FastQCFastQC Report
Wed 28 Jun 2023
EGAF00005804497

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005804497
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences179238
Sequences flagged as poor quality0
Sequence length150
%GC34

[WARN]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
CATAGACATGATGTGCTATGAAGTTAGAGGAGAATGATATTGTTGCAGAT102245.704147557995514No Hit
CATAGATCTCCCTAATTAACTAAGCTAATGTTCTGTTTACTCGGAGATTT73004.072797063122775No Hit
CATAGATGAGTGTCCTTGTAGATGTGCAATATGGGCTGGGTGATCTATGT67803.782680012051016No Hit
CATAGAAGGGTTGAGTCTGGAGGCTGACACCTTCCTCCAGACTCTATGTG62323.4769412736138547No Hit
CATAGAGGTGAGCGGCTGTCTCCACAAGTCCGCGCAGAGCCTTCAGGTCA58413.258795567904128No Hit
CATAGAAAAAGAACTGAGGAAAGGCAACCAAAATGTCAGGGGATCCTCTA58333.25433222865687No Hit
CATAGAGCTCCAAGATTTTTAGCTGTTCTGTTTACTCGGAGATTTGACTG51932.897265088876243No Hit
CATAGAGGCAGAGTCCAAAGTGTCCTCTAGCCAAATTCCTTACCGATCTA48912.7287740322922596No Hit
CATAGAAGTACCATCAGAGTGAACAGGGCAGAGAGTGTGTTGTATTCTAT42552.3739385621352613No Hit
CATAGAGCAGCATTTCTCTCCAAGGAGGAGCTGACTTACTGTTCTATGTG38552.1507715997723698No Hit
CATAGATCACTGATTCTGTATTTGCAAATTCTGTTTACTCGGAGATTTGA33961.8946875104609513No Hit
CATAGATCTCCCTAATTAACTAAGCTAATGTTCTTGCTCCTTCTCACACA26081.4550485946060545No Hit
CATAGATGGGATTATAGGTGTGAGCCACTGCGCCTGGCCAAAAATTTCCA26051.4533748423883328No Hit
CATAGATGGGATTATAGGTGTGAGCCACCGCGCCTGGCCAAAAATTTCCA23631.3183588301587832No Hit
CATAGAGGAGTGACTTTTGTTGCTGCACCTTCCACTACCCACCTGCCTCT23321.3010633905756592No Hit
CATAGAGGCACGATCTTGTTTCACTGAGCTGAGGGTCACTTCTATGTGTA22271.2424820629554No Hit
CATAGACACAGGCCAATCTCAGCAGACCTTTTTCTGTAGTCAAGTGATCT18841.0511163927292204No Hit
CATAGATCACCAGATGCCAGTTGTGCAATATGGGCTGGGTGATCTATGTG18501.0321472009283745No Hit
CATAGAAACAGCAAAGCCCTCCACCAACAATGCCTCACACACAGGTCTAT16120.899362858322454No Hit
CATAGATGGGATTATAGGTGTGAGCCACCACGCCTGGCCAAAAATTTCCA15900.8870886753924948No Hit
CATAGATGAGTGTCCTTGTAGATGTGCAGGGCAGAGAGTGTGTTGTATTC15230.8497082091967105No Hit
CATAGATCACTGATTCTGTATTTGCAAATTCTTAAGGAATCTTTGGGAGG14450.8061906515359466No Hit
CATAGATGGGAGTTTCTAGCTTTGGTCTATAGGAATCTTTGGGAGGCTAT13990.780526450864214No Hit
CATAGAGGTGAGCGGCTGTCTTCAGCTCTTTGAGGCATCTATGTGTAGAA13600.7587676720338321No Hit
CATAGAGTGCTCTCTTTCCCCACCCTAACCTCCCACCCCAGCTGTCTATG13110.7314297191443778No Hit
CATAGAGCAGCATTTCTCTCCAAGGAAACATTGGAAAGATGGGGATCTAT12900.719713453620326No Hit
