FastQCFastQC Report
Wed 28 Jun 2023
EGAF00005804456

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005804456
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences122305
Sequences flagged as poor quality0
Sequence length150
%GC36

[OK]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
CATAGAACAGTCAAATCTCCGAGTAAACAGAATTTGCAAATACAGAATCA119199.74530885900004No Hit
CATAGAAATCTGCAACAATATCATTCTCCTCTAACTTCATAGCACATCAT99728.153387024242672No Hit
CATAGATCACCCAGCCCATATTGCACATCTACAAGGACACTCATCTATGA62015.070111606230325No Hit
CATAGAGTCTGGAGGAAGGTGTCAGCCTCCAGACTCAACCCTTCTATGAG51904.243489636564327No Hit
CATAGATCATGGGACTTCAGCATGGCGGTGTTTGCAGATTTGGACCTGCG46913.835493234127795No Hit
CATAGAGGATCCCCTGACATTTTGGTTGCCTTTCCTCAGTTCTTTTTCTA46253.781529782102121No Hit
CATAGATTTGTGTGAGAAGGAGCAAGAACATTAGCTTAGTTAATTAGGGA44013.59838109643923No Hit
CATAGAACAGTCAAATCTCCGAGTAAACAGAACATTAGCTTAGTTAATTA34422.814275785944974No Hit
CATAGAATACAACACACTCTCTGCCCTGTTCACTCTGATGGTACTTCTAT31632.5861575569273536No Hit
CATAGATGGAAATTTTTGGCCAGGCGCAGTGGCTCACACCTATAATCCCA19471.5919218347573687No Hit
CATAGATCGGTAAGGAATTTGGCTAGAGGACACTTTGGACTCTGCCTCTA17931.4660071133641306No Hit
CATAGATGGAAATTTTTGGCCAGGCGCGGTGGCTCACACCTATAATCCCA17511.4316667348023384No Hit
CATAGAACAGTAAGTCAGCTCCTCCTATAGAACATTAGCTTAGTTAATTA16261.3294632271779567No Hit
CATAGACCTGTGTGTGAGGCATTGTTGGTGGAGGGCTTTGCTGTTTCTAT15791.2910347083111893No Hit
CATAGAACAGTAAGTCAGCTCCTCCTTGGAGAGAAATGCTGCTCTATGAG15631.2779526593352684No Hit
CATAGAGGCAGGTGGGTAGTGGAAGGTGCAGCAACAAAAGTCACTCCTCT15611.2763174032132782No Hit
CATAGATGGAAATTTTTGGCCAGGCGTGGTGGCTCACACCTATAATCCCA13071.0686398757205346No Hit
CATAGATCACCCAGCCCATATTGCACAACTGGCATCTGGTGATCTATGAG12271.0032296308409305No Hit
CATAGAGCAGCCATAGATAATTAATACACTTCTCATAGAACAGCTAAAAA11340.9271902211683904No Hit
CATAGAAGGAGCTGGACTGGATGGACTACAAGTACCCACCACCTCTATGA11260.92064919668043No Hit
CATAGATCCCCATCTTTCCAATGTTTCCTTGGAGAGAAATGCTGCTCTAT10910.8920322145456032No Hit
CATAGAAGTGACCCTCAGCTCAGTGAAACAAGATCGTGCCTCTATGAGAC9520.7783819140672908No Hit
CATAGAACAGTCAAATCTCCGAGTAAACAGAACAGCTAAAAATCTTGGAG9160.7489473038714689No Hit
CATAGAATACAACACACTCTCTGCCCTGCACATCTACAAGGACACTCATC9140.7473120477494788No Hit
