FastQCFastQC Report
Wed 28 Jun 2023
EGAF00005804490

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005804490
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences160999
Sequences flagged as poor quality0
Sequence length150
%GC41

[OK]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
CATAGATCATGGGACTTCAGCATGGCGGTGTTTGCAGATTTGGACCTGCG4216526.189603662134548No Hit
CATAGAGAATTTGCACACCACGGGACATGGATGAAGCTGGATCTATGAGA109996.831719451673612No Hit
CATAGATGTCTCCCAGGCTAGAGTGAGCCCTTGTCCCTTTCTATGAGACC76674.762141379760123No Hit
CATAGAACCCAAAGAGTGAGCAGCAGAATCAGGGTTGGTTCTATGAGACC59493.695054006546625No Hit
CATAGACCTTCCTGTTGGCCACACAGAATTAGCGGAGAGTGAGAACTCTA47962.978900490065156No Hit
CATAGATCATGGGACTTCAGCATGGTGGGTGCCTGATTGTTCTATGAGAC47662.9602668339554903No Hit
CATAGAGGGTGTTTTTCGGTGTTACAACCAATGCTCTTTCATCTATGAGA46192.8689619190181306No Hit
CATAGACACTGATAGGTTCCAACTTTCCTGGGAGAGGCTGTTTGAGATCT43142.679519748569867No Hit
CATAGAGCTTCTTTCTGTTCATATTGGGCAACAGAACAACAACATCTATG40402.509332356101591No Hit
CATAGAGCTTCTTTCTGTTCATATTGGGGAACAGAACAACAACATCTATG40112.4913198218622474No Hit
CATAGAGGGTGTTTTTCGGTGTCACAACCAATGCTCTTTCATCTATGAGA39302.4410089503661516No Hit
CATAGAGAATTTGCACACCACGGGACCATGCTCACACCTTGATCTATGAG29611.8391418580239631No Hit
CATAGATCTTTGGTAGATATGGGGTCTCCCAGGCCTGAGATTGCTGCTAT29471.8304461518394524No Hit
CATAGACCACACCCAAACACCACGTACACTGACGACATGGTTCTACACAT22801.4161578643345611No Hit
CATAGACAGGAGGAGGAAGAAGAGGAATTCTTGCCAGGGATCTATGAGAC21581.3403809961552555No Hit
CATAGACAGCTCACAGACTGCATACTACACTGACGACATGGTGGGTGCCT14410.8950366151342555No Hit
CATAGAACAGACACAAATCTCAAAGCTTCTACACTGACGACATGGTTCTA12530.7782657035136864No Hit
CATAGAACAAGGCCAGAATTACCCTGGGAGAGGCTGTTTGAGATCTATGA11090.688824154187293No Hit
CATAGACTTGATGCCCAGGAAACCTCTATGAGACACTTCAGTTGACTATA10350.642861135783452No Hit
CATAGAACTATGTCAAGAGAATTTTGCACACCACGGGACATGGATGAAGC9450.5869601674544562No Hit
CATAGAACCCAAAGAGTGAGCAGCAGAACAACAACATCTATGAGACCAAG7870.4888229119435525No Hit
CATAGAACCCAAAGAGTGGGCAACAGAACAACAACATCTATGAGACCAAG7790.48385393698097506No Hit
CATAGAACCCAAAGAGTGAGCAGCAGAGTGAGCCCTTGTCCCTTTCTATG7520.4670836464822763No Hit
CATAGAATCAAAATAGTACCCTTGCCTCTACACTGACGACATGGTTCTAC7110.44161764979906704No Hit
CATAGACTTGATGCCCAGGAAACCTCGGCAGTGAGGTACAGAAATCTATG6890.42795296865197924No Hit
CATAGACACTGATAGGTTCCAACTTTCCTGTGCTCATACAGAATTAGATC5690.3534183442133181No Hit
CATAGACCCTTAGAGTTTCAGCCTCCAGCAGAATCAGGGTTGGTTCTATG5610.34844936925074066No Hit
CATAGAACAGACACAAATCTCAAAGCTTCTACACTGACGACATGGTGGGT5510.34223815054751894No Hit
CATAGACAGCTCACAGACTGCATACTACACTGGAGACAGCCGCTCACCTC4650.2888216696998118No Hit
CATAGATGTCTCCCAGGCTAGAGTGCGCCCTTGTCCCTTTCTATGAGACC4600.2857160603482009No Hit
CATAGATCTGTGGCTCCCGATAAATGTGATCTGAGCAAGGATAGCCCTCT4350.27018801359014655No Hit
CATAGAACTATGTCAAGAGAATTTTGCACACCACGGGACCATGCTCACAC4300.26708240423853563No Hit
CATAGATTCTCCCTTGTGCTTTTGGTACACTGACGACATGGTGGGTGCCT4290.2664612823682135No Hit
CATAGACTTGATGCCCAGGAAACCTCCTGCCCCTGCAGGCTGAAAGTGCC4280.2658401604978913No Hit
CATAGAGAAGAGAAGGCGACAATGGCTGCTTTTCTCTTCTTGGCATCTAT4000.24844874812887038No Hit
CATAGAGCTATCAGTATACTCCCACCATGACTCTTCACTATGTCATCTTA3920.24347977316629296No Hit
CATAGAATCAAAATAGTACCCTTGCCTCTACACATAGAGCTGCTTTTCTC3880.24099528568500428No Hit
