FastQCFastQC Report
Wed 28 Jun 2023
EGAF00005804488

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005804488
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences74304
Sequences flagged as poor quality0
Sequence length150
%GC39

[OK]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
CATAGATCATGGGACTTCAGCATGGCGGTGTTTGCAGATTTGGACCTGCG1220016.41903531438415No Hit
CATAGATCACCCAGCCCATATTGCACATCTACAAGGACACTCATCTATGA39325.291774332472007No Hit
CATAGAGTCTGGAGGAAGGTGTCAGCCTCCAGACTCAACCCTTCTATGAG38435.171996124031008No Hit
CATAGAGGATCCCCTGACATTTTGGTTGCCTTTCCTCAGTTCTTTTTCTA35094.722491386735573No Hit
CATAGATCGGTAAGGAATTTGGCTAGAGGACACTTTGGACTCTGCCTCTA24953.3578273040482345No Hit
CATAGAAATCTGCAACAATATCATTCTCCTCTAACTTCATAGCACATCAT19172.5799418604651163No Hit
CATAGATGGAAATTTTTGGCCAGGCGCGGTGGCTCACACCTATAATCCCA14972.0146963824289403No Hit
CATAGATGGAAATTTTTGGCCAGGCGCAGTGGCTCACACCTATAATCCCA14851.998546511627907No Hit
CATAGAGGCAGGTGGGTAGTGGAAGGTGCAGCAACAAAAGTCACTCCTCT14131.9016472868217054No Hit
CATAGAACAGTCAAATCTCCGAGTAAACAGAACAGCTAAAAATCTTGGAG12611.6970822566752801No Hit
CATAGAATACAACACACTCTCTGCCCTGCACATCTACAAGGACACTCATC11951.6082579672695951No Hit
CATAGAACAGTAAGTCAGCTCCTCCTTGGAGAGAAATGCTGCTCTATGAG11631.5651916451335055No Hit
CATAGATCACCCAGCCCATATTGCACAACTGGCATCTGGTGATCTATGAG10501.4131136950904393No Hit
CATAGATGGAAATTTTTGGCCAGGCGTGGTGGCTCACACCTATAATCCCA10471.409076227390181No Hit
CATAGAAGTGACCCTCAGCTCAGTGAAACAAGATCGTGCCTCTATGAGAC10061.3538975021533162No Hit
CATAGAATACAACACACTCTCTGCCCTGTTCACTCTGATGGTACTTCTAT8101.0901162790697674No Hit
CATAGAGGCAGGTGGGTAGTGGAAGGGTGGGGAAAGAGAGCACTCTATGA7971.072620585701981No Hit
CATAGAGGCAGGTGGGTAGTGGAAGGTGTCAGCCTCCAGACTCAACCCTT7741.0416666666666665No Hit
CATAGATGCCTCAAAGAGCTGAAGACAGCCGCTCACCTCTATGAGACCAA7370.991871231696813No Hit
CATAGAGGCAGGTGGGTAGTGGAAGGGTAATGGAGGAGTATGGGATCTAT5590.7523148148148148No Hit
CATAGATGTGCCACATACCTTTCCCAGGACACTTTGGACTCTGCCTCTAT5530.744239879414298No Hit
CATAGATGCTTCTGATATGTTGCCGTATAGATGCTCAGATCTCAAAAGGC5450.7334732988802756No Hit
CATAGAACAGTCAAATCTCCGAGTAAACAGACCAAAGCTAGAAACTCCCA5420.7294358311800172No Hit
CATAGACCTGTGTGTGAGGCATTGTTGGTGGAGGGCTTTGCTGTTTCTAT4620.6217700258397932No Hit
CATAGAACAGTCAAATCTCCGAGTAAACAGAATTTGCAAATACAGAATCA4520.6083118001722653No Hit
CATAGACCACCGTGCCCAGATAAGTTTTGTAGTTTTGGTAGAGACAGGGT4380.5894702842377261No Hit
CATAGAAATCTGCAACAATATCATTCTCCTCTGAAATCTGCAGCAACAAA4310.5800495262704565No Hit
CATAGATGCCTCAAAGAGCTGGAGACAGCCGCTCACCTCTATGAGACCAA4100.5517872523686477No Hit
CATAGAACAGTAAGTCAGCTCCTCCTCGAGGCAGAGGACAGGTATCTATG3590.4831503014642549No Hit
CATAGACTCTGTTTTGCTACCTGGGGATGGCTGGTTAGACCAAAGCTAGA3380.4548880275624462No Hit
CATAGACTAATAGCCTCCCAAAGATTCCTTGGAGAGAAATGCTGCTCTAT3010.40509259259259256No Hit
CATAGAGCCTCCACTCTTCTCGCTATCGTAGGGTGGGGAAAGAGAGCACT2990.40240094745908705No Hit
CATAGAGCAGCCATAGATAATTAATACACTTCTACATAGAACAGCTAAAA2960.3983634797588286No Hit
