FastQCFastQC Report
Wed 28 Jun 2023
EGAF00005804468

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005804468
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences25096
Sequences flagged as poor quality0
Sequence length150
%GC48

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
CATAGATCATGGGACTTCAGCATGGCGGTGTTTGCAGATTTGGACCTGCG1214048.374242907236216No Hit
CATAGAGAATTTGCACACCACGGGACATGGATGAAGCTGGATCTATGAGA6732.681702263308894No Hit
CATAGACCACACCCAAACACCACGTACACTGACGACATGGTTCTACACAT4961.976410583359898No Hit
CATAGATGTCTCCCAGGCTAGAGTGAGCCCTTGTCCCTTTCTATGAGACC3281.3069811922218681No Hit
CATAGATCTGTGGCTCCCGATAAATGTACACTGACGACATGGTTCTACAC3261.2990117947083202No Hit
CATAGACACTGATAGGTTCCAACTTTCCTGGGTGAGAAATGATGATGGCT2310.9204654128147912No Hit
CATAGATCATGGGACTTCAGCATGGTGGGTGCCTGATTGTTCTATGAGAC2090.8328020401657634No Hit
CATAGACACTGATAGGTTCCAACTTTCCTGGGAGAGGCTGTTTGAGATCT2050.8168632451386675No Hit
CATAGATTAGTTCTTATTCTTGGTATGGCACACACTGACTCTTCACTATG2020.8049091488683456No Hit
CATAGAACCCAAAGAGTGAGCAGCAGAATCAGGGTTGGTTCTATGAGACC1670.665444692381256No Hit
CATAGAACCCAAAGAGTGAGCAGCAGCACTGACGACATGGTTCTACACAT1650.6574752948677081No Hit
CATAGAACAAGGCCAGAATTACCCTGGGTGAGAAATGATGATGGCTCTAT1630.6495058973541601No Hit
CATAGAATCAAAATAGTACCCTTGCCTCTATACTTCAGTTGACTATAAGA1600.637551801083838No Hit
CATAGAGCTTCTTTCTGTTCATATTGGGCAACAGAACAACAACATCTATG1450.5777813197322282No Hit
CATAGAACAAGGCCAGAATTACCCTGGGAGAGGCTGTTTGAGATCTATGA1440.5737966209754543No Hit
CATAGAGAATTTGCACACCACGGGACCATGCTCACACCTTGATCTATGAG1440.5737966209754543No Hit
CATAGATTAGTTCTTATTCTTGGTATGGCACACTTCAGTTGACTATAAGA1380.5498884284348103No Hit
CATAGATTCTCCCTTGTGCTTTTGGTACATAGATTCTCCCTTGTGCTCAT1330.5299649346509404No Hit
CATAGAGCTTCTTTCTGTTCATATTGGGGAACAGAACAACAACATCTATG1280.5100414408670704No Hit
CATAGAGGGTGTTTTTCGGTGTTACAACCAATGCTCTTTCATCTATGAGA1170.46620975454255653No Hit
CATAGAGGGTGTTTTTCGGTGTCACACTGACGACATGGTTCTACACATAG1080.4303474657315907No Hit
CATAGATCATGGGACTTCAGCATGGCGGTGTTCGCAGATTTGGACCTGCG940.37456168313675486No Hit
CATAGAACAGACACAAATCTCAAAGCTTCTACACTGACGACATGGGCAAC870.34666879183933696No Hit
CATAGACCTTCCTGTTGGCCACACAGAATTAGCGGAGAGTGAGAACTCTA860.342684093082563No Hit
CATAGAACTATGTCAAGAGAATTTTGCACACCACGGGACATGGATGAAGC850.338699394325789No Hit
