FastQCFastQC Report
Wed 28 Jun 2023
EGAF00005804489

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005804489
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences74304
Sequences flagged as poor quality0
Sequence length150
%GC38

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
CATAGAGGTGAGCGGCTGTCTCCACAAGTCCGCGCAGAGCCTTCAGGTCA1199516.143141688199826No Hit
CATAGATGAGTGTCCTTGTAGATGTGCAATATGGGCTGGGTGATCTATGT39025.251399655469423No Hit
CATAGAAGGGTTGAGTCTGGAGGCTGACACCTTCCTCCAGACTCTATGTG38375.163921188630491No Hit
CATAGAAAAAGAACTGAGGAAAGGCAACCAAAATGTCAGGGGATCCTCTA35274.746716192937123No Hit
CATAGAGGCAGAGTCCAAAGTGTCCTCTAGCCAAATTCCTTACCGATCTA24903.3510981912144704No Hit
CATAGACATGATGTGCTATGAAGTTAGAGGAGAATGATATTGTTGCAGAT18982.554371231696813No Hit
CATAGATGGGATTATAGGTGTGAGCCACCGCGCCTGGCCAAAAATTTCCA14982.0160422049956934No Hit
CATAGATGGGATTATAGGTGTGAGCCACTGCGCCTGGCCAAAAATTTCCA14892.0039298018949183No Hit
CATAGAGGAGTGACTTTTGTTGCTGCACCTTCCACTACCCACCTGCCTCT14371.9339470284237725No Hit
CATAGAGCTCCAAGATTTTTAGCTGTTCTGTTTACTCGGAGATTTGACTG12521.6849698535745048No Hit
CATAGATGAGTGTCCTTGTAGATGTGCAGGGCAGAGAGTGTGTTGTATTC11811.589416451335056No Hit
CATAGAGCAGCATTTCTCTCCAAGGAGGAGCTGACTTACTGTTCTATGTG11611.5625No Hit
CATAGATGGGATTATAGGTGTGAGCCACCACGCCTGGCCAAAAATTTCCA10571.4225344530577089No Hit
CATAGATCACCAGATGCCAGTTGTGCAATATGGGCTGGGTGATCTATGTG10441.4050387596899225No Hit
CATAGAGGCACGATCTTGTTTCACTGAGCTGAGGGTCACTTCTATGTGTA10021.348514211886305No Hit
CATAGAAGTACCATCAGAGTGAACAGGGCAGAGAGTGTGTTGTATTCTAT7781.0470499569336778No Hit
CATAGAGTGCTCTCTTTCCCCACCCTTCCACTACCCACCTGCCTCTATGT7711.0376291989664082No Hit
CATAGAAGGGTTGAGTCTGGAGGCTGACACCTTCCACTACCCACCTGCCT7701.0362833763996555No Hit
CATAGAGGTGAGCGGCTGTCTTCAGCTCTTTGAGGCATCTATGTGTAGAA7370.991871231696813No Hit
CATAGATCCCATACTCCTCCATTACCCTTCCACTACCCACCTGCCTCTAT5560.7482773471145564No Hit
CATAGAAGCCTTTTGAGATCTGAGCATCTATACGGCAACATATCAGAAGC5490.7388565891472868No Hit
CATAGAGGCAGAGTCCAAAGTGTCCTGGGAAAGGTATGTGGCACATCTAT5470.7361649440137812No Hit
CATAGATGGGAGTTTCTAGCTTTGGTCTGTTTACTCGGAGATTTGACTGT5460.7348191214470284No Hit
CATAGAAACAGCAAAGCCCTCCACCAACAATGCCTCACACACAGGTCTAT4680.6298449612403101No Hit
