FastQCFastQC Report
Wed 28 Jun 2023
EGAF00005804477

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005804477
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences101058
Sequences flagged as poor quality0
Sequence length150
%GC35

[FAIL]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
CATAGATCTCACAGAAACTTCCTTGATGTTCGCACCCAAGCTCTATGTGT1060010.489026103821567No Hit
CATAGAGGGGCCTGGTTATTACTTGGAGGCTGGAGAAAAAGCTCTATGTG76227.542203487106414No Hit
CATAGATTCTTTCCTGGCTGTGGGTGGGTTGAGGGAGTCTTCTCTATGTG60926.028221417403867No Hit
CATAGAAGGAACAGCAGAGAGGGCAGGCCCTTCAGCATCATTTCTATGTG52755.219774782797997No Hit
CATAGAGCTCATTCAACTAATAACTGGTAGACCATGGAGAGAATAATCCG49634.911041184270419No Hit
CATAGAATCTGGTTCAAGCACACAGTTGTGGAAAGTGCAATGAGTCTATG38243.783965643491856No Hit
CATAGAAGTATTCACACTGGGGCCCAGAACCCATTGTAGATTTCTTTCAC35563.5187713986027824No Hit
CATAGAGCTAATAAAGACATACCTGAGCCATGCTGAAGTCCCATGATCTA34123.3762789685131316No Hit
CATAGATGGGACAGCGACAATGACAGTTGTGGAAAGTGCAATGAGTCTAT26052.577727641552376No Hit
CATAGATCTAGCCCATCACTTCAGCAGGCCCTTCAGCATCATTTCTATGT20071.9859882443745174No Hit
CATAGATCTCACAGAAACTTCCTTGATGAGCATGCCTTTGATAAAACATC18271.8078727067624534No Hit
CATAGAACACGAAGATTTCAGATTAGCCTCTCCAGTTTCTACGTGATCTA17981.7791763145916204No Hit
CATAGATGAAGGCAGAAAAGGAAGAACAACAACAAAACTCGTGACTTCTA17861.7673019454174832No Hit
CATAGATCTAGCCCATCACTTCAGCATCATTTCTATGTGTAGAACCATGT15851.5684062617506778No Hit
CATAGAAATTTTTCAGAGACAGTTGGGACAGTTGTGGAAAGTGCAATGAG15481.5317936234637535No Hit
CATAGAGGTGAGCGGCTGTCTCCACAAGTCCGCGCAGAGCCTTCAGGTCA14491.433830077777118No Hit
CATAGACCTCCCATGGTTCCTGATGAGCATGCCTTTGATAAAACATCTAT14101.3952383779611708No Hit
CATAGAAGTATTCACACTGGGGCCCATTGTAGATTTCTTTCACCTCCTCT9110.901462526469948No Hit
CATAGATTCAGAGAAGGACAGCGTGGGCTGGTGTTTTCCTTGATCTATGT8160.8074571038413584No Hit
CATAGATCTCACAGAAACTTCCTTGATGATGGGAGTGTCTGCTGGTCTAT7670.7589700963802964No Hit
CATAGATTCAGTTTACTTAGAGGCAGACAGTTGTGGAAAGTGCAATGAGT7540.7461061964416473No Hit
CATAGATGGCAAATGGTGGGATCTCTATGTGTAGAACCATGTCGTCAGTG6870.679807635219379No Hit
CATAGATGGCCCAGAATCCTTTGTAGATTTCTTTCACTCTCCCACCATTC5860.5798650280037206No Hit
CATAGAGGCTTCCAGTCCTTTAAAATAAATGAGCATGCCTTTGATAAAAC5490.5432523897167963No Hit
CATAGAGTGTGTAGTGTGGTATAGCGTCAGTGTGGGCTGGTGTTTTCCTT5270.521482712897544No Hit
CATAGAAGGAACAGCAGAGAGGGCAGTGTACCCTGGGAGAAGAAATGTTG4600.4551841516752756No Hit
CATAGAGTGTGTAGTGTGGTATAGCGTCAGTGTTGGGCTGGTGTTTTCCT4570.4522155593817412No Hit
CATAGAAGAAGAGGGTGTGGGGAAGGGTACCCTGGGAGAAGAAATGTTGG4420.43737259791406913No Hit
CATAGAGCTCATTCAACTAATAACTGGTAGACCTAGGATTTGAGCTCATG4290.42450869797542007No Hit
CATAGAGTGTGTAGTGTGGTATAGCGTCAGTGGGGTCCTAAATGTCTTTG4280.42351916721090854No Hit
CATAGAGTGTGTAGTGTGGTATAGCGTCAGTGTATGGGTCATTGTGAGGA4020.3977913673336104No Hit
CATAGATGGGACAGCGACAATGACAGTGTGGTGGGTTGAGGGAGTCTTCT3850.3809693443369154No Hit
CATAGAGGCTGCAGTGAACAATGATCGTCAGTGTATGAGCATGCCTTTGA3560.35227295216608284No Hit
CATAGAGCAACAATGAAGGTGCATAAAAACTGTCGGAGGTCTATGTGTAG3430.3394090522274338No Hit
CATAGATTCAGAGAAGGACAGCGTGGGTTGAGGGAGTCTTCTCTATGTGT3430.3394090522274338No Hit
CATAGATGGTATTTGAGTGGGGAAACAGACACGAATGAGGAAACAGGCAC3310.32753468305329614No Hit