CATAGAGCAGCCATAGATAATTAATACACTTCTGTAGCAGAACATTAGCT8850.7236008339806221No Hit
CATAGAGGCAGGTGGGTAGTGGAAGGGTAATGGAGGAGTATGGGATCTAT8570.7007072482727608No Hit
CATAGAGGCAGGTGGGTAGTGGAAGGTGTCAGCCTCCAGACTCAACCCTT7380.6034095090143494No Hit
CATAGACAGCTGGGGTGGGAGGTTAGGGTGGGGAAAGAGAGCACTCTATG6650.5437226605617105No Hit
CATAGATTTGTGTGAGAAGGAGCAAGAATTTGCAAATACAGAATCAGTGA6580.5379992641347451No Hit
CATAGAGGCAGGTGGGTAGTGGAAGGGTGGGGAAAGAGAGCACTCTATGA6070.49630023302399734No Hit
CATAGATGTGCCACATACCTTTCCCAGGACACTTTGGACTCTGCCTCTAT5550.45378357385225454No Hit
CATAGAGGCAGGTGGGTGGTGGAGGGCTTTGCTGTTTCTATGAGACCAAG5300.43334287232737834No Hit
CATAGATGCTTCTGATATGTTGCCGTAAGAACATTAGCTTAGTTAATTAG5190.4243489636564327No Hit
CATAGAGGCAGGTGGGTAGTGGAAGGCTTTGCTGTTTCTATGAGACCAAG4880.399002493765586No Hit
CATAGAGCAGCCATAGATAATTAATACACTTCTTACACATAGAACAGCTA4720.3859204447896652No Hit
CATAGAGGCAGGTGGGTAGTGGAAGGACACTTTGGACTCTGCCTCTATGA4600.37610890805772457No Hit
CATAGATGCCTCAAAGAGCTGAAGACAGCCGCTCACCTCTATGAGACCAA4410.36057397489881854No Hit
CATAGAAATCTGCAACAATATCATTCTCCTCGAGGCAGAGGACAGGTATC4360.35648583459384325No Hit
CATAGAACAGTCAAATCTCCGAGTAAACAGAAAGCAAACTAACACAGAAA4260.34830955398389274No Hit
CATAGAACAGTCAAATCTCCGAGTAAACAGAAAAGCAAACTAACACAGAA3980.3254159682760312No Hit
CATAGATGCTTCTGATATGTTGCCGTAGCAAACTAACACAGAAACAGAAA3610.29516373001921425No Hit
CATAGACGGGCCAGAGAATAGTGCTAGGACACTTTGGACTCTGCCTCTAT3560.291075589714239No Hit
CATAGAGAACAGCCCTGAGAGAATGCTCAGATCTCAAAAGGCTTCTATGA3490.2853521932872736No Hit
CATAGAAATCTGCAACAATATCATTCTCCTCATAGAGAACAGCTAAAAAT3380.276358284616328No Hit
CATAGACTCTGTTTTGCTACCTGGGGAGAGGAGGGGGCAGAATATCTATG3140.25673521115244674No Hit
CATAGACCCCATGTGCAGTGTAAGCTGAGAAAGGAGGATCACTCTATGAG3100.25346469890846657No Hit
CATAGAGCCTCCACTCTTCTCGCTATCGTAGGCTGAGAAAGGAGGATCAC3090.2526470708474715No Hit
CATAGACCACCGTGCCCAGATAAGTTTTGTAGTTTTGGTAGAGACAGGGT3020.24692367442050608No Hit
CATAGAAATCTGCAACAATATCATTCTCCTCTATAGGGTAATGGAGGAGT2990.24447079023752097No Hit
CATAGACGGGCCAGAGAATAGTGCTAGACCAAAGCTAGAAACTCCCATCT2960.2420179060545358No Hit
CATAGATGGAAATTTTTGGCCAGGCGCGATGGCTCACACCTATAATCCCA2960.2420179060545358No Hit
CATAGAGCCTCCACTCTTCTCGCTATCGTAGTCCAGTGAACTCAAGGGGG2950.24120027799354074No Hit
CATAGACTCTGTTTTGCTACCTGGGGTCATTCTTCTCTGGGGGCTCTATG2850.2330239973835902No Hit