CATAGAGGTGGTGGGTACTTGTAGTCCATCCAGTCCAGCTCCTTCTATGT12220.6817750700186345No Hit
CATAGACACACTGACAATTTGCACCTGGGTAGAGAGTTCTGTAGATGTTC11800.6583425389705309No Hit
CATAGATCTCCCTAATTAACTAAGCTAATGTTCTACGGCAACATATCAGA11140.6215199901806536No Hit
CATAGAGGCAGAGTCCAAAGTGTCCTGGGAAAGGTATGTGGCACATCTAT10980.612593311686138No Hit
CATAGATACCTGTCCTCTGCCTCGAGGAGAATGATATTGTTGCAGATTTC10900.6081299724388801No Hit
CATAGATCCCATACTCCTCCATTACCCTTCCACTACCCACCTGCCTCTAT10890.607572055032973No Hit
CATAGAGGTGAGCGGCTGTCTCCAGCTCTTTGAGGCATCTATGTGTAGAA9880.5512223970363428No Hit
CATAGAAGGGTTGAGTCTGGAGGCTGACACCTTCCACTACCCACCTGCCT9760.544527388165456No Hit
CATAGACCATCCCTTCTACAAGAGGCAACAATGCCTCACACACAGGTCTA9500.530021535611868No Hit
CATAGAGCTCCAAGATTTTTAGCTGTTCTATGAGGAGGAGCTGACTTACT9260.5166315178700945No Hit
CATAGAGGCAGAGTCCAAAGTGTCCTTCCACTACCCACCTGCCTCTATGT9120.5088206741873933No Hit
CATAGAAGCCTTTTGAGATCTGAGCATCTAGAGACCTTTTTCTGTAGTCA8970.5004519130987849No Hit
CATAGACCAAGAGTTGACAAGGATCTGGAACAATGCCTCACACACAGGTC8800.490967317198362No Hit
CATAGAGTGCTCTCTTTCCCCACCCTAGCACTATTCTCTGGCCCGTCTAT8460.4719981253975162No Hit
CATAGAGTCCTTCCCTCTCACACATGTTACGGTCACTGACAGGTCTTAAA8400.4686506209620728No Hit
CATAGAAACAGCAAAGCCCTCCACCACCCACCTGCCTCTATGTGTAGAAC8330.46474519912072215No Hit
CATAGATCACCAGATGCCAGTTGTGCTACGATAGCGAGAAGAGTGGAGGC8170.4558185206262065No Hit
CATAGAGGAGTGACTTTTGTTGCTGCAACAATGCCTCACACACAGGTCTA7750.43238598957810287No Hit
CATAGAACCAACCTCTCTATCTCCGTAGTGATCTACAGTTTCAATACTAT7500.41843805443042215No Hit
CATAGAAGCCTTTTGAGATCTGAGCATTCTCTCAGGGCTGTTCTCTATGT7240.40393220187683415No Hit
CATAGAGTCCTTCCCTCTCACACATGTCATGTGTAAACAATGCCTCACAC7090.3955634407882257No Hit
CATAGACCACACACACAACTGAGAGTACGGCAACATATCAGAAGCATCTA7080.3950055233823185No Hit
CATAGACACAGGCCAATCTCAGCAGAACAATGCCTCACACACAGGTCTAT6960.3883105145114317No Hit
CATAGAGTCCTTCCCTCTCACACATGTCGTCAGTGTCCCCAGGTAGCAAA6940.3871946796996173No Hit
CATAGAGTGCTCTCTTTCCCCACCCTTCCACTACCCACCTGCCTCTATGT6730.3754784141755655No Hit
CATAGAAACAGCAAAGCCTTCCACTACCCACCTGCCTCTATGTGTAGAAC6590.36766757049286425No Hit
CATAGAAAAAGAACTGAGGAAAGGCAACAATGCCTCACACACAGGTCTAT6530.36432006605742084No Hit
CATAGACACAGGCCAATCTCAGCAGAAGTGTATTAATTATCTATGGCTGC6250.3486983786920184No Hit
CATAGACCACACACACAACTGAGAGTCTGTGTCTTCAGCTCTTTGAGGCA6190.34535087425657507No Hit
CATAGAGGCACGATCTTGTTTCACTGTCACTGAGCTGAGGGTCACTTCTA6150.34311920463294615No Hit
