FastQCFastQC Report
Wed 28 Jun 2023
EGAF00005804470

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005804470
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences85072
Sequences flagged as poor quality0
Sequence length150
%GC40

[OK]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
CATAGATCATGGGACTTCAGCATGGCGGTGTTTGCAGATTTGGACCTGCG1602418.83580966710551No Hit
CATAGATCACCCAGCCCATATTGCACATCTACAAGGACACTCATCTATGA50595.946727477901072No Hit
CATAGAGTCTGGAGGAAGGTGTCAGCCTCCAGACTCAACCCTTCTATGAG42264.967556892984766No Hit
CATAGAGGATCCCCTGACATTTTGGTTGCCTTTCCTCAGTTCTTTTTCTA28223.317190144818507No Hit
CATAGATCGGTAAGGAATTTGGCTAGAGGACACTTTGGACTCTGCCTCTA26233.083270641339101No Hit
CATAGAACAGTAAGTCAGCTCCTCCTCTAACTTCATAGCACATCATGTCT20672.4297066014669926No Hit
CATAGAACAGTCAAATCTCCGAGTAAACAGAACAGCTAAAAATCTTGGAG16631.9548147451570435No Hit
CATAGAGGCAGGTGGGTAGTGGAAGGTGCAGCAACAAAAGTCACTCCTCT16211.9054447996990784No Hit
CATAGATGGAAATTTTTGGCCAGGCGCGGTGGCTCACACCTATAATCCCA15941.873706977618958No Hit
CATAGATGGAAATTTTTGGCCAGGCGCAGTGGCTCACACCTATAATCCCA15781.854899379349257No Hit
CATAGAACAGTAAGTCAGCTCCTCCTTGGAGAGAAATGCTGCTCTATGAG15191.785546360729735No Hit
CATAGAAATCTGCAACAATATCATTCTCCTCTAACTTCATAGCACATCAT13311.5645570810607485No Hit
CATAGAATACAACACACTCTCTGCCCTGCACATCTACAAGGACACTCATC12791.5034323866842205No Hit
CATAGAAGTGACCCTCAGCTCAGTGAAACAAGATCGTGCCTCTATGAGAC12531.4728700394959564No Hit
CATAGATGGAAATTTTTGGCCAGGCGTGGTGGCTCACACCTATAATCCCA10141.1919315403422983No Hit
CATAGACTAATAGCCTCCCAAAGATTCCTATAGACCAAAGCTAGAAACTC9471.1131747225879256No Hit
CATAGAGGCAGGTGGGTAGTGGAAGGGTAATGGAGGAGTATGGGATCTAT9391.103770923453075No Hit
CATAGATGTGCCACATACCTTTCCCAGGACACTTTGGACTCTGCCTCTAT9211.0826123753996615No Hit
CATAGATGCCTCAAAGAGCTGAAGACAGCCGCTCACCTCTATGAGACCAA8981.0555764528869664No Hit
CATAGAATACAACACACTCTCTGCCCTGTTCACTCTGATGGTACTTCTAT8791.0332424299416965No Hit
CATAGACTCTGTTTTGCTACCTGGGGCACATAGAACAGCTAAAAATCTTG8360.9826970095918751No Hit
CATAGAGGCAGGTGGGTAGTGGAAGGGTGGGGAAAGAGAGCACTCTATGA8310.9768196351325935No Hit
CATAGACTAATAGCCTCCCAAAGATTCCTCTAACTTCATAGCACATCATG7940.9333270641339101No Hit
CATAGACAGCTGGGGTGGGAGGTTAGGGTGGGGAAAGAGAGCACTCTATG7790.9156949407560655No Hit
CATAGAGGCAGGTGGGTAGTGGAAGGTGTCAGCCTCCAGACTCAACCCTT7710.9062911416212149No Hit
CATAGATGCCTCAAAGAGCTGGAGACAGCCGCTCACCTCTATGAGACCAA6550.7699360541658831No Hit
CATAGAAGGAGCTGGACTGGATGGACTGGTGGAGGGCTTTGCTGTTTCTA6530.7675851043821704No Hit