CATAGAGCTATCAGTATACTCCCACCATGAGACCAAGTCTACTTCAGTTG810.32276059929869305No Hit
CATAGAGAAGAGAAGGCGACAATGGCATGTGTAAGTATCACTGTGGGGGC810.32276059929869305No Hit
CATAGATCTGTGGCTCCCGATAAATGTGCTCATACAGAATTAGATCTAGC810.32276059929869305No Hit
CATAGAACAGACACAAATCTCAAAGCTTCTGGGTGAGAAATGATGATGGC790.314791201785145No Hit
CATAGAGCTATCAGTATACTCCCACCATGACGACATGGTTCTACACATAG790.314791201785145No Hit
CATAGAGGGTGTTTTTCGGTGTCACAACCAATGCTCTTTCATCTATGAGA750.2988524067580491No Hit
CATAGACTTGATGCCCAGGAAACCTCCTGCCCCTGCAGGCTGAAAGTGCC700.27892891297417916No Hit
CATAGAACAGACACAAATCTCAAAGCTTCTGGCCCTGAGGAATTCTTGCC690.27494421421740517No Hit
CATAGAGCAAAAGAGAAACATTAAGCCATAGTACACTGACGACATGGTGG670.2669748167038572No Hit
CATAGAATGCAGGAGAATATACACAGGTTACACTGACGACATGGTGGGTG640.2550207204335352No Hit
CATAGATCATGGGACTTCAGCATGGCGGCGTTTGCAGATTTGGACCTGCG640.2550207204335352No Hit
CATAGATCATGGGACTTCAGCATGGCGGTGTCTGCAGATTTGGACCTGCG620.24705132291998724No Hit
CATAGATCTTTGGTAGATATGGGGTCTCCCAGGCCTGAGATTGCTGCTAT620.24705132291998724No Hit
CATAGACAGCTCACAGACTGCATACTACACTGACGACATGGTGGGTGCCT580.23111252789289127No Hit
CATAGATCATGGGACTTCAGCATGGCGGTGTTTGCAGATTCGGACCTGCG560.22314313037934333No Hit
CATAGAACAGACACAAATCTCAAAGCTTCTACACTGATCTGAGCAAGGAT540.21517373286579536No Hit
CATAGATTCTCCCTTGTGCTTTTGGTACACTGACGACATGGTGGGTGCCT540.21517373286579536No Hit
CATAGACTTGATGCCCAGGAAACCTCACACTGACGACATGGTGGGTGCCT520.2072043353522474No Hit
CATAGATCATGGGACTTCAGCATGGCGGTGTTTGCAGATCTGGACCTGCG510.2032196365954734No Hit
CATAGATCATGGGACTTCAGCATGGCGGTGTTTACAGATTTGGACCTGCG510.2032196365954734No Hit
CATAGATTAGTTCTTATTCTTGGTATGGCACATATACACAATGGAATACT510.2032196365954734No Hit
CATAGAACCCAAAGAGTGAGCAGCAGAGTGAGCCCTTGTCCCTTTCTATG500.19923493783869942No Hit
CATAGAGCAAAAGAGAAACATTAAGCCATAGTGTAGAATTAGCGGAGAGT500.19923493783869942No Hit
CATAGATCATGGGACTTCAGCATGGCGGTGCTTGCAGATTTGGACCTGCG500.19923493783869942No Hit
CATAGAGGGTGTTTTTCGGTGTCACACACTGACGACATGGTTCTACACAT490.1952502390819254No Hit
CATAGAACAGACACAAATCTCAAAGCTTCTACACTACGACATGGGCAACA490.1952502390819254No Hit
CATAGATCATGGGACTTCAGCATGGCGGTGTTTGCAGATTTGGACCCGCG490.1952502390819254No Hit
CATAGACTTGATGCCCAGGAAACCTCACACTGACGACTCTTCACTATGTC470.18728084156837743No Hit
CATAGATTAGTTCTTATTCTTGGTATGGCACACTGACGACATGGTGGGTG460.18329614281160345No Hit