CATAGAGTGAAACCCTGTCTCTACCAAAACTACAAAACTTATCTGGGCAC5980.33363460873252326No Hit
CATAGATCTCCCTAATTAACTAAGCTAATGTTCTACACGGAAGACACAGC5900.3291712694852654No Hit
CATAGAGGTTTTCTGTTTCTGTGTTAGTTTGCTTTCTGTTTACTCGGAGA5870.3274975172675437No Hit
CATAGACACACTGACAATTTGCACCTGGTCACTGACAGGTCTTAAAGCTC5840.325823765049822No Hit
CATAGAGTGCTCTCTTTCCCCACCCTCTGTTTACTCGGAGATTTGACTGT5460.3046229036253473No Hit
CATAGAGTGAAACCCTGTCTCTACCAAAAATACAAAACTTATCTGGGCAC5430.30294915140762557No Hit
CATAGAGCTCCAAGATTTTTAGCTGTTCTCTATGTGCATTCTCTCAGGGC5320.2968120599426461No Hit
CATAGATCCCATACTCCTCCATTACCCTCACTGAGCTGAGGGTCACTTCT5250.29290663810129547No Hit
CATAGAGGTTTTCTGTTTCTGTGTTAGTTTGCTTCTGTTTACTCGGAGAT5170.28844329885403763No Hit
CATAGAGCAGCATTTCTCTCCAAGGAATCTTTGGGAGGCTATTAGTCTAT5080.2834220422008726No Hit
CATAGACCATCCCTTCTACAAGAGGCAGGTGGGTAGAGAGTTCTGTAGAT5010.27951662035952196No Hit
CATAGAAAAAGAACTGAGGAAAGGCAACTTATCTGGGCACGGTGGTCTAT4910.2739374463004497No Hit
CATAGAGCAGCATTTCTCTCCAAGGAGCATTCTCTCAGGGCTGTTCTCTA4880.272263694082728No Hit
CATAGAAACAGCAAAGCCCTCCACCAGTCCATCCAGTCCAGCTCCTTCTA4870.2717057766768208No Hit
CATAGAGCTCCAAGATTTTTAGCTGTTCTCTATGTGTAGAACCATGTCGT4510.2516207500641605No Hit
CATAGATCTCCCTAATTAACTAAGCTAATGTTCTTCTCATAGACCTTTTT4280.23878864972829422No Hit
CATAGAGCTCCAAGATTTTTAGCTGTTCTCGCATTCTCTCAGGGCTGTTC4210.2348832278869436No Hit
CATAGAGGCACGATCTTGTTTCACTGTCCATCCAGTCCAGCTCCTTCTAT4190.23376739307512917No Hit
CATAGATATTCTGCCCCCTCCTCTCCTAGATAGCGAGAAGAGTGGAGGCT4140.23097780604559298No Hit
CATAGACACACTGACAATTTGCACCTGTACGGAAGACACAGCACACTCTT4060.22651446679833515No Hit
CATAGAGTCCTTCCCTCTCACACATGTCGTCAGTGTAGACCTTTTTCTGT4020.22428279717470628No Hit
CATAGAAACAGCAAAGCCCTCCACCAGTTTAGGAATCTTTGGGAGGCTAT3970.2214932101451701No Hit
CATAGATCACTGATTCTGTATTTGCAAATTCTCACTGAGCTGAGGGTCAC3890.21702987089791226No Hit
CATAGAGTGCTCTCTTTCCCCACCCTACGGCAACATATCAGAAGCATCTA3860.2153561186801906No Hit
CATAGAGTCCTTCCCTCTCACACATGTCTTCAGCTCTTTGAGGCATCTAT3790.21145069683884No Hit
CATAGAGTCCTTCCCTCTCACACATGTCGTCAGTGTAGCTTACACTGCAC3700.2064294401856749No Hit
CATAGATGGGAGTTTCTAGCTTTGGTCTATAGGAAACATTGGAAAGATGG3650.20363985315613878No Hit
CATAGAACCAACCTCTCTATCTCCGTAGGAGGAGCTGACTTACTGTTCTA3620.20196610093841708No Hit
CATAGAACCAACCTCTCTATCTCCGTGCACTGAAGCAGAGGTAGATGGAT3580.19973443131478816No Hit
CATAGAGTGAAACCCTGTCTCTACCAAAAATACAAAAAACTTATCTGGGC3560.19861859650297367No Hit
CATAGAGTGAAACCCTGTCTCTACCAAAAGTACCAAAACTTATCTGGGCA3540.19750276169115924No Hit