CATAGATCATGGGACTTCAGCATGGCTGAGAAAGGAGGATCACTCTATGA2840.23220636932259514No Hit
CATAGATGCTTCTGATATGTTGCCGTACATGTGTGAGAGGGAAGGACTCT2820.23057111320060503No Hit
CATAGATGCTTCTGATATGTTGCCGTAGGGTAATGGAGGAGTATGGGATC2750.22484771677363968No Hit
CATAGAGCAGCCATAGATAATTAATACACTTCTGCTGAGATTGGCCTGTG2740.22403008871264463No Hit
CATAGAAGTGACCCTCAGCTCAGTGACTCTCAGTTGTGTGTGTGGTCTAT2710.22157720452965946No Hit
CATAGAGCAGCCATAGATAATTAATACACTTCTCCCTCATTATCCCTGTG2650.21667143616368917No Hit
CATAGAGCCTCCACTCTTCTCGCTATCGTACAGGTGCAAATTGTCAGTGT2640.2158538081026941No Hit
CATAGACCCCATGTGCAGTGTAAGCTTACGGAGATAGAGAGGTTGGTTCT2480.20277175912677323No Hit
CATAGAAGGAGCTGGACTGGATGGACTGGTGGAGGGCTTTGCTGTTTCTA2420.19786599076080288No Hit
CATAGAAGAGTGTGCTGTGTCTTCCGTGTAGGGTGGGGAAAGAGAGCACT2390.19541310657781777No Hit
CATAGACCACCGTGCCCAGATAAGTTTTGTATTTTTGGTAGAGACAGGGT2340.19132496627284248No Hit
CATAGACCACCGTGCCCAGATAAGTTTTGGTACTTTTGGTAGAGACAGGG2330.19050733821184743No Hit
CATAGAATACAACACACTCTCTGCCCTGCCTCTTGTAGAAGGGATGGTCT2300.18805445402886228No Hit
CATAGAAGTGACCCTCAGCTCAGTGAGGGTGGGGAAAGAGAGCACTCTAT2240.18314868566289194No Hit
CATAGAAGTGACCCTCAGCTCAGTGAGAACATTAGCTTAGTTAATTAGGG2240.18314868566289194No Hit
CATAGAGCCTCCACTCTTCTCGCTATCGTAGGTCATTCTTCTCTGGGGGC2220.18151342954090183No Hit
CATAGAGCAGCCATAGATAATTAATACACTTCTATGATGCCTCTTGTAGA2150.17579003311393648No Hit
CATAGAACAGTCAAATCTCCGAGTAAACAGAACATAGAACAGCTAAAAAT2150.17579003311393648No Hit
CATAGATCGGTAAGGAATTTGGCTAGAGGGTAATGGAGGAGTATGGGATC2140.17497240505294143No Hit
CATAGAAGAGTGTGCTGTGTCTTCCGTATAGACATGTGTGAGAGGGAAGG2140.17497240505294143No Hit
CATAGAGCCTCCACTCTTCTCGCTATCGTACTCGAGGCAGAGGACAGGTA2140.17497240505294143No Hit
CATAGATGCTTCTGATATGTTGCCGTAGCCTGTTCACTCTGATGGTACTT2130.17415477699194637No Hit
CATAGAAGAGTGTGCTGTGTCTTCCGTGTACAGTGAAACAAGATCGTGCC2130.17415477699194637No Hit
CATAGAGCCTCCACTCTTCTCGCTATCGTAGCACAACTGGCATCTGGTGA2100.1717018928089612No Hit
CATAGACTAATAGCCTCCCAAAGATTCCTTGGAGAGAAATGCTGCTCTAT2070.16924900862597606No Hit
CATAGACCAGCAGTTCTACTCCTAGATATACAGTGAAACAAGATCGTGCC2060.168431380564981No Hit
CATAGAAGAGTGTGCTGTGTCTTCCGTACAGGTGCAAATTGTCAGTGTGT2050.16761375250398594No Hit
CATAGAGCCTCCACTCTTCTCGCTATCGTAGGACACTTTGGACTCTGCCT2000.16352561219901066No Hit
