FastQCFastQC Report
Wed 28 Jun 2023
EGAF00005804494

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005804494
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences57702
Sequences flagged as poor quality0
Sequence length150
%GC46

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
CATAGATCATGGGACTTCAGCATGGCGGTGTTTGCAGATTTGGACCTGCG2446142.39194481993692No Hit
CATAGAGAATTTGCACACCACGGGACATGGATGAAGCTGGATCTATGAGA22133.835222349311982No Hit
CATAGATGTCTCCCAGGCTAGAGTGAGCCCTTGTCCCTTTCTATGAGACC12452.1576375168971613No Hit
CATAGATTAGTTCTTATTCTTGGTATGGCACTTCAGTTGACTATAAGAAA8061.3968319988908529No Hit
CATAGACTTGATGCCCAGGAAACCTCCTGCCCCTGCAGGCTGAAAGTGCC6871.1905999792034938No Hit
CATAGACACTGATAGGTTCCAACTTTCCTGGGTGAGAAATGATGATGGCT6511.128210460642612No Hit
CATAGATCATGGGACTTCAGCATGGTGGGTGCCTGATTGTTCTATGAGAC6391.1074139544556514No Hit
CATAGAACCCAAAGAGTGAGCAGCAGAATCAGGGTTGGTTCTATGAGACC6341.0987487435444179No Hit
CATAGACCACACCCAAACACCACGTACACTGACGACATGGTTCTACACAT5570.9653044955114207No Hit
CATAGAGAATTTGCACACCACGGGACCATGCTCACACCTTGATCTATGAG5450.9445079893244602No Hit
CATAGAACAAGGCCAGAATTACCCTGGGTGAGAAATGATGATGGCTCTAT5170.8959828082215521No Hit
CATAGAGCTTCTTTCTGTTCATATTGGGCAACAGAACAACAACATCTATG4220.7313438009081141No Hit
CATAGAACAATGTAATAAGCATCGGAGGACCATGCTCACACCTTGATCTA4080.70708121035666No Hit
CATAGACTTGATGCCCAGGAAACCTCTATGAGACCACTTCAGTTGACTAT3730.646424733978025No Hit
CATAGAGGGTGTTTTTCGGTGTTACAACCAATGCTCTTTCATCTATGAGA3590.6221621434265711No Hit
CATAGACCTTCCTGTTGGCCACACAGAATTAGCGGAGAGTGAGAACTCTA3510.6082978059685973No Hit
CATAGAGCTTCTTTCTGTTCATATTGGGGAACAGAACAACAACATCTATG3120.5407091608609754No Hit
CATAGACACTGATAGGTTCCAACTTTCCTGGGAGAGGCTGTTTGAGATCT2850.493917021940314No Hit
CATAGAACAAGGCCAGAATTACCCTGGGAGAGGCTGTTTGAGATCTATGA2830.49045093757582064No Hit
CATAGAACCCAAAGAGTGAGCAGCAGCACTGACGACATGGTTCTACACAT2710.46965443138886004No Hit
CATAGATTCTCCCTTGTGCTTTTGGTACACATAGATTCTCCCTTGTGCTC2570.44539184083740596No Hit
CATAGATTCTCCCTTGTGCTTTTGGTACACTGACGACATGGTGGGTGCCT2520.4367266299261724No Hit
CATAGATCATGGGACTTCAGCATGGCGGTGTTTGCAGATTTGGACCTACG2310.4003327440989914No Hit
CATAGAACTATGTCAAGAGAATTTTGCACACCACGGGACATGGATGAAGC2120.3674049426363038No Hit
CATAGAGGGTGTTTTTCGGTGTCACAACCAATGCTCTTTCATCTATGAGA2120.3674049426363038No Hit
CATAGATCTTTGGTAGATATGGGGTCTCCCAGGCCTGAGATTGCTGCTAT2100.36393885827181033No Hit
CATAGACTTGATGCCCAGGAAACCTCTATACTTCAGTTGACTATAAGAAA2080.36047277390731686No Hit
CATAGACACTGATAGGTTCCAACTTTCCTGGGCAACAGAACAACAACATC1980.3431423520848497No Hit
CATAGAACCCAAAGAGTGAGCAGCAGAGTGAGCCCTTGTCCCTTTCTATG1910.33101105680912274No Hit
CATAGAACAGACACAAATCTCAAAGCTTCTGGGAGAGGCTGTTTGAGATC1830.317146719351149No Hit