CATAGATCACTGATTCTGTATTTGCAAATTCTGTTTACTCGGAGATTTGA4440.5975452196382428No Hit
CATAGAGTGAAACCCTGTCTCTACCAAAACTACAAAACTTATCTGGGCAC4400.5921619293712317No Hit
CATAGAGGAGTGACTTTTGTTGCTGCAGATTTCAGAGGAGAATGATATTG4280.5760120585701981No Hit
CATAGAGGTGAGCGGCTGTCTCCAGCTCTTTGAGGCATCTATGTGTAGAA4030.5423664944013781No Hit
CATAGATACCTGTCCTCTGCCTCGAGGAGGAGCTGACTTACTGTTCTATG3360.45219638242894056No Hit
CATAGATGGGAGTTTCTAGCTTTGGTCTAACCAGCCATCCCCAGGTAGCA3270.4400839793281654No Hit
CATAGAGCTCCAAGATTTTTAGCTGTTCTATGTAGAAGTGTATTAATTAT2970.39970930232558144No Hit
CATAGAGCAGCATTTCTCTCCAAGGAATCTTTGGGAGGCTATTAGTCTAT2960.3983634797588286No Hit
CATAGAGTGCTCTCTTTCCCCACCCTACGATAGCGAGAAGAGTGGAGGCT2930.39432601205857015No Hit
CATAGATCCCATACTCCTCCATTACCCTCTCTGTTTACTCGGAGATTTGA2870.38625107665805336No Hit
CATAGACCACACACACAACTGAGAGTCACTAGCACTATTCTCTGGCCCGT2770.3727928509905254No Hit
CATAGAGTGATCCTCCTTTCTCAGCCTACGGCAACATATCAGAAGCATCT2710.3647179155900086No Hit
CATAGATCCCATACTCCTCCATTACCCTACGGCAACATATCAGAAGCATC2710.3647179155900086No Hit
CATAGAGTGAAACCCTGTCTCTACCAAAAATACAAAACTTATCTGGGCAC2690.362026270456503No Hit
CATAGACATGATGTGCTATGAAGTTAGAGGAGGAGCTGACTTACTGTTCT2690.362026270456503No Hit
CATAGATGGGAGTTTCTAGCTTTGGTCTGCAGCATTCTCTCAGGGCTGTT2630.3539513350559862No Hit
CATAGAGTGCTCTCTTTCCCCACCCTCTAGCCAAATTCCTTACCGATCTA2620.3526055124892334No Hit
CATAGAGTGCTCTCTTTCCCCACCCTGTAAGGAATCTTTGGGAGGCTATT2480.33376399655469424No Hit
CATAGAGGTGGTGGGTACTTGTAGTCCATCCAGTCCAGCTCCTTCTATGT2470.33241817398794143No Hit
CATAGAGTCCTTCCCTCTCACACATGTCGTCAGTGTCCCCAGGTAGCAAA2370.3189599483204134No Hit
CATAGATTCAACCAGCCATCCCCAATCACTGAGCTGAGGGTCACTTCTAT2370.3189599483204134No Hit
CATAGAGTGCTCTCTTTCCCCACCCTAACCTCCCACCCCAGCTGTCTATG2310.3108850129198966No Hit
CATAGATGGGAGTTTCTAGCTTTGGTCTTACGGCAACATATCAGAAGCAT2280.30684754521963825No Hit
CATAGATTCAACCAGCCATCCCCAATATCACTGAGCTGAGGGTCACTTCT2220.2987726098191214No Hit
CATAGAACCAACCTCTCTATCTCCGTGATCTACAGTTTCAATACTATGCC2160.29069767441860467No Hit
CATAGAAACAGCAAAGCCCTCCACCAGCACTTACTAACAAAGCGCTTCCT2130.28666020671834624No Hit
CATAGAAACAGCAAAGCCCTCCACCAGTCCATCCAGTCCAGCTCCTTCTA2060.27723944875107664No Hit
CATAGATGAGTGTCCTTGTAGATGTGCAACAATGCCTCACACACAGGTCT2030.2732019810508183No Hit