CATAGATGGTATTTGAGTGGGGAAACAGATGGGTCATTGTGAGGATTAAA3280.3245660907597617No Hit
CATAGACCCCATGACTCAGCTCCTCACCCTGGGAGAAGAAATGTTGGTCT3010.2978487601179521No Hit
CATAGAGCTAATAAAGACATACCTGAGCCAGTGTATGAGCATGCCTTTGA2990.29586969858892914No Hit
CATAGACCAGTTACCACAAGAAGCAATGTTGGTCTATGTACGAATGAGGA2750.27212096024065385No Hit
CATAGAGTGTGTAGTGTGGTATAGCGTACACTGTCATTGTGGGTTTTAAC2720.2691523679471195No Hit
CATAGAGGGGTAATACTTCCTACTTCTGCATTAGGAAGTCTTCTCAGCTT2610.2582675295374933No Hit
CATAGATCTAGCCCATCACTTCAGCAGCAGGCCCTTCAGCATCATTTCTA2480.24540362959884424No Hit
CATAGATGGGACAGCGACAATGACAGTGTGGGTCCTAAATGTCTTTGTCC2480.24540362959884424No Hit
CATAGAGCAACCCCAGCAGTTTGAGAAAAGATGCAGTACAGCTCTATGTG2420.23946644501177541No Hit
CATAGAGGCTGCAGTGAACAATGATCGTCAGTGTACGAATGAGGAAACAG2340.23155019889568368No Hit
CATAGAGGGGTAATACTTCCTACTTCTGCAGGCCCTTCAGCATCATTTCT2250.22264442201508045No Hit
CATAGATGGTATTTGAGTGGGGAAACAGACACTCTATGTGTAGAACCATG2100.20780146054740842No Hit
CATAGAGGGGTAATACTTCCTACTTCTGCATACGGTAGCAGGCCCTTCAG2100.20780146054740842No Hit
CATAGAACATTGATTCCTGGCATGTCAGACCCAGGCTACACATCTATGTG2070.20483286825387403No Hit
CATAGAAATTTTTCAGAGACAGTTGGGACAGTGCATAAAAACTGTCGGAG1970.19493756060875933No Hit
CATAGAGGTGAGCGGCTGTCTCCATGCTGAAGTCCCATGATCTATGTGTA1840.18207366067011024No Hit
CATAGATGGTATTTGAGTGGGGAAACAGACACTCTATGTGTAGAACGAAT1650.16327257614439233No Hit
CATAGAGCTAATAAAGACATACCTGAGCCATCTATGTGTAGAACCATGTC1650.16327257614439233No Hit
CATAGAGTGTGTAGTGTGGTATAGCGTCAGTGGACTGTTAATATAGAAGA1580.15634586079281204No Hit
CATAGAAGGAACAGCAGAGAGGGCAGTGTGGTGGGTTGAGGGAGTCTTCT1550.15337726849927763No Hit
CATAGATCTAGCCCATCACTTCAGCATCGCAGGCCCTTCAGCATCATTTC1490.14744008391220884No Hit
CATAGACCCCATGACTCAGCTCCTCACTCTCCCACCATTCAGACTCTATG1460.14447149161867442No Hit
CATAGAAGAAGAGGGTGTGGGGAAGGTGGGTTGAGGGAGTCTTCTCTATG1440.14249243008965148No Hit
CATAGAGTGTGTAGTGTGGTATAGCGTCAGTGTACAGTTGTGGAAAGTGC1440.14249243008965148No Hit
CATAGAGGGGTAATACTTCCTACTTCTGCACCGTAGCCTCTCCAGTTTCT1420.14051336856062854No Hit
CATAGATCTAGCCCATCACTTCAGCATCCAGGCCCTTCAGCATCATTTCT1390.13754477626709416No Hit
CATAGACCTCCCATGGTTCCTGATGACTTGGTCTCATAGACCTCCCATGA1390.13754477626709416No Hit
CATAGATGGCCCAGAATCCTTTGTAGAACCATGTCGTCAGTGTGACTGTT1340.1325971224445368No Hit
CATAGAGCAACCCCAGCAGTTTGAGACCATGGAGAGAATAATCCGTCTAT1160.11478556868333037No Hit
CATAGAACAACTTGCTCTAATACTTGGGAGTGGTTATAGAAAACAAGGAG1150.1137960379188189No Hit
CATAGAGCTAATAAAGACATACCTGAGCCACTATGCCTGGCCAACTGTTT1140.11280650715430743No Hit
CATAGAAGAAGAGGGTGTGGGGAAGGGCTGTGACATCACCTCTTCTCCAC1140.11280650715430743No Hit
CATAGAAGGAACAGCAGAGAGGGCAGTTGTGGAAAGTGCAATGAGTCTAT1100.10884838409626156No Hit
CATAGAGGGGTAATACTTCCTACTTCTGCATACGGTAGCAGAGACAGTTG1100.10884838409626156No Hit
CATAGATTCTTTCCTGGCTGTGGGTGCATAAAAACTGTCGGAGGTCTATG1080.1068693225672386No Hit
CATAGATCTCACCGAAACTTCCTTGATGTTCGCACCCAAGCTCTATGTGT1080.1068693225672386No Hit
CATAGAGCTCATTCAACTAATAACTGGTAGACCCATAGATGCCTGGCCAA1070.10587979180272714No Hit
CATAGAGGTGAGCGGCTGTCTCCATTCCCCAGGCATGTGCTCGTATCTTG1070.10587979180272714No Hit
CATAGAGCTAATAAAGACATACCTGAGCCATGTCGTCAGTGTACCCTGGG1040.10291119950919274No Hit
CATAGAGCAACCCCAGCAGTCTGAGAAAAGATGCAGTACAGCTCTATGTG1030.10192166874468127No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)