FastQCFastQC Report
Wed 28 Jun 2023
EGAF00005804473

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005804473
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences919353
Sequences flagged as poor quality0
Sequence length150
%GC40

[WARN]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
CATAGAGGTGAGCGGCTGTCTCCACAAGTCCGCGCAGAGCCTTCAGGTCA898109.76882655519697No Hit
CATAGATCCAGCTTCATCCATGTCCCGTGGTGTGCAAATTCTCTATGTGT724307.878366633926251No Hit
CATAGAAAGGGACAAGGGCTCACTCTAGCCTGGGAGACATCTATGTGTAG516775.621018259580379No Hit
CATAGAACCAACCCTGATTCTGCTGCTCACTCTTTGGGTTCTATGTGTAG395494.3018296562908915No Hit
CATAGAACAATCAGGCACCCACCATGCTGAAGTCCCATGATCTATGTGTA323843.5224772203930375No Hit
CATAGATCTCAAACAGCCTCTCCCAGGGTAATTCTGGCCTTGTTCTATGT266872.9028022968326637No Hit
CATAGAGCCATCATCATTTCTCACCCAGGAAAGTTGGAACCTATCAGTGT242392.636528080073704No Hit
CATAGATGAAAGAGCATTGGTTGTAACACCGAAAAACACCCTCTATGTGT211942.305316891335537No Hit
CATAGATCTCAAACAGCCTCTCCCAGGAAAGTTGGAACCTATCAGTGTCT205382.2339623626615674No Hit
CATAGATCAAGGTGTGAGCATGGTCCCGTGGTGTGCAAATTCTCTATGTG199182.166523631292877No Hit
CATAGATGTTGTTGTTCTGTTGCCCAATATGAACAGAAAGAAGCTCTATG191272.0804848627241115No Hit
CATAGATGTTGTTGTTCTGTTCCCCAATATGAACAGAAAGAAGCTCTATG148851.6190734135854237No Hit
CATAGATGAAAGAGCATTGGTTGTGACACCGAAAAACACCCTCTATGTGT144461.571322440890496No Hit
CATAGAGTTCTCACTCTCCGCTAATTCTGTGTGGCCAACAGGAAGGTCTA141071.5344486829324535No Hit
CATAGATGCCAAGAAGAGAAAAGCAGCCATTGTCGCCTTCTCTTCTCTAT139471.5170451393534365No Hit
CATAGAGATCTTCTCGGCTTAGCGGCCATTGTCGCCTTCTCTTCTCTATG137461.4951819377322964No Hit
CATAGATCCCTGGCAAGAATTCCTCTTCTTCCTCCTCCTGTCTATGTGTA123951.348230766636972No Hit
CATAGAGCCATCATCATTTCTCACCCAGGGTAATTCTGGCCTTGTTCTAT108231.17724095097313No Hit
CATAGATGTTGTTGTTCTGTTGCCCATGTCGTCAGTGTAGAAGCTTTGAG93961.0220230966777721No Hit
CATAGAGGGCTATCCTTGCTCAGATCAGGAAAGTTGGAACCTATCAGTGT85360.928479049940556No Hit
CATAGAAAGGGACAAGGGCTCACTCTGCTGCTCACTCTTTGGGTTCTATG77140.8390683448033562No Hit
CATAGATCCAGCTTCATCCATGTCCCGTGGTGTGCAAAATTCTCTTGACA76010.8267770921506755No Hit
CATAGAACAATCAGGCACCCACCATGTCGTCAGTGTAGTATGCAGTCTGT67490.73410322259241No Hit
CATAGAAAGGGACAAGGGCTCACTCTTTGGGTTCTATGTGTAGAACCATG63670.6925522622975071No Hit
CATAGAGGTGAGCGGCTGTCTCCAGGAAAGTTGGAACCTATCAGTGTCTA62110.6755838073079655No Hit
CATAGAGCCATCATCATTTCTCACCCAGAAGCTTTGAGATTTGTGTCTGT61320.6669908076658259No Hit
CATAGATAGCAGCAATCTCAGGCCTGGGAGACCCCATATCTACCAAAGAT58010.6309872268867345No Hit
CATAGAGGTGTTTCTTATAGTCAACTGAAGTTACGGTAGCAGGAAAGTTG55990.6090152531182255No Hit
CATAGAACAATCAGGCACCCACCATGTCGTCAGTGTCAGGAAAGTTGGAA50610.5504958378337809No Hit
CATAGAGGGCTATCCTTGCTCAGATCAGTGGAGGTTTCCTGGGCATCAAG49740.5410326610126904No Hit
CATAGAACAATCAGGCACCCACCATGTCAGGTAAACAAACTTCTGGCCCT45970.5000255614546317No Hit
CATAGAGTTCTCACTCTCCGCTAATTCTTACGGAGGCTGAAACTCTAAGG44540.48447114438088523No Hit
CATAGATCCCTGGCAAGAATTCCTCAGTGTACCAAAAGCACAAGGGAGAA44190.48066411922297525No Hit
CATAGAACAATCAGGCACCCACCATGTACGGTACGTGGTGTTTGGGTGTG41120.44727106998073646No Hit
CATAGATCCAGCTTCATCCATGTCCCAGTGTAACCTGTGTATATTCTCCT40730.4430289562333511No Hit
