FastQCFastQC Report
Wed 28 Jun 2023
EGAF00005804455

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005804455
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences66685
Sequences flagged as poor quality0
Sequence length150
%GC35

[FAIL]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
CATAGATGAGTGTCCTTGTAGATGTGCAATATGGGCTGGGTGATCTATGT41926.2862712753992644No Hit
CATAGAGGCACGATCTTGTTTCACTGAGCTGAGGGTCACTTCTATGTGTA26924.036889855289795No Hit
CATAGAGGAGTGACTTTTGTTGCTGCACCTTCCACTACCCACCTGCCTCT26163.9229211966709157No Hit
CATAGAAGGGTTGAGTCTGGAGGCTGACACCTTCCTCCAGACTCTATGTG24773.714478518407438No Hit
CATAGAAAAAGAACTGAGGAAAGGCAACCAAAATGTCAGGGGATCCTCTA23183.476044087875834No Hit
CATAGAGGTGAGCGGCTGTCTTCAGCTCTTTGAGGCATCTATGTGTAGAA16952.541801004723701No Hit
CATAGAGGTGAGCGGCTGTCTCCAGCTCTTTGAGGCATCTATGTGTAGAA15582.336357501687036No Hit
CATAGAGGCAGAGTCCAAAGTGTCCTCTAGCCAAATTCCTTACCGATCTA15372.3048661618055037No Hit
CATAGAAGTACCATCAGAGTGAACAGGGCAGAGAGTGTGTTGTATTCTAT13271.9899527629901776No Hit
CATAGATCACTGATTCTGTATTTGCAAATTCTGTTTACTCGGAGATTTGA12271.8399940016495464No Hit
CATAGAGCAGCATTTCTCTCCAAGGAGGAGCTGACTTACTGTTCTATGTG10251.5370773037414711No Hit
CATAGAGCTCCAAGATTTTTAGCTGTTCTGTTTACTCGGAGATTTGACTG10221.5325785409012522No Hit
CATAGATCACCAGATGCCAGTTGTGCAATATGGGCTGGGTGATCTATGTG10151.522081427607408No Hit
CATAGATGGGATTATAGGTGTGAGCCATGCTGAAGTCCCATGATCTATGT9881.4815925620454373No Hit
CATAGACATGATGTGCTATGAAGTTAGAGGAGAATGATATTGTTGCAGAT9761.4635975106845618No Hit
CATAGAGCCCCCAGAGAAGAATGACCCCAGGTAGCAAAACAGAGTCTATG8261.238659368673615No Hit
CATAGAGGTGGTGGGTACTTGTAGTCCATCCAGTCCAGCTCCTTCTATGT8021.2026692659518632No Hit
CATAGAAGGGTTGAGTCTGGAGGCTGACACCTTCCACTACCCACCTGCCT7521.1276898852815476No Hit
CATAGATGGGATTATAGGTGTGAGCCATGTCGTCAGTGTAGACCTTTTTC7471.120191947214516No Hit
CATAGAAACAGCAAAGCCCTCCACCACCCACCTGCCTCTATGTGTAGAAC7431.114193596760891No Hit
CATAGATCTCCCTAATTAACTAAGCTAATGTTCTGTTTACTCGGAGATTT7401.1096948339206718No Hit
CATAGAAACAGCAAAGCCTTCCACTACCCACCTGCCTCTATGTGTAGAAC6911.0362150408637625No Hit
CATAGATACCTGTCCTCTGCCTCGAGGAGAATGATATTGTTGCAGATTTC6911.0362150408637625No Hit
CATAGATGGGATTATAGGTGTGAGCCATGTCGTCAGTGTACTTTTCTAAT6430.9642348354202595No Hit
CATAGAGCTCCAAGATTTTTAGCTGTTCTCTATGTGTAGAACCATGTCGT6360.9537377221264153No Hit
CATAGACCATCCCTTCTACAAGAGGCATCTATGTGTACGGCAACATATCA5310.7962810227187523No Hit
CATAGATGAGTGTCCTTGTAGATGTGCAGGGCAGAGAGTGTGTTGTATTC4980.746794631476344No Hit
CATAGATCTCCCTAATTAACTAAGCTAATGTTCTATGTGTAGAACCATGT4820.722801229661843No Hit
CATAGAGGTTTTCTGTTTCTGTGTTAGTTTGCTTTCTGTTTACTCGGAGA4820.722801229661843No Hit
