAGCTGAGAAGACTTCCTAATGCAGGACCTAAGGCTGGTCTCAAA1620.20123223690748285No Hit
CATAGAAATGATGCTGAAGGGCCTGCGATGCTGAAGTGATGGGCTAGATC1610.1999900626055848No Hit
CATAGACTCATTGCACTTTCCACAACTGTTTTAGCAGCATAATTTCCCAT1600.19874788830368675No Hit
CATAGAAATGATGCTGAAGTGATGGGCTAGATCTATGAGACCAAGTCTCT1600.19874788830368675No Hit
CATAGACTCATTGCACTTTCCACAACTGTACTCATTGCTTCTTGTGGTAA1590.1975057140017887No Hit
CATAGAAATGATGCTGAAGGGCCTGCTGATGCTGAAGTGATGGGCTAGAT1580.1962635396998907No Hit
CATAGACCAGCAGACACTCCCATCATCAAGGAAGTTTCTGTGAGATCTAT1580.1962635396998907No Hit
CATAGAGAAGACTCCCTCAACCCACCGTACCCTGCAGTCTTTGGAGGAAT1580.1962635396998907No Hit
CATAGACCAACATTTCTTCTCCCAGGGTATAAAGCTGGACCCTCTCTGGG1560.19377919109609462No Hit
CATAGACTCATTGCACTTTCCACAACTGTGACGACATGGTTCTACACATA1520.18881049388850243No Hit
CATAGAGCTGTACTGCATCTTTTCTCAAACTGCTGGGGTTGCTCTATGAG1460.18135744807711418No Hit
CATAGACCCAGATGCTGTCCCACTAACACTGACGACATGGTTCTACACAT1410.17514657656762397No Hit
CATAGACCTCCGACAGTTTTTATGCACTGTCCCAACTGTCTCTGAAAAAT1410.17514657656762397No Hit
CATAGAAATGATGCTGAAGGGCCTGCTGACGACATGGTTCTACACATAGA1390.17266222796382788No Hit
CATAGAGTAGTTAAAACCCACAATGACAGTACACTGACGACATGGTTCTA1370.1701778793600318No Hit
CATAGACTCATTGCACTTTCCACAACTGTCTCTGAAAAATTTCTATGAGA1370.1701778793600318No Hit
CATAGAAGGACAAAGACATTTAGGACCCTGCAGTCTTTGGAGGAATCTAT1370.1701778793600318No Hit
CATAGAGAAGACTCCCTCAACCCACCCACATGGGCAGAATTTAAAGCTCC1300.1614826592467455No Hit
CATAGACATTTAATCCTCACAATGACCCATTGCTTCTTGTGGTAACTGGT1300.1614826592467455No Hit
CATAGACTCATTGCACTTTCCACAACTGTCTCATAGAGCAGCATAATTTC1270.15775613634105137No Hit
CATAGACCAACATTTCTTCTCCCAGGGTACACTGACGACATGGTTCTACA1260.15651396203915335No Hit
CATAGACCTCCGACAGTTTTTATGCACGTCTATGTGCTCCCAAGTATTAG1250.1552717877372553No Hit
CATAGATGGCCAAGATACGAGCACATACACTGACGCTATACCACACTACA1170.14533439332207093No Hit
CATAGACCAGCAGACACTCCCATCATACTGACGACATGGTTCTACACATA1160.1440922190201729No Hit
CATAGATCATGGGACTTCAGCATGGAGACAGCCGCTCACCTCTATGAGAC1160.1440922190201729No Hit
CATAGAGAAGACTCCCTCAACCCACCACACTGACGCTATACCACACTACA1150.14285004471827487No Hit
CATAGACCGCTTCCCAATTTTTGTAACAACACTGACGATCATTGTTCACT1150.14285004471827487No Hit
CATAGACCAACATTTCTTCTCCCAGGGTTCTACACATAGACCAACATTGC1150.14285004471827487No Hit
CATAGACAGTGCCTTTGTGCGTGTTACACTGACGACATGGTTCTACACAT1120.13912352181258072No Hit
CATAGAAATGATGCTGAAGGGCCTGCCTGACGACATGGTTCTACACATAG1080.13415482460498857No Hit
CATAGACCAGCAGACACTCCCATCATTTGCCATCTATGAAGAGATCCCAC1060.13167047600119247No Hit
CATAGATTGTGTGTCTCTTCTATATTAACAGTCCACTGACGACATGGTTC990.1229752558879062No Hit
CATAGAAATGATGCTGAAGGGCCTGTCATTGTCGCTGTCCCATCTATGAG950.11800655868031402No Hit
CATAGAAATGATGCTGAAGGGCCTGCACTGACGACATGGTTCTACACATA930.11552221007651794No Hit
CATAGACCAGCAGACACTCCCATCATTTATTTTAAAGGACTGGAAGCCTC870.10806916426512969No Hit
CATAGACTCATTGCACTTTCCACAACTGTAATTGAACAACTATTTGAATA850.10558481566133361No Hit
CATAGACCTCCGACAGTTTTTATGCACTGTCATTGTCGCTGTCCCATCTA820.10185829275563946No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)