CATAGATCAAGGTGTGAGCATGGTCCCGTGGTGTGCAAAATTCTCTTGAC38810.4221447039385307No Hit
CATAGAGGGCTATCCTTGCTCAGATCACATTTATCGGGAGCCACAGATCT38080.4142043371806041No Hit
CATAGAGTTCTCACTCTCCGCTAATTCTACGGTAGCAGAAGCTTTGAGAT35310.38407445235943105No Hit
CATAGAAAGGGACAAGGGCTCACTCTCTGCTGCTCACTCTTTGGGTTCTA34720.37765689566466853No Hit
CATAGATGTTGTTGTTCTGTTGCCCATGTCGTCAGTGTACCAAAAGCACA33220.3613410735593401No Hit
CATAGAGCTAGATCTAATTCTGTATGAGCACAGTGTAGAGGCAAGGGTAC32710.35579369404352845No Hit
CATAGAACAATCAGGCACCCACCATGTCGTCAGTGTACCAAAAGCACAAG31410.34165331488557715No Hit
CATAGATCCCTGGCAAGAATTCCTCATAGCAGAGACTTGGTCTCATAGAT31050.3377375175802983No Hit
CATAGAAAGGGACAAGGGCGCACTCTAGCCTGGGAGACATCTATGTGTAG29900.3252287206328799No Hit
CATAGATGTTGTTGTTCTGTTGCCCATACGGTAGCAGAAGCTTTGAGATT27420.29825322808540355No Hit
CATAGAAAGGGACAAGGGCTCACTCTTTGGGTTCTGCTGCTCACTCTTTG26390.28704969690641136No Hit
CATAGAGGCGAGCGGCTGTCTCCACAAGTCCGCGCAGAGCCTTCAGGTCA24720.2688847482958124No Hit
CATAGAAAGGGACAAGGGCTCACTCTTTGGGCTGCTGCTCACTCTTTGGG20550.22352676284299938No Hit
CATAGATCTAGCTTCATCCATGTCCCGTGGTGTGCAAATTCTCTATGTGT19450.21156182663242518No Hit
CATAGAACTGAAACTAGGAAACATGTCTGAGTGTCATGGTGGGAGTATAC19220.2090600672429415No Hit
CATAGAACAATCAGGCACCCACCATGTCGTCAGTGTAGGTAAACAAACTT19190.20873375080083492No Hit
CATAGAGATCTTCTCGGCTTAGCGGCAGGAAAGTTGGAACCTATCAGTGT18870.20525304208503153No Hit
CATAGATCCAGCTTCATCCATGTCCCGTGGTGTGCAAATTCTCTATGTGC18740.20383900416923642No Hit
CATAGATCCCTGGCAAGAATTCCTCAATATGAACAGAAAGAAGCTCTATG18040.19622495385341648No Hit
CATAGAGCTAGATCTAATTCTGTATGAGCACTCTAGCCTGGGAGACATCT17020.18513019482179316No Hit
CATAGATCCAGCTTCATCCATGTCCCGACCAAAAGCACAAGGGAGAATCT16150.17566701800070267No Hit
CATAGATCAAGGTGTGAGCATGGTCCCACATACGTGGTGTTTGGGTGTGG16110.17523192941122726No Hit
CATAGATGTTGTTGTTCTGTTGCCCACTCTTTGGGTTCTATGTGTAGAAC15290.16631261332698102No Hit
CATAGAGGTGAGCGGCTGTCTCCAGTGTGGAGACCCCATATCTACCAAAG15270.16609506903224333No Hit
CATAGAACTGAAACTAGGAAACATGTCTGAGGCTGAAACTCTAAGGGTCT15220.16555120829539904No Hit
CATAGATCCCTGGCAAGAATTCCCCAATATGAACAGAAAGAAGCTCTATG15020.16337576534802192No Hit
CATAGAACAATCAGGCACCCACCATGTCGTCAGTGTGTGCAAAATTCTCT14920.16228804387433338No Hit
CATAGATCCAGCTTCATCCATGTCCCATTGTCGCCTTCTCTTCTCTATGT13980.15206346202166088No Hit
CATAGAACAATCAGGCACCCACCATGTCGTCAGTGTGTGCCATACCAAGA12670.13781431071634073No Hit
CATAGACAAGCCTGCCAAGACCTCTCACACTGACGACATTTATCGGGAGC11820.12856867818998796No Hit
CATAGAAAGGGACAAGGGCTCACTCTAGCCTGGGAGACCCCATATCTACC11670.12693709597945513No Hit
CATAGAAAGGGACAAGGGCTCACTCTTTGGGTTCTACTGCTGCTCACTCT10490.11410198258993008No Hit
CATAGAACTAACCCTGATTCTGCTGCTCACTCTTTGGGTTCTATGTGTAG10170.11062127387412671No Hit
CATAGATGTTGTTGTTCTGCTGCTCACTCTTTGGGTTCTATGTGTAGAAC9610.10453003362147074No Hit
CATAGAGCTAGATCTAATTCTGTATGAGCACAAGGGAGAATCTATGTGTA9450.10278967926356905No Hit
CATAGAGGTGAGCGGCTGTCTCCATACGGTAGCAGAGGCAAGGGTACTAT9420.10246336282146248No Hit
CATAGAACAATCAGGCACCCACCATGGTGGGAGTATACTGATAGCTCTAT9400.10224581852672476No Hit
CATAGAAAGGGACAAGGGCTCACTCTTCTGCTGCTCACTCTTTGGGTTCT9200.10007037557934766No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)