CATAGAGCCTCCACTCTTCTCGCTATCGTAAGGGTGGGGAAAGAGAGCAC1970.1610727280160255No Hit
CATAGATGCCTCAAAGAGCTGGAGACAGCCGCTCACCTCTATGAGACCAA1940.15861984383304034No Hit
CATAGATGCTTCTGATATGTTGCCGTAGGAGAGGAGGGGGCAGAATATCT1860.1520788193450799No Hit
CATAGATCACCCAGCCCATATTGCACATCTACAAGGACACTTTGGACTCT1750.14308491067413434No Hit
CATAGATGCTTCTGATATGTTGCCGTGTTGCCTTTCCTCAGTTCTTTTTC1740.14226728261313928No Hit
CATAGAGGCAGGTGGGTAGTGGAAGGTCATTCTTCTCTGGGGGCTCTATG1720.14063202649114917No Hit
CATAGACCCCATGTGCAGTGTAAGCTACCGTAAGGGTGGGGAAAGAGAGC1720.14063202649114917No Hit
CATAGATGCTTCTGATATGTTGCCGTAAGAACAGCTAAAAATCTTGGAGC1680.13736151424716897No Hit
CATAGATGTGGTCTCAGTGCCCTATGACACTGACGACATGTGTGAGAGGG1620.13245574588119866No Hit
CATAGAGCAGCCATAGATAATTAATACACTTCTATGGCTCACACCTATAA1550.12673234945423328No Hit
CATAGATGGAAATTTTTGGCCAGGCGCAATGGCTCACACCTATAATCCCA1550.12673234945423328No Hit
CATAGACAGCTGGGGTGGGAGGTTAGATCTCCCTCATTATCCCTGTGCCT1520.1242794652712481No Hit
CATAGAGCAGCCATAGATAATTAATACACTTCTTACGGAGATAGAGAGGT1510.12346183721025304No Hit
CATAGACGGGCCAGAGAATAGTGCTAGGGTGGGGAAAGAGAGCACTCTAT1500.12264420914925801No Hit
CATAGACCACCGTGCCCAGATAAGTTTTTTGTATTTTTGGTAGAGACAGG1480.1210089530272679No Hit
CATAGAATACAACACACTCTCTGCCCTGTGCCTCTTGTAGAAGGGATGGT1470.12019132496627284No Hit
CATAGACCCCATGTGCAGTGTAAGCTATACAGTGAAACAAGATCGTGCCT1390.1136503004783124No Hit
CATAGACTAATAGCCTCCCAAAGATTCCTGATGTGCCTCTTGTAGAAGGG1390.1136503004783124No Hit
CATAGACTCTGTTTTGCTACCTGGGGTGGGGAAAGAGAGCACTCTATGAG1380.11283267241731737No Hit
CATAGAAGGAGCTGGACTGGATGGAGACAGCCGCTCACCTCTATGAGACC1360.11119741629532726No Hit
CATAGAAGAGTGTGCTGTGTCTTCCGTATGGAGACAGCCGCTCACCTCTA1340.10956216017333714No Hit
CATAGAGCCTCCACTCTTCTCGCTATCGTAGGAGAGGAGGGGGCAGAATA1340.10956216017333714No Hit
CATAGATGTGGTCTCAGTGCCCTATGACAGTGAAACAAGATCGTGCCTCT1330.10874453211234208No Hit
CATAGAGCCTCCACTCTTCTCGCTATCGTAAGAATTTGCAAATACAGAAT1310.107109275990352No Hit
CATAGAGAACAGCCCTGAGAGAATGCACATCTACAAGGACACTCATCTAT1310.107109275990352No Hit
CATAGATGCTTCTGATATGTTGCCGTATAGATGCTCAGATCTCAAAAGGC1270.10383876374637177No Hit
CATAGAAGAGTGTGCTGTGTCTTCCGTGTAGAACAGCTAAAAATCTTGGA1240.10138587956338661No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)