FastQCFastQC Report
Wed 28 Jun 2023
EGAF00005804451

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005804451
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences18634
Sequences flagged as poor quality0
Sequence length150
%GC39

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
CATAGAATCCTTTCCCCATTGCTTGTTTTTCTCAGGTTTGTCAAAGATCA12996.971128045508211No Hit
CATAGATGGAGAGAGTGAGGGAAAGGAAATTATGGGAGCCCTGTGAAACG11075.9407534614146185No Hit
CATAGATTGAGCTTAAATGATCTGTGCAAGGTTAAACAATATCCAAATCC10855.822689706987227No Hit
CATAGACCAGACTTTTGAAAGAAGCACACAAAAAGGGCATCTATGTGTAG10055.3933669636148975No Hit
CATAGATATGCCCATGGTTAGGAAGGAAGGATCAATATTGTTAAAATGGG9014.8352473972308685No Hit
CATAGAATCCTTTCCCCATTGCTTGCTCATTATTATTGGATGGGATCTAT6873.6868090587098856No Hit
CATAGATTGCATAGCCATGTGTAGCCCCTAAAGCCCTTGTGAAGTTCTAT6203.327251261135559No Hit
CATAGACTTCCTTGCCCCCATTTATTGCTGAAACATTTTTCTGCATGCAA6033.2360201781689386No Hit
CATAGACTGCCTCAGCCTCCTGAGTAGCTGGGACTACAGGTGCACGCCAC5382.88719544917892No Hit
CATAGATTGCATAGCCATGTATAGCCCCTAAGCCCAGGTCTATGTGTAGA5252.817430503380917No Hit
CATAGATTGCATAGCCATGTGTAGCCCCTAAGCCCAGGTCTATGTGTAGA4982.672534077492755No Hit
CATAGACTGTCATTGCTTGCCCATTGCTTGCTCATTATTATTGGATGGGA4332.323709348502737No Hit
CATAGAATAGCCAGCAGAAGGAAGCACACAAAAAGGGCATCTATGTGTAG4212.2593109369968873No Hit
CATAGAATCCTTTCCCCATTGCTTGTTCATTATTATTGGATGGGATCTAT4012.151980251153805No Hit
CATAGACTGCCTCAGCCTCCTGAGTAGCTGGGACTGCAGGCGCATGCTTG3651.9587850166362564No Hit
CATAGAGGTGAGCGGCTGTCTCCATTCAACTTTCCTTGGCTCTATGTGTA3551.9051196737147151No Hit
CATAGATTGAGCTTAAATGATCTGTGCAACCCCTTAAGAAAATTTAATTG3231.7333905763657829No Hit
CATAGAATCCTTTCCCCATTGCTTGTTTTTCTCAGGTTTGTTGTATATCT2821.5133626703874639No Hit
CATAGACTGCCTCAGCCTCCTGAGTAGCTGGGATTACAGGCATGTGCACC2331.2504024900719117No Hit
CATAGAATAGCCAGCAGAAGGAAGCAGGAATTAGACTCTTGACATCTATG2191.1752710099817538No Hit
CATAGACTGCCTCAGCCTCCTGAGTAGCTGGGACTGCAGGCACGTGTCAC1750.9391435011269721No Hit
CATAGACCCTGGATTAGCATGAGGAACATGGCTTCCCATTTCAGACAAGG1550.8318128152838897No Hit
CATAGACTGCCTCAGCCTCCTGAGTAGCTGGGATTACAGGCACCTGCCAC1520.8157132124074272No Hit
CATAGACATGCTAACATTTCTGGGGATAGTTCAGAAAATTAGAGTACATT1510.8103466781152732No Hit
CATAGACTGCCTCAGCCTCCTGAGTAGCTGGGATTACAGGCAACATGGTG1300.6976494579800364No Hit
CATAGAAGTTCTGATCCACATTCACGTATAGCCCCTAAGCCCAGGTCTAT1150.6171514435977246No Hit
CATAGACCAGACTTTTGAAAGAAGCACAACCCCTTAAGAAAATTTAATTG960.5151872920467961No Hit
CATAGATATGCCCATGGTTAGGAAGGCAGCTCTATGTGTAGAACCATGTC900.4829880862938714No Hit
CATAGACCAGACTTTTGAAAGAAGCACAGCTTCCACATGATGGACATCTA900.4829880862938714No Hit
CATAGAGGTGAGCGGCTGTCTCCAGATGATATGAACCCAAAGGTCTATGT850.4561554148331008No Hit
CATAGACATGCTAACATTTCTGGGGATACTGGGGACTGTGACTCTGTTTT840.4507888805409466No Hit
CATAGACCTCCTGTTTGACCATTTTGAACATAGCCTTTGGGGTTTCTATG810.4346892776644843No Hit
CATAGACCTCCTGTTTGACCATTTTGACTGTTATTACAAAATAATGTTAA750.4024900719115595No Hit
CATAGACATGCTAACATTTCTGGGGATAAGGCTGGCAAAGTTCCAATCTA740.39712353761940544No Hit