CATAGAACAGACACAAATCTCAAAGCTTCTGCTACCGTACTGGGTGAGAA1750.30328238189317525No Hit
CATAGAATGCAGGAGAATATACACAGGTTACACTGACGACATGGTGGGTG1710.2963502131641884No Hit
CATAGATCATGGGACTTCAGCATGGCGGTGTTTGCGGATTTGGACCTGCG1670.2894180444352015No Hit
CATAGATCTGTGGCTCCCGATAAATGTGCTCATACAGAATTAGATCTAGC1580.2738206647949811No Hit
CATAGACAGGAGGAGGAAGAAGAGGAATTCTTGCCAGGGATCTATGAGAC1540.26688849606599424No Hit
CATAGAACAAGGCCAGAATTACCCTGTGCTCATACAGAATTAGATCTAGC1520.2634224117015008No Hit
CATAGAGCAAAAGAGAAACATTAAGCCATAGTATAGATGTCCCCCAGTAT1420.24609198987903366No Hit
CATAGATCATGGGACTTCAGCATGGCGGTGTTCGCAGATTTGGACCTGCG1330.23049461023881324No Hit
CATAGACAGGAGGAGGAAGAAGAGGATCACTTGGGTCCAAGAGTTTGAAG1320.22876156805656647No Hit
CATAGAACTATGTCAAGAGAATTTTGCACAACACTGATCTGAGCAAGGAT1290.22356244150982635No Hit
CATAGATCATGGGACTTCAGCATGGCGGTGTTTGCAGATTTGGACCCGCG1220.21143114623409934No Hit
CATAGACAGCTCACAGACTGCATACTACACTGACGACATGGTGGGTGCCT1190.20623201968735919No Hit
CATAGAACAAGGCCAGAATTACCCTGCACTGACGACTCTTCACTATGTCA1170.20276593532286574No Hit
CATAGAACAGACACAAATCTCAAAGCTTCTGCAGAGAATTAGCGGAGAGT1170.20276593532286574No Hit
CATAGATCATGGGACTTCAGCATGGCGGTGTCTGCAGATTTGGACCTGCG1160.20103289314061906No Hit
CATAGAACAAGGCCAGAATTACCCTGGGCAACAGAACAACAACATCTATG1160.20103289314061906No Hit
CATAGATCATGGGACTTCAGCATGGCGGTGTTTGCAGATTCGGACCTGCG1120.19410072441163218No Hit
CATAGAATGCAGGAGAATATACACAGGTTACACTGGAGACAGCCGCTCAC1060.1837024713181519No Hit
CATAGATCATGGGACTTCAGCATGGCGGCGTTTGCAGATTTGGACCTGCG1050.18196942913590516No Hit
CATAGATTCTCCCTTGTGCTTTTGGTACACTGACGACATGGGCAACAGAA1040.18023638695365843No Hit
CATAGAGAAGAGAAGGCGACAATGGCTCACACCTGTAATCCCAGCACTTT1010.1750372604069183No Hit
CATAGAACAGACACAAATCTCAAAGCTTCTACACTGGAGACAGCCGCTCA1000.1733042182246716No Hit
CATAGAACCCAAAGAGTGAGCAGCAGACGACATGGTTCTACACATAGAAC980.16983813386017815No Hit
CATAGATCATGGGACTTCAGCATGGTGGTGTTTGCAGATTTGGACCTGCG970.16810509167793145No Hit
CATAGATCATGGGACTTCAGCATGGCGGTGTTTGCAGATTTGGGCCTGCG970.16810509167793145No Hit
CATAGACCACACCCAAACACCACGTACACTGACGACTCTTCACTATGTCA970.16810509167793145No Hit
CATAGAATCAAAATAGTACCCTTGCCTCTGCTACCGTAGAATTAGCGGAG950.164639007313438No Hit
CATAGATCATGGGACTTCAGCATGGCGGTGCTTGCAGATTTGGACCTGCG950.164639007313438No Hit
CATAGATCATGGGACTTCAGCATGGCGGTGTTTGCAGGTTTGGACCTGCG940.1629059651311913No Hit
CATAGATCATGGGACTTCAGCATGGCGGTATTTGCAGATTTGGACCTGCG920.15943988076669785No Hit
CATAGACAGCTGACCAGAAAATGTTTCAGTGTCCTGGGAGAGGCTGTTTG910.15770683858445114No Hit
CATAGAACTATGTCAAGAGAATTTTGCACACCACGGGACCATGCTCACAC900.15597379640220443No Hit
CATAGATCTGTGGCTCCCGATAAATGTACACTGACGACATGGTGGGTGCC900.15597379640220443No Hit
CATAGAGAAGAGAAGGCGACAATGGCTGCTTTTCTCTTCTTGGCATCTAT900.15597379640220443No Hit