CATAGAACAGACACAAATCTCAAAGCTTCTACACTGAGGAATTCTTGCCA460.18329614281160345No Hit
CATAGATCATGGGACTTCAGCATGGTGGTGTTTGCAGATTTGGACCTGCG460.18329614281160345No Hit
CATAGATCATGGGACTTCAGCATGGCGGTGTTTGCGGATTTGGACCTGCG430.1713420465412815No Hit
CATAGAACCCAAAGAGTGAGCAGCAGCTGACGACATGGTTCTACACATAG420.1673573477845075No Hit
CATAGACACTGATAGGTTCCAACTTTCCTGGGCAACAGAACAACAACATC420.1673573477845075No Hit
CATAGATCATGGGACTTCAGCATGGCGGTGGTTGCAGATTTGGACCTGCG410.16337264902773352No Hit
CATAGATCATGGGACTTCAGCATGGCGGTGTTTGCAGATTTGGGCCTGCG400.1593879502709595No Hit
CATAGATCATGGGACTTCAGCATGGCGGTGTTTGCAGACTTGGACCTGCG400.1593879502709595No Hit
CATAGAACCCAAAGAGTGAGCAGCAGACACTGACGACATGGTTCTACACA400.1593879502709595No Hit
CATAGATCATGGGACTTCAGCATGGCGGTGTTTGCAGATTTGGACCTGTG390.15540325151418552No Hit
CATAGAACCCAAAGAGTGAGCAGCAGACGACATGGTTCTACACATAGAAC370.14743385400063755No Hit
CATAGACTTGATGCCCAGGAAACCTCACTTCAGTTGACTATAAGAAACAC360.14344915524386356No Hit
CATAGACAGCTGACCAGAAAATGTTTCAGTGTAGAATTAGCGGAGAGTGA350.13946445648708958No Hit
CATAGACAGGAGGAGGAAGAAGAGGAATTCTTGCCAGGGATCTATGAGAC350.13946445648708958No Hit
CATAGAACAATGTAATAAGCATCGGAGGACACTGACGACATGGTTCTACA340.1354797577303156No Hit
CATAGATCATGGGACTTCAGCATGGCGGTGTTTGCAGGTTTGGACCTGCG340.1354797577303156No Hit
TATAGATCATGGGACTTCAGCATGGCGGTGTTTGCAGATTTGGACCTGCG320.1275103602167676No Hit
CATAGAACTATGTCAAGAGAATTTTGCACACCACGGGACCATGCTCACAC320.1275103602167676No Hit
CATAGACTTGATGCCCAGGAAACCTCATGGTGTTATTTAAAGACTTGAGA320.1275103602167676No Hit
CATAGATCATGGGACTTCAGCATGGCGGTGTTTGCAGATTTGGACCTGCA300.11954096270321962No Hit
CATAGATCGTGGGACTTCAGCATGGCGGTGTTTGCAGATTTGGACCTGCG290.11555626394644564No Hit
CATAGAGCTATCAGTATACTCCCACCATGAAATACTATGCAGCCGTAAAA280.11157156518967166No Hit
CATAGAGCTATCAGTATACTCCCACCATGAGAATTAGCGGAGAGTGAGAA280.11157156518967166No Hit
CATAGAGAAGAGAAGGCGACAATGGCGAGCAGATCAGGCTGGATAGTACT270.10758686643289768No Hit
CATAGACAGCTCACAGACTGCATACTACACTGGAGACAGCCGCTCACCTC270.10758686643289768No Hit
CATAGAACCCAAAGAGTGAGCAGCAGTTCTACACATAGAACCCAAAGAGT260.1036021676761237No Hit
CATAGAACCCAAAGAGTGAGCAGCAGAACCCAAAGAGTGAGCCCTTGTCC260.1036021676761237No Hit
CATAGAACCCAAAGAGTGAGCAGCAGCAAGATTTATTGCAAAAAGTGAAA260.1036021676761237No Hit
CATAGAACCCAAAGAGTGAGCAGCAGAGAGTGAGCCCTTGTCCCTTTCTA260.1036021676761237No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)