CATAGATACCTGTCCTCTGCCTCGAGTACGGTCACTGACAGGTCTTAAAG3480.19415525725571586No Hit
CATAGATCACCAGATGCCAGTTGTGCTATGAAGCAGAGGTAGATGGATCA3470.19359733984980865No Hit
CATAGAAACAGCAAAGCCCTCCACCATACGGAAGACACAGCACACTCTTC3460.1930394224439014No Hit
CATAGAGGAGTGACTTTTGTTGCTGCAGAGGAGAATGATATTGTTGCAGA3350.1869023309789219No Hit
CATAGATGGGATTATAGGTGTGAGCCATCGCGCCTGGCCAAAAATTTCCA3290.18355482654347852No Hit
CATAGACATGATGTGCTATGAAGTTAGAGGAGGAGCTGACTTACTGTTCT3260.18188107432575681No Hit
CATAGAGTGCTCTCTTTCCCCACCCCAGGTAGCAAAACAGAGTCTATGTG3250.18132315691984957No Hit
CATAGATCCCATACTCCTCCATTACCCTACGATAGCGAGAAGAGTGGAGG3250.18132315691984957No Hit
CATAGATCCCATACTCCTCCATTACCCTTACGGTAGCTTACACTGCACAT3150.17574398286077728No Hit
CATAGACCCCCTTGAGTTCACTGGACTGAGGGTCACTGACAGGTCTTAAA3090.1723964784253339No Hit
CATAGACACAGGCCAATCTCAGCAGACTCTTCTATGTCGGAAGACACAGC3080.17183856101942668No Hit
CATAGAACCAACCTCTCTATCTCCGTAGCCATGCTGAAGTCCCATGATCT3060.17072272620761222No Hit
CATAGAGCTCCAAGATTTTTAGCTGTTCTATGTGTAGTCCATCCAGTCCA3020.1684910565839833No Hit
CATAGAGTGATCCTCCTTTCTCAGCCTACGATAGCGAGAAGAGTGGAGGC2960.16514355214853993No Hit
CATAGAGCTCCAAGATTTTTAGCTGTTCTCTGCATTCTCTCAGGGCTGTT2910.1623539651190038No Hit
CATAGATCCCATACTCCTCCATTACCCTTACGGCAACATATCAGAAGCAT2890.16123813030718934No Hit
CATAGAGGCACGATCTTGTTTCACTGTCTTCAGCTCTTTGAGGCATCTAT2860.15956437808946763No Hit
CATAGATACCTGTCCTCTGCCTCGAGGAGGAGCTGACTTACTGTTCTATG2860.15956437808946763No Hit
CATAGATGGGAGTTTCTAGCTTTGGTCTCATAGATGGGTAGAGAGTTCTG2840.15844854327765318No Hit
CATAGAAACAGCAAAGCCCTCCACCATGTCGTCAGTGTAGGAAACATTGG2770.15454312143630258No Hit
CATAGAGTGCTCTCTTTCCCCACCCTGCAGCATTCTCTCAGGGCTGTTCT2740.15286936921858088No Hit
CATAGAGGTGGTGGGTACTTGTAGTCCGTGTCAGGGCAGAGAGTGTGTTG2720.15175353440676642No Hit
CATAGAGCCCCCAGAGAAGAATGACCTACGGCAACATATCAGAAGCATCT2640.14729019515950859No Hit
CATAGATCACTGATTCTGTATTTGCAAATTCTTACCAGGAAACATTGGAA2640.14729019515950859No Hit
CATAGACACAGGCCAATCTCAGCAGATCAGTAAGGAATCTTTGGGAGGCT2550.1422689385063435No Hit
CATAGAGGTGGTGGGTACTTGTAGTCCGTGTCCCCAGGTAGCAAAACAGA2530.14115310369452905No Hit
CATAGAGTGCTCTCTTTCCCCACCCTTACGGCAACATATCAGAAGCATCT2480.1383635166649929No Hit
CATAGACCACACACACAACTGAGAGGAGAATGATATTGTTGCAGATTTCT2400.13390017741773508No Hit
CATAGAGGCACGATCTTGTTTCACTGTGACTTGGTCACTGACAGGTCTTA2400.13390017741773508No Hit
CATAGAGGTTTTCTGTTTCTGTGTTAGTTTGCTAAGTGTAATAGCCTCTA2390.13334226001182786No Hit
