FastQCFastQC Report
Wed 28 Jun 2023
EGAF00005804512

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005804512
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences156279
Sequences flagged as poor quality0
Sequence length150
%GC46

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
CATAGATCATGGGACTTCAGCATGGCGGTGTTTGCAGATTTGGACCTGCG4357327.881545185213625No Hit
CATAGAGAGATTTTGGGCTGAGACGATAATGCCGCATATCTACAACTATC64944.155388759846172No Hit
CATAGATCATGGGACTTCAGCATGGCCAACATGGTGAACCTGTCTCTACT46812.995284075275629No Hit
CATAGAGAGATTTTGGGCTGAGACGATGGGGTTTTCTAGATATACACTCA40672.602396995117706No Hit
CATAGAGCCAAGGAAAGTTGAATGGAGACAGCCGCTCACCTCTATGAGAC32742.0949711733502263No Hit
CATAGAGAGATTTTGGGCTGAGACGATGGGGTTTTCTAGATATACAATCA27691.7718311481389053No Hit
CATAGATCATGGGACTTCAGCATGGAGACAGCCGCTCACCTCTATGAGAC24241.5510721210143397No Hit
CATAGAGAGATTTTGGGCTGAGACGATGGGGTTTTCTAGATATACAACAA23671.5145988904459333No Hit
CATAGACCTGGGCTTAGGGGCTACACATGGCTATGCAATCTATGAGACCA21921.4026196737885448No Hit
CATAGAACTTCACAAGGGCTTTAGGGGCTACACATGGCTATGCAATCTAT21211.3571881058875472No Hit
CATAGACCTGGGCTTAGGGGCTATACATGGCTATGCAATCTATGAGACCA20721.3258339252234785No Hit
CATAGATCATGGGACTTCAGCATGGCCAACATGGTGAAACCCCATCTCTA20291.298319031987663No Hit
CATAGACACCATGCCTGGCTAATTTTTTGCGTTTTTAGTAGAGATGGGGT18251.1677832594270503No Hit
CATAGATCATGGGACTTCAGCATGGCCAACATGGTGAAACCCTGTCTCTA14370.9195093390666693No Hit
CATAGATCATGGGACTTCAGCATGGCTACACATGGCTATGCAATCTATGA14280.9137504079242893No Hit
CATAGACACCATGCCTGGCTAATTTTTGTATTTTTAGTAGAGATAGGGTT14170.9067117143058249No Hit
CATAGATCCCATCCAATAATAATGAGCAAGCAATGGGGAAAGGATTCTAT12800.8190479846940407No Hit
CATAGATCATGGGACTTCAGCATGGCCAACATGGTGAAACCCCGTCTCTA12590.8056104786951542No Hit
CATAGACCTTTGGGTTCATATCATCTGGAGACAGCCGCTCACCTCTATGA10820.6923514995616813No Hit
CATAGACAATTAAATTTTCTTAAGGGGTTGGAGACAGCCGCTCACCTCTA9750.6238842070911639No Hit
CATAGATCCCATCCAATAATAATGAGCAAGCAATGGGCAAGCAATGACAG8450.5406996461456753No Hit
CATAGATGTCAAGAGTCTAATTCCTGCTTCCTTCTGCTGGCTATTCTATG7750.49590795948272004No Hit
CATAGACCTGGGCTTAGGGGCTATACGTGAATGTGGATCAGAACTTCTAT6150.3935269613959649No Hit
CATAGAAAACAGAGTCACAGTCCCCAGTACACTGACTGATACAGGAAGGC5950.38072933663512054No Hit
CATAGACACCATGCCTGGCTAATTTTTGTATTTTTAGTGGAGACAGCCGC5850.3743305242546983No Hit
CATAGACAGGGAGGCGTATAAGTGATGACTGATACAGGAAGGCCTTTCTA5360.34297634359062956No Hit
CATAGACACCATGCCTGGCTAATTTTTGTATTTTTTGTAGAGACAGAGTT4880.31226204416460307No Hit