CATAGAACAGTCAAATCTCCGAGTAAACAGAGAGGGTAATGGAGGAGTAT2950.39701765719207577No Hit
CATAGAACAGTAAGTCAGCTCCTCCTCTAACTTCATAGCACATCATGTCT2830.38086778639104224No Hit
CATAGACGGGCCAGAGAATAGTGCTAGTGACTCTCAGTTGTGTGTGTGGT2700.3633720930232558No Hit
CATAGATGCTTCTGATATGTTGCCGTAGGCTGAGAAAGGAGGATCACTCT2700.3633720930232558No Hit
CATAGACCACCGTGCCCAGATAAGTTTTGTATTTTTGGTAGAGACAGGGT2680.36068044788975023No Hit
CATAGAGAACAGCCCTGAGAGAATGCTGCAGACCAAAGCTAGAAACTCCC2670.3593346253229974No Hit
CATAGATGCTTCTGATATGTTGCCGTAGGGTAATGGAGGAGTATGGGATC2600.3499138673557278No Hit
CATAGATCGGTAAGGAATTTGGCTAGAGGGTGGGGAAAGAGAGCACTCTA2600.3499138673557278No Hit
CATAGAAGGAGCTGGACTGGATGGACTACAAGTACCCACCACCTCTATGA2510.3378014642549526No Hit
CATAGACTAATAGCCTCCCAAAGATTCCTTACAGGGTGGGGAAAGAGAGC2480.33376399655469424No Hit
CATAGAAGTGACCCTCAGCTCAGTGATTGGGGATGGCTGGTTGAATCTAT2410.32434323858742464No Hit
CATAGACTCTGTTTTGCTACCTGGGGACACTGACGACATGTGTGAGAGGG2380.3203057708871662No Hit
CATAGACAGCTGGGGTGGGAGGTTAGGGTGGGGAAAGAGAGCACTCTATG2370.3189599483204134No Hit
CATAGAAGTGACCCTCAGCTCAGTGATATTGGGGATGGCTGGTTGAATCT2280.30684754521963825No Hit
CATAGATGCTTCTGATATGTTGCCGTAAGACCAAAGCTAGAAACTCCCAT2230.3001184323858742No Hit
CATAGAGGCATAGTATTGAAACTGTAGATCACGGAGATAGAGAGGTTGGT2180.2933893195521103No Hit
CATAGAGAACAGCCCTGAGAGAATGCTGCAACAGAGAAGTCAAGAGGAAA2110.28396856158484063No Hit
CATAGAAGGAGCTGGACTGGATGGACTGGTGGAGGGCTTTGCTGTTTCTA2050.27589362618432384No Hit
CATAGACCACCGTGCCCAGATAAGTTTTGGTACTTTTGGTAGAGACAGGG2040.27454780361757103No Hit
CATAGATTTGTGTGAGAAGGAGCAAGAGAGAACAGCTAAAAATCTTGGAG2020.27185615848406547No Hit
CATAGACCTGTGTGTGAGGCATTGTTGCACATCTACAAGGACACTCATCT2020.27185615848406547No Hit
CATAGATGCCTCAAAGAGCTGAAGACATGTGTGAGAGGGAAGGACTCTAT1900.25570628768303183No Hit
CATAGAGGATCCCCTGACATTTTGGTTGTCTCCCTCATTATCCCTGTGCC1900.25570628768303183No Hit
CATAGAGAACAGCCCTGAGAGAATGCACATAGAGAACAGCTAAAAATCTT1880.25301464254952627No Hit
CATAGAAGGAGCTGGACTGGATGGACCTAGAGGCTATTACACTTAGCAAA1880.25301464254952627No Hit
CATAGATGCTTCTGATATGTTGCCGTAGGGTGGGGAAAGAGAGCACTCTA1880.25301464254952627No Hit
CATAGACCACCGTGCCCAGATAAGTTTTTTGTATTTTTGGTAGAGACAGG1840.24763135228251507No Hit
CATAGACCACCGTGCCCAGATAAGTTACACGGACTACAAGTACCCACCAC1790.24090223944875105No Hit
CATAGAATACAACACACTCTCTGCCCTGTGCCTCTTGTAGAAGGGATGGT1780.2395564168819983No Hit
CATAGATGCTTCTGATATGTTGCCGTAGGAGAGGAGGGGGCAGAATATCT1760.23686477174849266No Hit
CATAGAGCTTTAAGACCTGTCAGTGACCCCATAGAACAGCTAAAAATCTT1760.23686477174849266No Hit
CATAGAAGTGACCCTCAGCTCAGTGAGGGTGGGGAAAGAGAGCACTCTAT1740.2341731266149871No Hit
CATAGAGGCAGGTGGGTAGTGGAAGGCTTTGCTGTTTCTATGAGACCAAG1730.2328273040482343No Hit
CATAGAGGCAGGTGGGTGGTGGAGGGCTTTGCTGTTTCTATGAGACCAAG1710.2301356589147287No Hit
CATAGATCACCCAGCCCATATTGCACATCTACAAGGACACTTTGGACTCT1670.2247523686477175No Hit
CATAGAGGCAGGTGGGTAGTGGAAGGACACTTTGGACTCTGCCTCTATGA1670.2247523686477175No Hit
