FastQCFastQC Report
Wed 28 Jun 2023
EGAF00005804506

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005804506
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences529515
Sequences flagged as poor quality0
Sequence length150
%GC42

[WARN]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
CATAGATCATGGGACTTCAGCATGGCGGTGTTTGCAGATTTGGACCTGCG6498412.272362444878803No Hit
CATAGAGAATTTGCACACCACGGGACATGGATGAAGCTGGATCTATGAGA503299.504735465473122No Hit
CATAGATGTCTCCCAGGCTAGAGTGAGCCCTTGTCCCTTTCTATGAGACC333616.300293664957556No Hit
CATAGACACTGATAGGTTCCAACTTTCCTGGGAGAGGCTGTTTGAGATCT212174.006874215083614No Hit
CATAGATCATGGGACTTCAGCATGGTGGGTGCCTGATTGTTCTATGAGAC177253.347402812007214No Hit
CATAGACACTGATAGGTTCCAACTTTCCTGGGTGAGAAATGATGATGGCT150462.841468135935715No Hit
CATAGAACAAGGCCAGAATTACCCTGGGAGAGGCTGTTTGAGATCTATGA144422.7274014900427748No Hit
CATAGAGAATTTGCACACCACGGGACCATGCTCACACCTTGATCTATGAG129542.446389620690632No Hit
CATAGACCTTCCTGTTGGCCACACAGAATTAGCGGAGAGTGAGAACTCTA117942.2273212279161116No Hit
CATAGAGCTTCTTTCTGTTCATATTGGGCAACAGAACAACAACATCTATG116322.1967271937527735No Hit
CATAGAACAAGGCCAGAATTACCCTGGGTGAGAAATGATGATGGCTCTAT112542.125341114038318No Hit
CATAGAACCCAAAGAGTGAGCAGCAGAATCAGGGTTGGTTCTATGAGACC108902.0565989632021755No Hit
CATAGAGGGTGTTTTTCGGTGTTACAACCAATGCTCTTTCATCTATGAGA99621.8813442489825596No Hit
CATAGAGCTTCTTTCTGTTCATATTGGGGAACAGAACAACAACATCTATG86471.6330037864838578No Hit
CATAGAACAGACACAAATCTCAAAGCTTCTGGGAGAGGCTGTTTGAGATC74841.413368837521128No Hit
CATAGAGGGTGTTTTTCGGTGTCACAACCAATGCTCTTTCATCTATGAGA66971.2647422641473802No Hit
CATAGAACCCAAAGAGTGAGCAGCAGAGTGAGCCCTTGTCCCTTTCTATG65231.2318820052312023No Hit
CATAGACACTGATAGGTTCCAACTTTCCTGGGCAACAGAACAACAACATC54861.0360424161732906No Hit
CATAGAACTATGTCAAGAGAATTTTGCACACCACGGGACATGGATGAAGC49040.9261305156605573No Hit
CATAGAACAGACACAAATCTCAAAGCTTCTACACTGACGACATGGTGGGT45250.8545555838833649No Hit
CATAGATCTGTGGCTCCCGATAAATGTGCTCATACAGAATTAGATCTAGC44840.8468126493111621No Hit
CATAGAACAGACACAAATCTCAAAGCTTCTGGGTGAGAAATGATGATGGC34910.6592825510136634No Hit
CATAGACAGCTCACAGACTGCATACTACACTGACGACATGGTGGGTGCCT33910.640397344739998No Hit
CATAGATTAGTTCTTATTCTTGGTATGGCACCACACTGACTCTTCACTAT32520.6141469080196029No Hit
CATAGAACAATGTAATAAGCATCGGAGGAGGCCTGAGATTGCTGCTATCT31400.5929954769930974No Hit
CATAGAACAATGTAATAAGCATCGGAGGACCATGCTCACACCTTGATCTA31210.5894072878011011No Hit
CATAGATCTTTGGTAGATATGGGGTCTCCCAGGCCTGAGATTGCTGCTAT30020.5669338923354391No Hit
CATAGAACAGACACAAATCTCAAAGCTTCTCTACGACTCTTCACTATGTC28960.5469155736853536No Hit
CATAGATGTCTCCCAGGCTAGAGTGCGCCCTTGTCCCTTTCTATGAGACC27280.5151884271455954No Hit
CATAGACTTGATGCCCAGGAAACCTCAGACATGTTTCCTAGTTTCAGTTC26220.49517010849551No Hit
CATAGAACCCAAAGAGTGAGCAGCAGAACCCAAAGAGTGAGCCCTTGTCC23760.4487125010622929No Hit
CATAGAACAGACACAAATCTCAAAGCTTCTACACTGGGCAACAGAACAAC23220.43851448967451345No Hit
CATAGAACTATGTCAAGAGAATTTTGCACACCACGGGACCATGCTCACAC22650.42774992209852414No Hit
CATAGAACAGACACAAATCTCAAAGCTTCTACACTGACGACATGGGCAAC22540.42567254940842086No Hit
CATAGACTTGATGCCCAGGAAACCTCTATGAGACCAAGTCTCTGGCCGCT21530.40659849107201873No Hit
CATAGAACCCAAAGAGTGAGCAGCAGAGAGTGAGCCCTTGTCCCTTTCTA20970.396022775558766No Hit
CATAGACAGCTCACAGACTGCATACTATGTGAGCTTGGGTGACAGAGTGA20490.3869578765474066No Hit
CATAGACCTTCCTGTTGGCCACACAGAGAGGTCTTGGCAGGCTTGTCTAT20260.3826142791044635No Hit