CATAGAGTGAAACCCTGTCTCTACCAAAAGTACCAAAACTTATCTGGGCA2030.2732019810508183No Hit
CATAGAGCTCCAAGATTTTTAGCTGTTCTCTCTTGCTCCTTCTCACACAA2000.2691645133505599No Hit
CATAGAGTGCTCTCTTTCCCCACCCTACGGCAACATATCAGAAGCATCTA1900.25570628768303183No Hit
CATAGAGTCCTTCCCTCTCACACATGTCTTCAGCTCTTTGAGGCATCTAT1900.25570628768303183No Hit
CATAGAGGCACAGGGATAATGAGGGAGACAACCAAAATGTCAGGGGATCC1860.25032299741602065No Hit
CATAGAGCTCCAAGATTTTTAGCTGTTCTCTATGTGCATTCTCTCAGGGC1850.24897717484926787No Hit
CATAGAGTGAAACCCTGTCTCTACCAAAAATACAAAAAACTTATCTGGGC1830.24628552971576226No Hit
CATAGAGGTGGTGGGTACTTGTAGTCCGTGTAACTTATCTGGGCACGGTG1800.24224806201550386No Hit
CATAGAGGTTTTCTGTTTCTGTGTTAGTTTGCTAAGTGTAATAGCCTCTA1790.24090223944875105No Hit
CATAGATATTCTGCCCCCTCCTCTCCTACGGCAACATATCAGAAGCATCT1790.24090223944875105No Hit
CATAGACCATCCCTTCTACAAGAGGCACAGGGCAGAGAGTGTGTTGTATT1780.2395564168819983No Hit
CATAGAGCTCCAAGATTTTTAGCTGTTCTATGGGGTCACTGACAGGTCTT1770.2382105943152455No Hit
CATAGAAACAGCAAAGCCCTCCACCACCCACCTGCCTCTATGTGTAGAAC1750.23551894918173985No Hit
CATAGAGTGCTCTCTTTCCCCACCCTCACTGAGCTGAGGGTCACTTCTAT1750.23551894918173985No Hit
CATAGAAACAGCAAAGCCTTCCACTACCCACCTGCCTCTATGTGTAGAAC1710.2301356589147287No Hit
CATAGAGTGCTCTCTTTCCCCACCCCAGGTAGCAAAACAGAGTCTATGTG1660.2234065460809647No Hit
CATAGAGGCAGAGTCCAAAGTGTCCTTCCACTACCCACCTGCCTCTATGT1630.2193690783807063No Hit
CATAGAGGCAGAGTCCAAAGTGTCCTCTACACATAGACTCTGTTTACTCG1620.2180232558139535No Hit
CATAGATATTCTGCCCCCTCCTCTCCACTGGGAAAGGTATGTGGCACATC1610.21667743324720068No Hit
CATAGAGGCAGAGTCCAAAGTGTCCTTGTAGATGTGCAATATGGGCTGGG1600.2153316106804479No Hit
CATAGATGGGATTATAGGTGTGAGCCATCGCGCCTGGCCAAAAATTTCCA1520.2045650301464255No Hit
CATAGATCTCCCTAATTAACTAAGCTAATGTTCTACACTGAAGCAGAGGT1510.20321920757967268No Hit
CATAGACCATCCCTTCTACAAGAGGCAGGGCAGAGAGTGTGTTGTATTCT1470.19783591731266148No Hit
CATAGAGTGCTCTCTTTCCCCACCCTATAGATCCCCTCTAGCCAAATTCC1460.19649009474590873No Hit
CATAGAGTGATCCTCCTTTCTCAGCTTACACTGCACATGGGGTCTATGTG1400.1884151593453919No Hit
CATAGAAAAAGAACTGAGGAAAGGCAACATAACGGCAACATATCAGAAGC1370.1843776916451335No Hit
CATAGAGTGATCCTCCTTTCTCAGCCCCAGGTAGCAAAACAGAGTCTATG1360.1830318690783807No Hit
CATAGACCATCCCTTCTACAAGAGGCACGATCTTGCTCCTTCTCACACAA1320.1776485788113695No Hit