CATAGAACAGTCAAATCTCCGAGTAAACAGAGTCTATGTGTAGAGGACAC1640.2207149009474591No Hit
CATAGACTCTGTTTTGCTACCTGGGGTGGGGAAAGAGAGCACTCTATGAG1630.2193690783807063No Hit
CATAGATGTGCCACATACCTTTCCCAGTGGAGAGGAGGGGGCAGAATATC1630.2193690783807063No Hit
CATAGATGGAAATTTTTGGCCAGGCGCGATGGCTCACACCTATAATCCCA1550.2086024978466839No Hit
CATAGATGATCCATCTACCTCTGCTTCAGTGTAGAACATTAGCTTAGTTA1510.20321920757967268No Hit
CATAGAATACAACACACTCTCTGCCCTGCCTCTTGTAGAAGGGATGGTCT1480.1991817398794143No Hit
CATAGATCGGTAAGGAATTTGGCTAGAGGGGATCTATAGGGTGGGGAAAG1450.19514427217915592No Hit
CATAGAAATCTGCAACAATATCATTCTCCTCTATGAGACCAAGTCTCTGC1450.19514427217915592No Hit
CATAGACTCTGTTTTGCTACCTGGGGCTGAGAAAGGAGGATCACTCTATG1380.1857235142118863No Hit
CATAGACCCCATGTGCAGTGTAAGCTGAGAAAGGAGGATCACTCTATGAG1360.1830318690783807No Hit
CATAGATGCTTCTGATATGTTGCCGTTATGTTGCCTTTCCTCAGTTCTTT1350.1816860465116279No Hit
CATAGATTTGTGTGAGAAGGAGCAAGATCGTGCCTCTTGTAGAAGGGATG1330.1789944013781223No Hit
CATAGAACAGTCAAATCTCCGAGTAAACAGAAGCAAACTAACACAGAAAC1310.1763027562446167No Hit
CATAGAGCAGCCATAGATAATTAATACACTTCTTTAACTTAGCAACCTGT1300.1749569336778639No Hit
CATAGAGAACAGCCCTGAGAGAATGGAGACAGCCGCTCACCTCTATGAGA1290.1736111111111111No Hit
CATAGAAATCTGCAACAATATCATTCTCCTCGAGGCAGAGGACAGGTATC1260.1695736434108527No Hit
CATAGAACATCTACAGAACTCTCTACCCAATTAACTTAGCAACCTGTACA1260.1695736434108527No Hit
CATAGAGAACAGCCCTGAGAGAATGCATAGAGAACAGCTAAAAATCTTGG1240.16688199827734712No Hit
CATAGATTTGTGTGAGAAGGAGCAAGACCAAAGCTAGAAACTCCCATCTA1220.1641903531438415No Hit
CATAGACGGGCCAGAGAATAGTGCTAGAAACTCCCATCTATGAGACCAAA1170.15746124031007752No Hit
CATAGATCGGTAAGGAATTTGGCTAGAGGAGAGGAGGGGGCAGAATATCT1150.1547695951765719No Hit
CATAGAAATCTGCAACAATATCATTCTCCTCGTCATTCTTCTCTGGGGGC1120.15073212747631354No Hit
CATAGACCACCGTGCCCAGATAAGTTTTTGTATTTTTGGTAGAGACAGGG1120.15073212747631354No Hit
CATAGAACATCTACAGAACTCTCTACCCAGGGTGGGGAAAGAGAGCACTC1120.15073212747631354No Hit
CATAGATCGGTAAGGAATTTGGCTAGAGGGTAATGGAGGAGTATGGGATC1110.1493863049095607No Hit
CATAGACAGCTGGGGTGGGAGGTTAGGAGAGGAGGGGGCAGAATATCTAT1110.1493863049095607No Hit
CATAGAAGGAGCTGGACTGGATGGAGACAGCCGCTCACCTCTATGAGACC1040.13996554694229113No Hit
CATAGACCACCGTGCCCAGATAAGTTGCCTTTCCTCAGTTCTTTTTCTAT1000.13458225667527995No Hit
CATAGACCTGTGTGTGAGGCATTGTTGCCTTTCCTCAGTTCTTTTTCTAT990.13323643410852712No Hit
CATAGATGTGCCACATACCTTTCCCATCTATGAGACCAAAGCTAGAAACT940.12650732127476313No Hit
CATAGAAGGAGCTGGACTGGATGGACCTGGAAGCCATTATCCTAAGCAAA900.12112403100775193No Hit
CATAGAACAGTCAAATCTCCGAGTAAACAGAAAGCAAACTAACACAGAAA890.11977820844099915No Hit
CATAGAGAACAGCCCTGAGAGAATGATGCTCAGATCTCAAAAGGCTTCTA890.11977820844099915No Hit
CATAGATGGAAATTTTTGGCCAGGCGCAATGGCTCACACCTATAATCCCA820.11035745047372955No Hit
CATAGACCACCGTGCCCAGATAAGTTTTGTAGTTTTGGTGGAGACAGCCG810.10901162790697674No Hit
CATAGATGCCTCAAAGAGCTGAAGACACAGCGGCTGAGAAAGGAGGATCA760.10228251507321275No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)