CATAGAGGCAGAGTCCAAAGTGTCCTGGGAAAGGTATGTGGCACATCTAT4510.6763140136462473No Hit
CATAGAGCTCCAAGATTTTTAGCTGTTCTCTATGTGTAGAACCATGTCGC4320.6478218489915273No Hit
CATAGAGTGATCCTCCTTTCTCAGCCCCAGGTAGCAAAACAGAGTCTATG4040.6058333958161506No Hit
CATAGATGGGATTATAGGTGTGAGCCATGTCGTCAGTGTAGGAAACATTG4030.6043338082027443No Hit
CATAGAGGTGGTGGGTACTTGTAGTCCCCAGGTAGCAAAACAGAGTCTAT3960.5938366949089No Hit
CATAGAGGTGGTGGGTACTTGTAGTCCGTGTCGTCAGTGTTGGGAAAGGT3670.550348654120117No Hit
CATAGAGGTTTTCTGTTTCTGTGTTAGTTTGCTTCTGTTTACTCGGAGAT3660.5488490665067107No Hit
CATAGAGTGCTCTCTTTCCCCACCCTTCCACTACCCACCTGCCTCTATGT3600.5398515408262727No Hit
CATAGAGTGCTCTCTTTCCCCACCCCAGGTAGCAAAACAGAGTCTATGTG3600.5398515408262727No Hit
CATAGAGTGCTCTCTTTCCCCACCCTAACCTCCCACCCCAGCTGTCTATG3570.5353527779860539No Hit
CATAGAGCTCCAAGATTTTTAGCTGTTCTATAGAAGTGTATTAATTATCT3410.5113593761715528No Hit
CATAGAGGCAGAGTCCAAAGTGTCCTTGTAGAAGTGTATTAATTATCTAT3350.5023618504911149No Hit
CATAGAGTGATCCTCCTTTCTCAGCCATGCTGAAGTCCCATGATCTATGT3250.4873659743570518No Hit
CATAGATACCTGTCCTCTGCCTCGAGGAGGAGCTGACTTACTGTTCTATG3180.47686886106320764No Hit
CATAGAAAAAGAACTGAGGAAAGGCAACTTATCTGGGCACGGTGGTCTAT3130.46937092299617605No Hit
CATAGAAGCCTTTTGAGATCTGAGCATCTATGTACGGCAACATATCAGAA3070.4603733973157382No Hit
CATAGAGCTCCAAGATTTTTAGCTGTTCTCAGGGCAGAGAGTGTGTTGTA3010.45137587163530024No Hit
CATAGATCACTGATTCTGTATTTGCAAATTCTTGCTCCTTCTCACACAAA2930.43937917072804983No Hit
CATAGAGGCAGAGTCCAAAGTGTCCTTGTAGATGTGCAATATGGGCTGGG2930.43937917072804983No Hit
CATAGAGGCACGATCTTGTTTCACTGTGCTGAGGGTCACTGACAGGTCTT2930.43937917072804983No Hit
CATAGATGGGATTATAGGTGTGAGCCATGTCTCAGTGTAGAAGTGTATTA2780.4168853565269551No Hit
CATAGATGGGATTATAGGTGTGAGCCATGTCGTCAGTGTGTATATCTAGG2760.4138861813001425No Hit
CATAGAGGTGAGCGGCTGTCTCCATTCTCTCAGGGCTGTTCTCTATGTGT2660.3988903051660793No Hit
CATAGATGGGATTATAGGTGTGAGCCAGGGCAGAGAGTGTGTTGTATTCT2620.39289195471245403No Hit
CATAGAGTGATCCTCCTTTCTCAGCTTACACTGCACATGGGGTCTATGTG2540.38089525380520356No Hit
CATAGATGGGATTATAGGTGTGAGCCATGTCGTCAGTGTAGAAGTGTATT2510.3763964909649846No Hit
CATAGAGGTGGTGGGTACTTGTAGTCCGTGTAGGAAACATTGGAAAGATG2480.3718977281247657No Hit
CATAGAGCTCCAAGATTTTTAGCTGTTCTATGTGGCCATGCTGAAGTCCC2320.3479043263102647No Hit
CATAGAGGTGGTGGGTACTTGTAGTCCGTGTTGGGAAAGGTATGTGGCAC2320.3479043263102647No Hit
CATAGACGAATTGCCCATGTCAGTAAATCTACGGCAACATATCAGAAGCA2250.3374072130164205No Hit
CATAGATCCCATACTCCTCCATTACCCTTCCACTACCCACCTGCCTCTAT2130.3194121616555447No Hit
CATAGACACAGGCCAATCTCAGCAGAAGTGTATTAATTATCTATGGCTGC2130.3194121616555447No Hit
CATAGATCCCATACTCCTCCATTACCCTGGGAAAGGTATGTGGCACATCT2090.31341381120191947No Hit