CATAGACCACACCCAAACACCACGTACACTGACGACATGGTGGGTGCCTG19770.3733605280303674No Hit
CATAGATCTTTGGTAGATATGGGGTCTCCTGACGACATGGTGGGTGCCTG18310.3457881268708158No Hit
CATAGAGGGTGTTTTTCGGTGTCACAGTGTAGCTTGGGTGACAGAGTGAG17830.3367232278594563No Hit
CATAGACAGCTCACAGACTGCATACTATGTGTATGGAGACAGCCGCTCAC16670.3148163885820043No Hit
CATAGAACCCAAAGAGTGAGCCCTTGTCCCTTTCTATGAGACCAAGTCTC16550.3125501638291644No Hit
CATAGACCACACCCAAACACCACGTACACTCAGACATGTTTCCTAGTTTC16020.3025410045041217No Hit
CATAGACCACACCCAAACACCACGTACACTGACGACATGGTTCTACACAT15860.29951937150033525No Hit
CATAGAGGGTGTTTTTCGGTGTCACAGAAGAATTAGCGGAGAGTGAGAAC15210.2872439874224526No Hit
CATAGACCTTCCTGTTGGCCACACAGGAAGGCCGCTAAGCCGAGAAGATC15040.2840335023559295No Hit
CATAGATTCTCCCTTGTGCTTTTGGTACACTGACGACATGGTGGGTGCCT14810.2796899049129864No Hit
CATAGACAGGAGGAGGAAGAAGAGGAATTCTTGCCAGGGATCTATGAGAC13890.26231551514121415No Hit
CATAGAGAATTTGCACACCACGGGACATGGATGAAGCTGGACCTATGAGA13490.25476143263174794No Hit
CATAGAACCCAAAGAGTGAGCAGCAGCCCAAAGAGTGAGCCCTTGTCCCT13310.2513620955024881No Hit
CATAGAGGGCCAGAAGTTTGTTTACCTGGGAGAGGCTGTTTGAGATCTAT13040.24626308980859846No Hit
CATAGAGAAGAGAAGGCGACAATGGCTGCTTTTCTCTTCTTGGCATCTAT12860.24286375267933863No Hit
CATAGATTCTCCCTTGTGCTTTTGGTCTCCCTTGTGCTCATACAGAATTA12760.24097523205197208No Hit
CATAGACACTGATAGGTTCCAACTTTCCTGACACTGACGACATGGTGGGT12260.23153262891513932No Hit
CATAGACCCTTAGAGTTTCAGCCTCCAGCAGAATCAGGGTTGGTTCTATG10190.1924402519286517No Hit
CATAGAACCCAAAGAGTGAGCAGCAGCACTGACGACATGGTTCTACACAT9990.18866321067391859No Hit
CATAGAACCCAAAGAGTGAGCAGCAGAAGAGTGAGCCCTTGTCCCTTTCT9500.17940945959982246No Hit
CATAGATGTCTCCCAGGCTAGAGTGAGCCCTTGTCCCTTTCCATGAGACC8790.16600096314551996No Hit
CATAGAATGCAGGAGAATATACACAGGTTAGTGTTACAACCAATGCTCTT8750.16524555489457335No Hit
CATAGAGAAGAGAAGGCGACAATGGGACATGGATGAAGCTGGATCTATGA8720.16467899870636338No Hit
CATAGAACCCAAAGAGTGAGCAGCAGTAGAACCCAAAGAGTGAGCCCTTG8720.16467899870636338No Hit
CATAGAACCCAAAGAGTGAGCAGCAGCATAGAACCCAAAGAGTGAGCCCT8570.16184621776531355No Hit
CATAGAACCCAAAGAGTGGGCAACAGAACAACAACATCTATGAGACCAAG8520.16090195745163027No Hit
CATAGATCTTTGGTAGATATGGGGTCTCCCAGGCTAGAGTGAGCCCTTGT7830.14787116512280105No Hit
CATAGAATCAAAATAGTACCCTTGCCTCTAACTTCAGTTGACTATAAGAA7480.1412613429270181No Hit
CATAGAGCTATCAGTATACTCCCACCATGAACACTGACGACATGGTGGGT7430.14031708261333484No Hit
CATAGAACCCAAAGAGTGAGCAGCAGTTCTACACATAGAACCCAAAGAGT6940.13106333153923874No Hit
CATAGAACCCAAAGAGTGAGCAGCAGAACAACAACATCTATGAGACCAAG6730.12709743822176897No Hit
CATAGAGCTTCTTTCTGTTCATATTGGGGAATTCTTGCCAGGGATCTATG6610.12483121346892911No Hit
CATAGAACCCAAAGAGTGAGCAGCAGGAACCCAAAGAGTGAGCCCTTGTC6500.12275384077882591No Hit
CATAGAGCTTCTTTCTGTTCATATTGAGGAATTCTTGCCAGGGATCTATG6210.1172771309594629No Hit
CATAGAACCCAAAGAGTGAGCAGCAGGTTCTACACATAGAACCCAAAGAG6140.11595516652030632No Hit
CATAGACTTGATGCCCAGGAAACCTCCTGCCCCTGCAGGCTGAAAGTGCC5900.1114227170146266No Hit
CATAGAACCCAAAGAGTGAGCAGCAGCACATAGAACCCAAAGAGTGAGCC5800.10953419638726003No Hit
CATAGAACCCAAAGAGTGAGCAGCAGACCCAAAGAGTGAGCCCTTGTCCC5710.10783452782263014No Hit
CATAGACACTGATAGGTTCCAACTTTCCTGGGAGAGGCTGTCTGAGATCT5630.1063237113207369No Hit
CATAGATTCTCCCTTGTGCTTTTGGTACACTGGGACATGGATGAAGCTGG5570.10519059894431697No Hit
CATAGAACCCAAAGAGTGAGCAGCAGTGGGGACATGGATGAAGCTGGATC5340.10084700150137389No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)