FastQCFastQC Report
Wed 28 Jun 2023
EGAF00005804495

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005804495
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences57702
Sequences flagged as poor quality0
Sequence length150
%GC48

[WARN]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
CATAGAGGTGAGCGGCTGTCTCCACAAGTCCGCGCAGAGCCTTCAGGTCA2358640.875532910471044No Hit
CATAGATCCAGCTTCATCCATGTCCCGTGGTGTGCAAATTCTCTATGTGT21203.674049426363038No Hit
CATAGAAAGGGACAAGGGCTCACTCTAGCCTGGGAGACATCTATGTGTAG16492.8577865585248343No Hit
CATAGAAAGGGACAAGGGCTCACTCTTTGGGTTCTATGTGTAGAACCATG10111.7521056462514297No Hit
CATAGAGGTGTTTCTTATAGTCAACTGAAGTGCCATACCAAGAATAAGAA7771.3465737756056984No Hit
CATAGAACCAACCCTGATTCTGCTGCTCACTCTTTGGGTTCTATGTGTAG7091.2287269072129217No Hit
CATAGAGGCGAGCGGCTGTCTCCACAAGTCCGCGCAGAGCCTTCAGGTCA6791.17673564174552No Hit
CATAGAACAATCAGGCACCCACCATGCTGAAGTCCCATGATCTATGTGTA6761.17153651519878No Hit
CATAGAGCCATCATCATTTCTCACCCAGGAAAGTTGGAACCTATCAGTGT6091.0554226889882499No Hit
CATAGACTCACTCTGTCACCCAAGCTGGAGTGCAGTGGCGTGCTCTTGGC5991.0380922671657826No Hit
CATAGATCAAGGTGTGAGCATGGTCCCGTGGTGTGCAAATTCTCTATGTG5210.902914976950539No Hit
CATAGAGCCATCATCATTTCTCACCCAGGGTAATTCTGGCCTTGTTCTAT5010.8682541333056046No Hit
CATAGATGTTGTTGTTCTGTTGCCCAATATGAACAGAAAGAAGCTCTATG4170.7226785899968805No Hit
CATAGATCAAGGTGTGAGCATGGTCCTCCGATGCTTATTACATTGTTCTA4110.7122803369034003No Hit
CATAGATGAAAGAGCATTGGTTGTAACACCGAAAAACACCCTCTATGTGT3650.6325603965200514No Hit
CATAGAGTTCTCACTCTCCGCTAATTCTGTGTGGCCAACAGGAAGGTCTA3420.5927004263283768No Hit
CATAGAGGTGTTTCTTATAGTCAACTGAAGTGGTCTCATAGAGGTTTCCT3370.5840352154171433No Hit
CATAGATGTTGTTGTTCTGTTCCCCAATATGAACAGAAAGAAGCTCTATG2950.5112474437627812No Hit
CATAGATCTCAAACAGCCTCTCCCAGGAAAGTTGGAACCTATCAGTGTCT2750.47658660011784687No Hit
CATAGAGCTAGATCTAATTCTGTATGAGCACAAGGGAGAATCTATGTGTA2650.45925617829537974No Hit
CATAGATCTCAAACAGCCTCTCCCAGGGTAATTCTGGCCTTGTTCTATGT2620.4540570517486396No Hit
CATAGAACAATCAGGCACCCACCATGTCGTCAGTGTACCAAAAGCACAAG2490.4315275033794323No Hit
CATAGAAAGGGACAAGGGCTCACTCTGCTGCTCACTCTTTGGGTTCTATG2130.3691379848185505No Hit
CATAGATAGCAGCAATCTCAGGCCTGGGAGACCCCATATCTACCAAAGAT2090.36220581608956365No Hit
CATAGATGAAAGAGCATTGGTTGTGACACCGAAAAACACCCTCTATGTGT2070.3587397317250702No Hit
CATAGAGGTGTTTCTTATAGTCAACTGAAGTATAGAGGTTTCCTGGGCAT2020.3500745208138366No Hit
CATAGATCCAGCTTCATCCATGTCCCGTGGTGTGCAAAATTCTCTTGACA1960.3396762677203563No Hit
CATAGATGTTGTTGTTCTGTTGCCCAGGAAAGTTGGAACCTATCAGTGTC1790.3102145506221622No Hit