CATAGACTGCCTCAGCCTCCTGAGTAGCTGGGATTAATACAAAAAATTAG720.3863904690350971No Hit
CATAGAAAGGCCTTCCTGTATCAGTCAGTGTCAACCCCTTAAGAAAATTT710.38102393474294305No Hit
CATAGACTGCCTCAGCCTCCTGAGTAGCTGGGACGACAGCCCGGCTACTG650.3488247289900182No Hit
CATAGAATCCTTTCCCCATTGCTTGTTTTTGTCAAATTTGTTAAAAGAGG640.34345819469786415No Hit
CATAGATTGAGCTTAAATGATCTGTGCAAGACTAGGCAATTTACAAATCT620.33272512611355587No Hit
CATAGACATGCTAACATTTCTGGGGATACATGCTAACATTACTGGGGACT570.30589245465278525No Hit
CATAGATATGCCCATGGTTAGGAAGGTACGGTAGCAGAGACTTCGTCTCA500.2683267146077063No Hit
CATAGACATGCTAACATTTCTGGGGATTCATAGACATGCTAACATTACTG460.24686057743908982No Hit
CATAGACCAGACTTTTGAAAGAAGCACACAAAAAGGGCATCTATGTGGAA450.2414940431469357No Hit
CATAGACCATCCAGAGGTAATTCTGCTCATTATTATTGGATGGGATCTAT450.2414940431469357No Hit
CATAGATTGCATAGCCATGTGTAGCCCTAAAGCCCTTGTGAAGTTCTATG410.22002790597831923No Hit
CATAGATGGAGAGAGTGAGGGAAAGGATTCTATGAGACCACAACCCCTTA410.22002790597831923No Hit
CATAGACTGCCTCAGCCTCCTGAGTAGCTGGGATTATAAGCACTTGCCAC400.21466137168616506No Hit
CATAGAGTTCAAATGGCCAATCAGGTGAGACTTGGTCTCATAAATTCAAC400.21466137168616506No Hit
CATAGATTGCATAGCCATGTGTAGCCATGCTGAAGTCCCATGATCTATGT390.20929483739401097No Hit
CATAGACTGCCTCAGCCTCCTGAGTAGCTGGGATTACAGGCACCTCTACT380.2039283031018568No Hit
CATAGAAGCAGGATGAAAACATGGTACATTACTGGGGACTGTGACTCTGT370.19856176880970272No Hit
CATAGACCAGACTTTTGAAAGAAGCACACAAAAAGGGCATCATGTGTAGA340.18246216593324033No Hit
CATAGAGGTGAGCGGCTGTCTCCAAACTGGACAATGAGAGGATCTATGTG340.18246216593324033No Hit
CATAGACTGTCATTGCTTGCCCATTGTTATTGAATGAGAGTCCCTGTTGC320.17172909734893207No Hit
CATAGATATGCCCATGGTTAGGAAGGCAGCTTCCACATGATGGACATCTA320.17172909734893207No Hit
CATAGATGGAGAGAGTGAGGGAAAGGATGAGCAGGAATTAGACTCTTGAC300.16099602876462382No Hit
CATAGAAGTTCTGATCCACATTCACGTATAGCCCCTAAAGCCCTTGTGAA300.16099602876462382No Hit
CATAGACTGCCTCAGCCTCCTGAGTAGGTCAGGAGATTGAGACCATCCTG290.15562949447246968No Hit
CATAGACTGTCATTGCTTGCCCATTGCTTGTTTTTCTCAGGTTTGTCAAA280.15026296018031557No Hit
CATAGAATCCTTTCCCCATTGCTTGTATACATCTATGTGTAGAACCATGT280.15026296018031557No Hit
CATAGACTGTCATTGCTTGCCCATTGTTATTGGAAGTTAGGAAGCCAGCT270.14489642588816143No Hit
CATAGATATGCCCATGGTTAGGAAGGCAGCTTTGGAAGTTAGGAAGCCAG260.13952989159600732No Hit
CATAGACCATCCAGAGGTAATTCTGCTACCGTACATCACTTATACGCCTC260.13952989159600732No Hit
CATAGACTGTCATTGCTTGCCCATTGCTCATTATTATTGGATGGGATCTA260.13952989159600732No Hit
CATAGACCATCCAGAGGTAATTCTGCTACCAACCCCTTAAGAAAATTTAA260.13952989159600732No Hit
CATAAATTCAACAGGCTTTCATCTATGTGTAGAACCATGTCGTCAGTGTA250.13416335730385315No Hit
CATAGACTGCCTCAGCCTCCTGAGTAGCTGGGATTACAGGCACCCACCAC230.12343028871954491No Hit
CATAGACATGCTAACATTTCTGGGGATTGTGACTCACTGGGGACTGTGAC220.11806375442739078No Hit
CATAGACTGTCATTGCTTGCCCATTGGGGTTCATCCCATCAACTTTTATT210.11269722013523666No Hit
CATAGACATGCTAACATTACTGGGGACTGTGACTCTGTTTTCTATGTGTA200.10733068584308253No Hit
CATAGATGACTTGGGGGAAAATGGTAGATGACTGGGGACTGTGACTCTGT190.1019641515509284No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)