CATAGATACCTGTCCTCTGCCTCTAGCCAAATTCCTTACCGATCTATGTG2070.3104146359751068No Hit
CATAGACGAAATGTACAGGTTGCTAAGTTAATTAGGGATAGCGAGAAGAG2030.3044162855214816No Hit
CATAGATATTCTGCCCCCTCCTCTCCACGGCAACATATCAGAAGCATCTA2020.3029166979080753No Hit
CATAGAAGCCTTTTGAGATCTGAGCATTCTCTCAGGGCTGTTCTCTATGT2010.301417110294669No Hit
CATAGAAGCCTTTTGAGATCTGAGCATCTATGTGTAGAACGGCAACATAT1940.29091999700082477No Hit
CATAGATATTCTGCCCCCTCCTCTCCTACGGCAACATATCAGAAGCATCT1900.2849216465471995No Hit
CATAGAGCTCCAAGATTTTTAGCTGTTCTCTATCTGTTTACTCGGAGATT1890.2834220589337932No Hit
CATAGAGGTGAGCGGCTGTCTCCATGCTGAAGTCCCATGATCTATGTGTA1880.2819224713203869No Hit
CATAGACACACTGACAATTTGCACCTGGCCAAAAATTTCCATCTATGTGT1830.27442453325335536No Hit
CATAGAGCTCCAAGATTTTTAGCTGTTCTATGTGTAGAACCATGTCGTCA1820.272924945639949No Hit
CATAGAGCTCCAAGATTTTTAGCTGTTCTCTATGTGCATTCTCTCAGGGC1800.26992577041313637No Hit
CATAGATCACCAGATGCCAGTTGTGCGTGTGGTCTAGGAGGAGCTGACTT1750.26242783234610484No Hit
CATAGATGGGATTATAGGTGTGAGCCATGTCGTCAGTGCTAACCTCCCAC1730.2594286571192922No Hit
CATAGAGTGCTCTCTTTCCCCACCCTATAGGAGGAGCTGACTTACTGTTC1720.25792906950588584No Hit
CATAGAGTGCTCTCTTTCCCCACCCTCACTGAGCTGAGGGTCACTTCTAT1710.25642948189247955No Hit
CATAGATTCAACCAGCCATCCCCAATCACTGAGCTGAGGGTCACTTCTAT1680.2519307190522606No Hit
CATAGAGGCAGAGTCCAAAGTGTCCTTCCACTACCCACCTGCCTCTATGT1670.2504311314388543No Hit
CATAGATATTCTGCCCCCTCCTCTCCTACGATAGCGAGAAGAGTGGAGGC1590.23843443053160382No Hit
CATAGAGCTCCAAGATTTTTAGCTGTTCTATGTGAGGAAACATTGGAAAG1570.23543525530479117No Hit
CATAGACCACACACACAACTGAGAGTCACTGAGCTGAGGGTCACTTCTAT1540.23093649246457224No Hit
CATAGAGTCCTTCCCTCTCACACATGTCGTCAGTGTCCCCAGGTAGCAAA1420.2129414411036965No Hit
CATAGATCACCAGATGCCAGTTGTGCGGAAGACACAGCACACTCTTCTAT1420.2129414411036965No Hit
CATAGAGGTGAGCGGCTGTCTCCAACAATGCCTCACACACAGGTCTATGT1360.2039439154232586No Hit
CATAGACCACACACACAACTGAGAGTGGGAAAGGTATGTGGCACATCTAT1330.19944515258303966No Hit
CATAGAGCAGCATTTCTCTCCAAGGATAGAGCAGCATTCTCTCAGGGCTG1300.19494638974282072No Hit
CATAGAAACAGCAAAGCCCTCCACCAGTCCATCCAGTCCAGCTCCTTCTA1280.1919472145160081No Hit
CATAGAGTCCTTCCCTCTCACACATGTCGTCAGTGTAGCTTACACTGCAC1260.18894803928919546No Hit
CATAGAAAAAGAACTGAGGAAAGGCAACGGCAACATATCAGAAGCATCTA1260.18894803928919546No Hit
CATAGAGTGCTCTCTTTCCCCACCCTCATAGAGGAGAATGATATTGTTGC1240.18594886406238284No Hit
CATAGAGCAGCATTTCTCTCCAAGGACTTGGTCTCATAGAGCAGCATTCT1190.17845092599535128No Hit
CATAGAGGCACAGGGATAATGAGGGAGGAGAATGATATTGTTGCAGATTT1170.17545175076853864No Hit
CATAGAGCCCCCAGAGAAGAATGACCTCTAGCCAAATTCCTTACCGATCT1170.17545175076853864No Hit
CATAGATGGGATTATAGGTGTGAGCCATGGGGAAAAGGGATAGGAGGGTC1130.1694534003149134No Hit