CATAGAGGTGAGCGGCTGTCTCCATTCTCTCAGGGCTGTTCTCTATGTGT1320.1776485788113695No Hit
CATAGAGGTTTTCTGTTTCTGTGTTAGTTTGCTTCTGTTTACTCGGAGAT1260.1695736434108527No Hit
CATAGACGAAATGTACAGGTTGCTAAGTTAAAGAAGTGTATTAATTATCT1260.1695736434108527No Hit
CATAGAGCTCCAAGATTTTTAGCTGTTCTATGTGTAGAACCATGTCGTCA1250.16822782084409993No Hit
CATAGATGGGAGTTTCTAGCTTTGGTCTTGCTCCTTCTCACACAAATCTA1230.1655361757105943No Hit
CATAGATACCTGTCCTCTGCCTCGAGGAGAATGATATTGTTGCAGATTTC1210.16284453057708873No Hit
CATAGACGAAATGTACAGGTTGCTAAGTTAATTGGGTAGAGAGTTCTGTA1210.16284453057708873No Hit
CATAGAGGAGAATGATATTGTTGCAGATTTCTATGTGTAGAACCATGTCG1190.1601528854435831No Hit
CATAGAGCTCCAAGATTTTTAGCTGTTCTCTATGCATTCTCTCAGGGCTG1180.15880706287683033No Hit
CATAGATATTCTGCCCCCTCCTCTCCTCTAGCCAAATTCCTTACCGATCT1150.1547695951765719No Hit
CATAGAGCCCCCAGAGAAGAATGACGAGGAGAATGATATTGTTGCAGATT1150.1547695951765719No Hit
CATAGATATTCTGCCCCCTCCTCTCCTAACCTCCCACCCCAGCTGTCTAT1130.15207795004306632No Hit
CATAGAGTGCTCTCTTTCCCCACCCTGGGTAGAGAGTTCTGTAGATGTTC1110.1493863049095607No Hit
CATAGATGGGAGTTTCTAGCTTTGGTCTCATAGATGGGAGTTTCTAGCAC1110.1493863049095607No Hit
CATAGAGTGAAACCCTGTCTCTACCAAAAATACAAAAACTTATCTGGGCA1100.14804048234280792No Hit
CATAGATCCCATACTCCTCCATTACCCTCTAGCCAAATTCCTTACCGATC1080.14534883720930233No Hit
CATAGAGGTGAGCGGCTGTCTCCATCCAGTCCAGCTCCTTCTATGTGTAG1040.13996554694229113No Hit
CATAGAAAAAGAACTGAGGAAAGGCAACTTATCTGGGCACGGTGGTCTAT1000.13458225667527995No Hit
CATAGAAAAAGAACTGAGGAAAGGCAACAATGCCTCACACACAGGTCTAT990.13323643410852712No Hit
CATAGAAGCCTTTTGAGATCTGAGCATCATTCTCTCAGGGCTGTTCTCTA910.12246985357450475No Hit
CATAGATGGGAGTTTCTAGCTTTGGTCTCATAGATGGGAAAGGTATGTGG910.12246985357450475No Hit
CATAGAGGTTTTCTGTTTCTGTGTTAGTTTGCTTAGGATAATGGCTTCCA900.12112403100775193No Hit
CATAGAGGTTTTCTGTTTCTGTGTTAGTTTGCTTTCTGTTTACTCGGAGA860.11574074074074073No Hit
CATAGATGGGATTATAGGTGTGAGCCATTGCGCCTGGCCAAAAATTTCCA850.11439491817398795No Hit
CATAGAGCTCCAAGATTTTTAGCTGTTCTCTATGTGTAGAACCATGTCGT800.10766580534022395No Hit
CATAGAGGTGAGCGGCTGTCTCCACCAAAACTACAAAACTTATCTGGGCA790.10631998277347114No Hit
CATAGAGTGATCCTCCTTTCTCAGCCGCTGTGTCTTCAGCTCTTTGAGGC760.10228251507321275No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)