CATAGATCACTTGACTACAGAAAAAGGTCTGCTGAGATTGGCCTGTGTCT5520.6488621403046831No Hit
CATAGAAATCTGCAACAATATCATTCTCCTCGAGGCAGAGGACAGGTATC5430.6382828662779763No Hit
CATAGAACATCTACAGAACTCTCTACCCAGGTGCAAATTGTCAGTGTGTC5290.621826217791988No Hit
CATAGAACATCTACAGAACTCTCTACCCACCTGCCTCTTGTAGAAGGGAT4810.565403422982885No Hit
CATAGAGAACAGCCCTGAGAGAATGCAGAGAACAGCTAAAAATCTTGGAG4410.5183844273086327No Hit
CATAGACCACCGTGCCCAGATAAGTTTTGTAGTTTTGGTAGAGACAGGGT4230.4972258792552191No Hit
CATAGAGAACAGCCCTGAGAGAATGCTGCAACAGAGAAGTCAAGAGGAAA4130.48547113033665606No Hit
CATAGATGCTTCTGATATGTTGCCGTAGATGCTCAGATCTCAAAAGGCTT4020.4725409065262366No Hit
CATAGAATACAACACACTCTCTGCCCTGATGGTTCTGCACATCTACAAGG3850.4525578333646793No Hit
CATAGAAGGAGCTGGACTGGATGGACTACAAGTACCCACCACCTCTATGA3700.43492570998683466No Hit
CATAGAGCCTCCACTCTTCTCGCTATCGTAACAGTGAAACAAGATCGTGC3510.4125916870415648No Hit
CATAGAGGCAGGTGGGTGGTGGAGGGCTTTGCTGTTTCTATGAGACCAAG3230.37967839006958815No Hit
CATAGATCGGTAAGGAATTTGGCTAGAGGGTAATGGAGGAGTATGGGATC3200.3761519653940192No Hit
CATAGACCACCGTGCCCAGATAAGTTTTGTATTTTTGGTAGAGACAGGGT2990.35146699266503667No Hit
CATAGAGAACAGCCCTGAGAGAATGCACATAGAGAACAGCTAAAAATCTT2910.3420631935301862No Hit
CATAGAGGCAGGTGGGTAGTGGAAGGCTTTGCTGTTTCTATGAGACCAAG2800.3291329697197668No Hit
CATAGATCACCCAGCCCATATTGCACAACTGGCATCTGGTGATCTATGAG2770.3256065450441979No Hit
CATAGAGCTTTAAGACCTGTCAGTGACCTCTAACTTCATAGCACATCATG2750.32325559526048525No Hit
CATAGACCACCGTGCCCAGATAAGTTTTGGTACTTTTGGTAGAGACAGGG2650.3115008463419221No Hit
CATAGAACAGTAAGTCAGCTCCTCCTTACACATAGAACAGCTAAAAATCT2230.26213090088395713No Hit
CATAGAACAGTCAAATCTCCGAGTAAACAGAAGCAAACTAACACAGAAAC2230.26213090088395713No Hit
CATAGATCACCCAGCCCATATTGCACATCTACAAGGACACTTTGGACTCT2140.25155162685725035No Hit
CATAGAATACAACACACTCTCTGCCCTGCTGAGATTGGCCTGTGTCTATG2050.24097235283054352No Hit
CATAGATGTGGTCTCAGTGCCCTATGAGACCAAGTCCTGCTACAGTGAAA2030.2386214030468309No Hit
CATAGAAGTGACCCTCAGCTCAGTGAACTCAAGGTCCAGTGAACTCAAGG2020.2374459281549746No Hit
CATAGAATACAACACACTCTCTGCCCTGTGCCTCTTGTAGAAGGGATGGT1950.22921760391198046No Hit
CATAGACTCTGTTTTGCTACCTGGGGTGGGGAAAGAGAGCACTCTATGAG1930.22686665412826784No Hit
CATAGACTAATAGCCTCCCAAAGATTCCTGTGCCTCTTGTAGAAGGGATG1890.2221647545608426No Hit
CATAGAACAGTCAAATCTCCGAGTAAACAGAATTTGCAAATACAGAATCA1780.20923453075042314No Hit
CATAGACCACCGTGCCCAGATAAGTTTTTGTATTTTTGGTAGAGACAGGG1760.20688358096671056No Hit