CATAGAACCAACCTCTCTATCTCCGTTCTGTTTACTCGGAGATTTGACTG1120.16795381270150708No Hit
CATAGATGGGAGTTTCTAGCTTTGGTCTTGCTCCTTCTCACACAAATCTA1110.1664542250881008No Hit
CATAGATGGGAGTTTCTAGCTTTGGTCTCATAGATGGGTAGAGAGTTCTG1110.1664542250881008No Hit
CATAGATGGGATTATAGGTGTGAGCCATGTCGTCAGTGCCTCTAGCCAAA1090.16345504986128814No Hit
CATAGACCATCCCTTCTACAAGAGGCACGATCTTGTTTCACTGAGCTGAG1070.16045587463447553No Hit
CATAGAAACAGCAAAGCCCTCCACCATGTCGTCAGTGTAGCTTACACTGC1040.15595711179425656No Hit
CATAGAGGCACGATCTTGTTTCACTGTGTCTCATAGGGCACTGAGACCAC1030.15445752418085026No Hit
CATAGATGGGATTATAGGTGTGAGCCATGTCGTCAGTGCAGGGCAGAGAG1000.14995876134063132No Hit
CATAGACCACACACACAACTGAGAGTGGTCTAGAGGAGAATGATATTGTT980.1469595861138187No Hit
CATAGATGGGATTATAGGTGTGAGCCATGTCGTCAGTGTACGGCAACATA960.14396041088700606No Hit
CATAGAGCTCCAAGATTTTTAGCTGTTCTCTATGCATTCTCTCAGGGCTG960.14396041088700606No Hit
CATAGAAAAAGAACTGAGGAAAGGCAACATATCAGAAGCATCTATGTGTA930.13946164804678715No Hit
CATAGAGCTCCAAGATTTTTAGCTGTTCTCTATGGCATTCTCTCAGGGCT930.13946164804678715No Hit
CATAGATCACCAGATGCCAGTTGTGCTATGAAGCAGAGGTAGATGGATCA920.13796206043338083No Hit
CATAGAGGCACGATCTTGTTTCACTGTGCTGAGGGTCACTTCTATGTGTA900.13496288520656818No Hit
CATAGAGCTCCAAGATTTTTAGCTGTTCTATGAGGAGGAGCTGACTTACT880.13196370997975557No Hit
CATAGAGGTGAGCGGCTGTCTCCACCCCAGGTAGCAAAACAGAGTCTATG870.13046412236634924No Hit
CATAGACATGATGTGCTATGAAGTTAGAGGAGGAGCTGACTTACTGTTCT860.12896453475294292No Hit
CATAGAGCTCCAAGATTTTTAGCTGTTCTCTATGTGTAGAACCATTCTCT830.12446577191272401No Hit
CATAGAGCAGCATTTCTCTCCAAGGACACTGACGGCAACATATCAGAAGC800.11996700907250507No Hit
CATAGAGCTCCAAGATTTTTAGCTGTTCTCTATGTGTGCATTCTCTCAGG800.11996700907250507No Hit
CATAGATGGGATTATAGGTGTGAGCCATGTCGTCAGTGTCTTGCTCCTTC790.11846742145909875No Hit
CATAGATGGGATTATAGGTGTGAGCCATGTCGTCAGGGTCACTGACAGGT780.11696783384569243No Hit
CATAGAGCTCCAAGATTTTTAGCTGTTCTCTATGTGTAGAACCATGTCCA770.11546824623228612No Hit
CATAGAGTCCTTCCCTCTCACACATGTGAGTCCATCCAGTCCAGCTCCTT760.11396865861887981No Hit
CATAGAAACAGCAAAGCCCTCCACTACCCACCTGCCTCTATGTGTAGAAC750.11246907100547349No Hit
CATAGATATTCTGCCCCCTCCTCTCCCCAGGTAGCAAAACAGAGTCTATG750.11246907100547349No Hit
CATAGATGGGATTATAGGTGTGAGCCATGTCGTCAGTGCGGAAGACACAG740.11096948339206716No Hit
CATAGAGCTCCAAGATTTTTAGCTGTTCTCATTCTCTCAGGGCTGTTCTC740.11096948339206716No Hit
CATAGAGGCACGATCTTGTTTCACTGTTTACTCGGAGATTTGACTGTTCT720.10797030816525456No Hit
CATAGATGGGATTATAGGTGTGAGCCATGTCTTCAGCTCTTTGAGGCATC700.10497113293844193No Hit
CATAGACCCCCTTGAGTTCACTGGACTGAGGGTCACTGACAGGTCTTAAA680.1019719577116293No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)