CATAGAGGCACGATCTTGTTTCACTGTCGTCAGTGTACTTTTCTAATCAA2370.1322264252000134No Hit
CATAGACCATCCCTTCTACAAGAGGCACATGAGGCACAGGGCAGAGAGTG2360.13166850779410616No Hit
CATAGAGTGATCCTCCTTTCTCAGCCTACGGCAACATATCAGAAGCATCT2330.12999475557638449No Hit
CATAGACCCCCTTGAGTTCACTGGAGGTCACTGACAGGTCTTAAAGCTCT2320.12943683817047724No Hit
CATAGAGGTTTTCTGTTTCTGTGTTAGTTTGCTACGGCAACATATCAGAA2320.12943683817047724No Hit
CATAGAGGCACGATCTTGTTTCACTGTTACGGTAGCTTACACTGCACATG2290.12776308595275557No Hit
CATAGATCCCATACTCCTCCATTACCCTGTGCCGGTCACTGACAGGTCTT2200.1227418292995905No Hit
CATAGAAAAAGAACTGAGGAAAGGCAACGGCAACATATCAGAAGCATCTA2170.1210680770818688No Hit
CATAGAAACAGCAAAGCCCTCCACCAACCAAAATGTCAGGGGATCCTCTA2160.12051015967596157No Hit
CATAGAGGCAGAGTCCAAAGTGTCCTTGTAGATGTGCAATATGGGCTGGG2110.11772057264642542No Hit
CATAGACGAAATGTACAGGTTGCTAAGTTAATTAGGGAGATCAGCTTACA2110.11772057264642542No Hit
CATAGAGGAGAATGATATTGTTGCAGATTTCTATGTGTAGAACCATGTCG2100.1171626552405182No Hit
CATAGAGTGAAACCCTGTCTCTACCAAAAATACAAAAACTTATCTGGGCA2050.11437306821098203No Hit
CATAGAGCTCCAAGATTTTTAGCTGTTCTATGTGTAGAAGTGTATTAATT2050.11437306821098203No Hit
CATAGATATTCTGCCCCCTCCTCTCCTACGATAGCGAGAAGAGTGGAGGC2040.11381515080507482No Hit
CATAGAGTGATCCTCCTTTCTCAGCCATAGGGCACTGAGACCACATCTAT2010.11214139858735314No Hit
CATAGAAGTACCATCAGAGTGAACAGGCACACTGTCTTCAGCTCTTTGAG2010.11214139858735314No Hit
CATAGATCACCAGATGCCAGTTGTGCAACCAAAATGTCAGGGGATCCTCT2000.1115834811814459No Hit
CATAGAGGCAGAGTCCAAAGTGTCCTACCGTATCTGTTTACTCGGAGATT1980.11046764636963144No Hit
CATAGAGGTGGTGGGTACTTGTAGTCCGTGTAGGAAACATTGGAAAGATG1980.11046764636963144No Hit
CATAGACATGATGTGCTATGAAGTTAGAGGTCACTGACAGGTCTTAAAGC1960.10935181155781698No Hit
CATAGAGTCCTTCCCTCTCACACATGTCGTCAGTGTAGGAAACATTGGAA1900.1060043071223736No Hit
CATAGACCATCCCTTCTACAAGAGGCACAGGAATCTTTGGGAGGCTATTA1890.10544638971646637No Hit
CATAGAGCTCCAAGATTTTTAGCTGTTCTATGTAGAAGTGTATTAATTAT1880.10488847231055914No Hit
CATAGAGGTTTTCTGTTTCTGTGTTAGTTTGCTTAGGATAATGGCTTCCA1860.10377263749874469No Hit
CATAGATGGGATTATAGGTGTGAGCCATTGCGCCTGGCCAAAAATTTCCA1840.10265680268693023No Hit
CATAGAAACAGCAAAGCCCTCCACCAACAACAATGCCTCACACACAGGTC1840.10265680268693023No Hit
CATAGAGTGCTCTCTTTCCCCACCCTCTAGCCAAATTCCTTACCGATCTA1810.10098305046920854No Hit
CATAGATATTCTGCCCCCTCCTCTCCTACGGAAGACACAGCACACTCTTC1810.10098305046920854No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)