CATAGATGGAAATTTTTGGCCAGGCGCGATGGCTCACACCTATAATCCCA1710.201006206507429No Hit
CATAGATGTGGTCTCAGTGCCCTATGAACAGTGAAACAAGATCGTGCCTC1680.19747978183186007No Hit
CATAGAACATCTACAGAACTCTCTACCCACCACCAGACCAAAGCTAGAAA1670.19630430694000375No Hit
CATAGAGAACAGCCCTGAGAGAATGCGGTTCTACACATAGAGAACAGCTA1610.1892514575888659No Hit
CATAGACCACCGTGCCCAGATAAGTTTTTTGTATTTTTGGTAGAGACAGG1600.1880759826970096No Hit
CATAGAGAACAGCCCTGAGAGAATGCTGGTTCTACACATAGAGAACAGCT1550.18219860823772804No Hit
CATAGACCACCGTGCCCAGATAAGTTGCCTTTCCTCAGTTCTTTTTCTAT1530.1798476584540154No Hit
CATAGAAATCTGCAACAATATCATTCTCCTCTATGAGACCAAGTCTCTGC1390.16339100996802708No Hit
CATAGATGCTTCTGATATGTTGCCGTTGCCTTTCCTCAGTTCTTTTTCTA1390.16339100996802708No Hit
CATAGAGGCAGGTGGGTAGTGGAAGGACACTTTGGACTCTGCCTCTATGA1320.15516268572503292No Hit
CATAGATCACCCAGCCCATATTGCACGAGCTTGGTGGAGGGCTTTGCTGT1270.14928531126575137No Hit
CATAGAGCAGCCATAGATAATTAATACACTTCTACACTGACGACATGTGT1260.14810983637389505No Hit
CATAGACTCTGTTTTGCTACCTGGGGACACGGACTACAAGTACCCACCAC1240.14575888659018243No Hit
CATAGATGCTTCTGATATGTTGCCGTATATGTTGCCTTTCCTCAGTTCTT1160.13635508745533195No Hit
CATAGAATACAACACACTCTCTGCCCTGACACGGACTACAAGTACCCACC1160.13635508745533195No Hit
CATAGAGAACAGCCCTGAGAGAATGAGAACAGCTAAAAATCTTGGAGCTC1120.1316531878879067No Hit
CATAGAAGGAGCTGGACTGGATGGACCTAGAGGCTATTACACTTAGCAAA1120.1316531878879067No Hit
CATAGAGCTTTAAGACCTGTCAGTGACCCTCAGCACAGTGAAACAAGATC1100.12930223810419408No Hit
CATAGAAATCTGCAACAATATCATTCTCCTCCCTCATTATCCCTGTGCCT1090.1281267632123378No Hit
CATAGAACAGTCAAATCTCCGAGTAAACAGATCGTGCCTCTTGTAGAAGG1000.11754748918563099No Hit
CATAGAACAGTCAAATCTCCGAGTAAACAGAAAGCAAACTAACACAGAAA1000.11754748918563099No Hit
CATAGAAATCTGCAACAATATCATTCTCCTCTCAGTTGTGTGTGTGGTCT930.10931916494263683No Hit
CATAGATCATGGGACTTCAGCATGGCGGTGTTCGCAGATTTGGACCTGCG930.10931916494263683No Hit
CATAGAGGCAGGTGGGTAGTGGAAGGTGGGCAGGCCCAGGCCTCGGGCGC930.10931916494263683No Hit
CATAGATTTGTGTGAGAAGGAGCAAGATCGTGCCTCTTGTAGAAGGGATG920.1081436900507805No Hit
CATAGAGCAGCCATAGATAATTAATACACTTCTACAAGGACACTTTGGAC890.10461726537521157No Hit
CATAGAGAACAGCCCTGAGAGAATGCTACACATAGAGAACAGCTAAAAAT880.10344179048335528No Hit
CATAGAAGGAGCTGGACTGGATGGACCTGGAAGCCATTATCCTAAGCAAA870.10226631559149897No Hit
CATAGATGTGGTCTCAGTGCCCTATGAGACCAACAGTGAAACAAGATCGT870.10226631559149897No Hit
CATAGAGCTTTAAGACCTGTCAGTGACCCTCAGTCCAGTGAACTCAAGGG860.10109084069964266No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)