CATAGAGCAAAAGAGAAACATTAAGCCATAGTGTTACAACCAATGCTCTT3850.23913192007403772No Hit
CATAGATTAGTTCTTATTCTTGGTATGGCACTACACTGACGACATGGTGG3660.22733060453791637No Hit
CATAGATTCTCCCTTGTGCTTTTGGTACACTGACGACATGGTTCTACACA3610.22422499518630548No Hit
CATAGATTCTCCCTTGTGCTTTTGGTACACTCAGACATGTTTCCTAGTTT3480.2161504108721172No Hit
CATAGAACCCAAAGAGTGAGCCCTTGTCCCTTTCTATGAGACCAAGTCTC3460.21490816713147287No Hit
CATAGACAGGAGGAGGAAGAAGAGGAGGGACATGGATGAAGCTGGATCTA3320.20621246094696238No Hit
CATAGAGAATTTGTACACCACGGGACATGGATGAAGCTGGATCTATGAGA3080.19130553605923017No Hit
CATAGAACCCAAAGAGTGAGCAGCAGAACCCAAAGAGTGAGCCCTTGTCC3040.18882104857794146No Hit
CATAGAGCTATCAGTATACTCCCACCATGGTGGGTGCCTGATTGTTCTAT2940.18260982987471974No Hit
CATAGAACCCAAAGAGTGAGCAGCAGAGAGTGAGCCCTTGTCCCTTTCTA2810.17453524556053143No Hit
CATAGAACAAGGCCAGAATTACCCTGGGTGAGAAATGATGATGGCTCTAT2700.1677029049869875No Hit
CATAGACAGCTCACAGACTGCATACTACACTGACGACATGGTTCTACACA2690.16708178311666533No Hit
CATAGAACCCAAAGAGTGAGCAGCAGCACTGACGACATGGTTCTACACAT2610.1621128081540879No Hit
CATAGACACTGATAGGTTCCAACTTTCCTGGGTGAGAAATGATGATGGCT2530.1571438331915105No Hit
CATAGACACTGATAGGTTCCAACTTTCCTGGGCAACAGAACAACAACATC2500.15528046758054398No Hit
CATAGATCTTTGGTAGATATGGGGTCTCCTGGGAGAGGCTGTTTGAGATC2330.144721395785067No Hit
CATAGACAGGAGGAGGAAGAAGAGGATTGCTTGAACCCAGGAGACTGAGG2320.1441002739147448No Hit
CATAGAACAAGGCCAGAATTACCCTGTGCTCATACAGAATTAGATCTAGC2320.1441002739147448No Hit
CATAGATCTTTGGTAGATATGGGGTCTCCCAGGCTAGAGTGAGCCCTTGT2310.14347915204442263No Hit
CATAGATCATGGGACTTCAGCATGGCGGTGTCTGCAGATTTGGACCTGCG2310.14347915204442263No Hit
CATAGATGTCTCCTAGGCTAGAGTGAGCCCTTGTCCCTTTCTATGAGACC2270.14099466456313392No Hit
CATAGATCATGGGACTTCAGCATGGCGGTGTTCGCAGATTTGGACCTGCG2240.13913129895216741No Hit
CATAGAGCTTCTTTCTGTTCATATTGAGGAATTCTTGCCAGGGATCTATG2160.13416232398959No Hit
CATAGACAGGAGGAGGAAGAAGAGGAAGACAAGGAGGAGGAGGAGGAGGA2160.13416232398959No Hit
CATAGATCTTTGGTAGATATGGGGTCTCCCAGGCAGTCTCAAACGTTGTG2140.13292008024894564No Hit
CATAGAGAAGAGAAGGCGACAATGGCTGGCTGAATGGGAGGCCTGAGATT2110.13105671463797913No Hit
CATAGAGAAGAGAAGGCGACAATGGGACATGGATGAAGCTGGATCTATGA2090.12981447089733478No Hit
CATAGACACTGATAGGTTCCAACTTTCCTGACACTGACGACATGGTGGGT1980.12298213032379084No Hit
CATAGATGTCTCCCAGGCTAGAGTGCTCATACAGAATTAGATCTAGCTCT1900.11801315536121343No Hit
CATAGAGGGCCAGAAGTTTGTTTACCTACACTGACGACATGGTTCTACAC1890.11739203349089124No Hit
CATAGATCATGGGACTTCAGCATGGCGGTGTTTGCAGATTTGGACCCGCG1840.11428642413928036No Hit
CATAGACACTGATAGGTTCCAACTTTCCTGACACTCAGACATGTTTCCTA1820.11304418039863602No Hit
CATAGAATCAAAATAGTACCCTTGCCTCTACGTCCGCAGTTGTTCTTTCC1800.11180193665799167No Hit
CATAGAACCCAAAGAGTGAGCAGCAGCCCAAAGAGTGAGCCCTTGTCCCT1780.11055969291734731No Hit
CATAGATCATGGGACTTCAGCATGGCGGTGTTTGCGGATTTGGACCTGCG1780.11055969291734731No Hit
CATAGATCATGGGACTTCAGCATGGTGGTGTTTGCAGATTTGGACCTGCG1750.10869632730638079No Hit
CATAGACAGGAGGAGGAAGAAGAGGATCACTTAAGCCCAGGAGTTCAAGG1730.10745408356573644No Hit
CATAGAACAGACACAAATCTCAAAGCTTCTTTCTGTTCATATTGAGGAAT1700.1055907179547699No Hit
CATAGAGCTTCTTTCTGTTCATATTGGGGAATTCTTGCCAGGGATCTATG1680.10434847421412555No Hit
CATAGAATCAAAATAGTACCCTTGCCTCTACACTGACGACATGGTGGGTG1670.10372735234380338No Hit
CATAGAGAATTTGCACACCACGGGACTTCAGTTGACTATAAGAAACACCT1620.1006217429921925No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)