CATAGAACAATCAGGCACCCACCATGTCGTCAGTGTAACCTGTGTATATT1710.2963502131641884No Hit
CATAGAGCCATCATCATTTCTCACCCAGTACGGTAGCAGAAGCTTTGAGA1680.29115108661744826No Hit
CATAGATCTCAAACAGCCTCTCCCAGAAGCTTTGAGATTTGTGTCTGTTC1630.2824858757062147No Hit
CATAGAGCTAGATCTAATTCTGTATGAGCACATTTATCGGGAGCCACAGA1620.28075283352396796No Hit
CATAGAGGTGAGCGGCTGTCTCCACAAGTCCGCGCGGAGCCTTCAGGTCA1460.2530241586080205No Hit
CATAGAGAAACTTTTAATAATGAAATACTGGGGGACATCTATACTATGGC1430.24782503206128037No Hit
CATAGAGCTAGATCTAATTCTGTATGAGCACAGGGTAATTCTGGCCTTGT1320.22876156805656647No Hit
CATAGAGGTGAGCGGCTGTCTCCACGAGTCCGCGCAGAGCCTTCAGGTCA1260.2183633149630862No Hit
CATAGAGGTGAGCGGCTGTCTCCACAAGTCCGCGCAGAGCCTTCAGGTCG1200.2079650618696059No Hit
CATAGAGGTGAGCGGCTGTCTCCACAGGTCCGCGCAGAGCCTTCAGGTCA1200.2079650618696059No Hit
CATAGAACAATCAGGCACCCACCATGTCGTCAGTGTAGTATGCAGTCTGT1190.20623201968735919No Hit
CATAGAGGGCTATCCTTGCTCAGATCAGTGTTGTGCAAAATTCTCTTGAC1170.20276593532286574No Hit
CATAGAGGTGAGCGGCTGTCTCCACAAGTCCGCGCAGAGCCCTCAGGTCA1150.19929985095837235No Hit
CATAGACTCACTCTGTCACCCAAGCTGGAGTGCAGTGGTGCGGTCAGCTC1100.19063464004713876No Hit
CATAGAGTTCTCACTCTCCGCTAATTCTCTGCAGAAGCTTTGAGATTTGT1090.18890159786489202No Hit
CATAGATCCCTGGCAAGAATTCCTCTTCTTCCTCCTCCTGTCTATGTGTA1080.18716855568264532No Hit
CATAGATGGTAAGATGACATAGTGAAGAGTCGTCAGTGCAGGGTAATTCT1060.1837024713181519No Hit
CATAGAGGTGAGCGGCTGTCTCCACAAGTCCGCGCAGAGCCTTCGGGTCA1040.18023638695365843No Hit
CATAGATGTTGTTGTTCTGTTGCCCAGGGTAATTCTGGCCTTGTTCTATG1030.17850334477141175No Hit
CATAGACAAGCCTGCCAAGACCTCTCAAAGTGCTGGGATTACAGGTGTGA1030.17850334477141175No Hit
CATAGAGGTGAGCGGCTGTCTCCACAAGTCCGCGCAGAGCCTCCAGGTCA1030.17850334477141175No Hit
CATAGAGGTGAGCGGCTGTCTCCAGTGTAACCTGTGTATATTCTCCTGCA1000.1733042182246716No Hit
CATAGATGTTGTTGTTCTGTTGCCCATGTCGTCAGTGTACCAAAAGCACA970.16810509167793145No Hit
CATAGAGGTGAGCGGCTGTCTCCAAGTCCGCGCAGAGCCTTCAGGTCAGA960.16637204949568474No Hit
CATAGAGGTGAGCGGCTGTCTCCAGTGTAGAAGCTTTGAGATTTGTGTCT940.1629059651311913No Hit
CATAGATGGTAAGATGACATAGTGAAGAGTCGTCAGTGTACGTGGTGTTT900.15597379640220443No Hit
CATAGAGGTGAGCGGCTGTCTCCACAAGTCCGCGCAGAGCCTTCAGGCCA900.15597379640220443No Hit
CATAGAACAATCAGGCACCCACCATGTCGTCAGTGTACATTTATCGGGAG900.15597379640220443No Hit
CATAGAGTTCTCACTCTCCGCTAATTCTACGGTAGCAGAGGCAAGGGTAC890.1542407542199577No Hit
CATAGATGTTGTTGTTCTGTTGCCCATGTCGTCAGTGTACTATGGCTTAA850.14730858549097084No Hit
CATAGATCTCAAACAGCCTCTCCCAGGACACTGAAACATTTTCTGGTCAG840.14557554330872413No Hit
CATAGATGCCAAGAAGAGAAAAGCAGCCATTGTCGCCTTCTCTTCTCTAT830.14384250112647742No Hit