CATAGAGCAAAAGAGAAACATTAAGCCATAGTACACTGACGACATGGGCA890.1542407542199577No Hit
CATAGAGGGTGTTTTTCGGTGTCACACACTGACGACATGGTTCTACACAT880.152507712037711No Hit
CATAGAACCCAAAGAGTGAGCAGCAGCTGACGACATGGTTCTACACATAG860.14904162767321757No Hit
CATAGAGAAGAGAAGGCGACAATGGCTCACACCGGTAATTCCAGCTACTT850.14730858549097084No Hit
CATAGAGGGCCAGAAGTTTGTTTACCTACACTGATCTGAGCAAGGATAGC810.14037641676198398No Hit
CATAGACAGCTGACCAGAAAATGTTTCAGTGGAGAGGTCTTGGCAGGCTT790.13691033239749054No Hit
CATAGATCATGGGACTTCAGCATGGCGGTGTTTGCAGACTTGGACCTGCG780.13517729021524386No Hit
CATAGATTCTCCCTTGTGCTTTTGGTTCCCTTGCTGCTTTTCTCTTCTTG780.13517729021524386No Hit
CATAGACTTGATGCCCAGGAAACCTCTAAAAAGATGCTCTTCCTCATTCG770.13344424803299712No Hit
CATAGAGAAGAGAAGGCGACAATGGCCGCTAAGCCGAGAAGATCTCTATG770.13344424803299712No Hit
CATAGACAGGAGGAGGAAGAAGAGGAGACAGAGGTGGCACGAGAGGGGAT770.13344424803299712No Hit
CATAGACAGCTGACCAGAAAATGTTTCAGTGTAGCTTGGGTGACAGAGTG760.1317112058507504No Hit
CATAGAGGGCCAGAAGTTTGTTTACCTACACGGACCATGCTCACACCTTG760.1317112058507504No Hit
CATAGATGTCTCCCAGGCTAGAGTGCGCCCTTGTCCCTTTCTATGAGACC750.1299781636685037No Hit
CATAGATCATGGGACTTCAGCATGGCTCCAGTTAAAAGTGCCAGACCCCA730.12651207930401026No Hit
CATAGAATCAAAATAGTACCCTTGCCTCTGCTACCGTACCCCCAGTATTT710.12304599493951683No Hit
CATAGATCATGGGACTTCAGCATGGCGGTGTTTGCAGATTTGGACCTGCA700.12131295275727011No Hit
CATAGACTTGATGCCCAGGAAACCTCACACTGAGGAATTCTTGCCAGGGA690.11957991057502339No Hit
CATAGACACTGATAGGTTCCAACTTTCCTGCACTGGAGACAGCCGCTCAC690.11957991057502339No Hit
CATAGAACAATGTAATAAGCATCGGAGGACACTGACGACATGGTTCTACA680.11784686839277668No Hit
CATAGAACCCAAAGAGTGAGCAGCAGAGGATGGATGCTGGCGGTGAGAGG680.11784686839277668No Hit
CATAGATTCTCCCTTGTGCTTTTGGTTTCTCTTTTGCCGAGGCCTGAGAT660.11438078402828324No Hit
CATAGATCATGGGACTTCAGCATGGCGGTGTTTGCAGATCTGGACCTGCG650.11264774184603654No Hit
CATAGAACCCAAAGAGTGAGCAGCAGAACCCAAAGAGTGAGCCCTTGTCC650.11264774184603654No Hit
CATAGACAGCTCACAGACTGCATACTACACTGACGACATGGAGACAGCCG650.11264774184603654No Hit
CATAGAACCCAAAGAGTGAGCAGCAGACATGGTTCTACACATAGAACCCA640.11091469966378982No Hit
CATAGAACCCAAAGAGTGAGCAGCAGCCCAAAGAGTGAGCCCTTGTCCCT630.1091816574815431No Hit
CATAGATTAGTTCTTATTCTTGGTATGGCACACACTGACGACATGGTGGG600.10398253093480295No Hit
CATAGACCTTCCTGTTGGCCACACAGGGACTTCCTATTGACCACCCAGGG600.10398253093480295No Hit
CATAGACCCTTAGAGTTTCAGCCTCCAGCAGAATCAGGGTTGGTTCTATG590.10224948875255625No Hit
CATAGAACCCAAAGAGTGAGCAGCAGAGAGTGAGCCCTTGTCCCTTTCTA590.10224948875255625No Hit
CGTAGATCATGGGACTTCAGCATGGCGGTGTTTGCAGATTTGGACCTGCG580.10051644657030953No Hit
CATAGACCCTTAGAGTTTCAGCCTCCCCCAGTATTTCATTATTAAAAGTT580.10051644657030953No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)