CATAGATCAAGGTGTGAGCATGGTCCCGTGGTGTGCAAAATTCTCTTGAC780.13517729021524386No Hit
CATAGAAAGGGACAAGGGCTCACTCTTTGGGTTCTGCTGCTCACTCTTTG780.13517729021524386No Hit
CATAGATGTTGTTGTTCTGTTGCCCACTCTTTGGGTTCTATGTGTAGAAC780.13517729021524386No Hit
CATAGATGCCAAGAAGAGAAAAGCAGCAAGGGAACCAAAAGCACAAGGGA770.13344424803299712No Hit
CATAGATCAAGGTGTGAGCATGGTCCGTGTAGGTAAACAAACTTCTGGCC760.1317112058507504No Hit
CATAGAGATCTTCTCGGCTTAGCGGCCATTGTCGCCTTCTCTTCTCTATG760.1317112058507504No Hit
CATAGACAAGCCTGCCAAGACCTCTCCACTGAAACATTTTCTGGTCAGCT750.1299781636685037No Hit
CATAGAGGGCTATCCTTGCTCAGATCAGTGTAGGTAAACAAACTTCTGGC750.1299781636685037No Hit
CATAGACGGGAAGAGTAAGACCACCCAGAAGCCCAGCCGGCTTCACCTCT730.12651207930401026No Hit
CATAGAAAGGGACAAGGGCGCACTCTAGCCTGGGAGACATCTATGTGTAG730.12651207930401026No Hit
CATAGATCCAGCTTCATCCATGTCCCTGAAAAGAACACGAATGAGGAAGA720.12477903712176354No Hit
CATAGAAAGGGACAAGGGCTCACTCTCTGCTGCTCACTCTTTGGGTTCTA710.12304599493951683No Hit
CATAGATCTCAAACAGCCTCTCCCAGGACCTGCTCTTGGGCTGCCTCTGG700.12131295275727011No Hit
CATAGAGAAACTTTTAATAATGAAATACTGGGGGTACGGTAGCAGAGGCA680.11784686839277668No Hit
CATAGAAAGGGACAAGGGCTCACTCTTTGGGCTGCTGCTCACTCTTTGGG680.11784686839277668No Hit
CATAGATCCAGCTTCATCCATGTCCCACTGGCAAGGAGCTCAGCTCTGCT680.11784686839277668No Hit
CATAGATAGCAGCAATCTCAGGCCTCCAACAACAAATGGGAAGTCCCTGA680.11784686839277668No Hit
CATAGAGGTGAGCGGCTGTCTCCACAAGTTCGCGCAGAGCCTTCAGGTCA680.11784686839277668No Hit
CATAGATCCCTGGCAAGAATTCCTCAGTGTGAGGTTTCCTGGGCATCAAG660.11438078402828324No Hit
CATAGAGATCTTCTCGGCTTAGCGGCTGTCTCCACAAGTCCGCGCAGAGC660.11438078402828324No Hit
CATAGAGGTGAGCGGCTGTCTCCACAAGCCCGCGCAGAGCCTTCAGGTCA660.11438078402828324No Hit
CATAGACTCACTCTGTCACCCAAGCTACACTGAAACATTTTCTGGTCAGC650.11264774184603654No Hit
CATAGAGGTGAGCGGCTGTCTCCAGTGCAGGAAAGTTGGAACCTATCAGT630.1091816574815431No Hit
CATAGAACAATCAGGCACCCACCATGTCGTCAGTGTGTGCCATACCAAGA610.10571557311704967No Hit
CATAGATGTTGTTGTTCTGTTGCCCAGCTTGGTCTTGAACTCCAGGCCTC610.10571557311704967No Hit
CATAGAGGTGAGCGGCTGTCTCCACAAGTCCGCGCAGGGCCTTCAGGTCA610.10571557311704967No Hit
CATAGATAGCAGCAATCTCAGGCCTCGGCAAAAGAGAAACCAAAAGCACA610.10571557311704967No Hit
CATAGATCTCAAACAGCCTCTCCCAGGCCCCGCAGGCACAGACAGCGGCG600.10398253093480295No Hit
CATAGATCCAGCTTCATCCATGTCCCTGCAAAGGACATGATCTCATTCCT600.10398253093480295No Hit
CATAGAGGTGAGCGGCTGCCTCCACAAGTCCGCGCAGAGCCTTCAGGTCA590.10224948875255625No Hit
CATAGATCTAGCTTCATCCATGTCCCGTGGTGTGCAAATTCTCTATGTGT580.10051644657030953No Hit
CATAGAACCAACCCTGATTCTGCTGGAGGCTGAAACTCTAAGGGTCTATG580.10051644657030953No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)