CATAGAAACCCCAAAGGCTATGTTCAAAATGGTCAAACAGGAGGTCTATG4580.29306560702333645No Hit
CATAGATCATGGGACTTCAGCATGGCACACTGACTGATACAGGAAGGCCT4170.26683047626360545No Hit
CATAGATCATGGGACTTCAGCATGGCTACGGTTGCACAGATCATTTAAGC4040.2585120201690566No Hit
CATAGATCCCATCCAATAATAATGAACAAGCAATGGGGAAAGGATTCTAT3800.24315487045604334No Hit
CATAGAGAGATTTTGGGCTGAGACGATGGCGTATTCTAAATATACAATCA3580.22907748321911453No Hit
CATAGACACCATGCCTGGCTAATTTTTAAATATTTTGTAGAGACCGGGTT3560.2277977207430301No Hit
CATAGACACCATGCCTGGCTAATTTTTTGTATTTTTAGTGGAGACAGCCG3300.2111608085539324No Hit
CATAGATCATGGGACTTCAGCATGGCATAGAGCAGAATTACCTCTGGATG3290.21052092731589014No Hit
CATAGAAAACAGAGTCACAGTCCCCAGTATCCCCAGAAATGTTAGCATGT3270.20924116483980573No Hit
CATAGATCATGGGACTTCAGCATGGCCAACATGGCGAAACCCCATCTCTA3170.20284235245938356No Hit
CATAGATCATGGGACTTCAGCATGGCCAACATGGCAAAACCCTGTCTCTA3110.19900306503113022No Hit
CATAGATCATGGGACTTCAGCATGGCTAATTTTTGTATTTTTAGTAGAGA3090.19772330255504578No Hit
CATAGATCATGGGACTTCAGCATGGCAAAACCCCGTGTCTACTAAAAGTA2770.17724710293769474No Hit
CATAGAGAGATTTTGGGCTGAGACGATGGGGTTCTCTAAATATACACTCA2760.17660722169965254No Hit
CATAGATCATGGGACTTCAGCATGGCTAATTTTTGTATTTTTAGTGGAGA2700.17276793427139925No Hit
CATAGACACCATGCCTGGCTAATTTTAAAATTAGTACCTATAATCTCAGC2610.16700900312901926No Hit
CATAGACACCATGCCTGGCTAATTTTTTGTATTTTTAGTAGAGATGGGGT2500.15997030951055485No Hit
CATAGATCATGGGACTTCAGCATGGCGGTGTTCGCAGATTTGGACCTGCG2460.15741078455838595No Hit
CATAGAAAACAGAGTCACAGTCCCCAGTAATGTACCATGTTTTCATCCTG2430.1554911408442593No Hit
CATAGATCATGGGACTTCAGCATGGCTAATTTTTTGCGTTTTTAGTAGAG2410.15421137836817486No Hit
CATAGACACCATGCCTGGCTAATTTTGTATTTTTAGTAGAGACAGGGTTT2400.15357149713013266No Hit
CATAGATCATGGGACTTCAGCATGGCCAACATGGTGAAACTCCATCTCTA2360.15101197217796378No Hit
CATAGATCCTCTCATTGTCCAGTTTGGAGACAGCCGCTCACCTCTATGAG2280.14589292227362602No Hit
CATAGATCATGGGACTTCAGCATGGCGGTGTTTGCAGATTTGGACCCGCG2260.14461315979754158No Hit
CATAGATCCCATCCAATAATAATGAGCAGAATTACCTCTGGATGGTCTAT2250.14397327855949935No Hit
CATAGATCATGGGACTTCAGCATGGCCAACATGGCAAAACCCCATCTCTA2220.1420536348453727No Hit
CATAGATCATGGGACTTCAGCATGGCCAACATGGCGAAACCCCGTCTCTA2190.14013399113124603No Hit
CATAGATCATGGGACTTCAGCATGGCGAAACCCCATCTCTACTAAAAATA2180.13949410989320382No Hit
CATAGACACCATGCCTGGCTAATTTTTGTATTTTTAGTAGAGACAGGGTT2180.13949410989320382No Hit
CATAGATCATGGGACTTCAGCATGGCGGTGTTTGCGGATTTGGACCTGCG2120.1356548224649505No Hit
CATAGACACCATGCCTGGCTAATTTTTGTATTTTTAGTAGTGGTGTGGTG2110.1350149412269083No Hit
CATAGATCATGGGACTTCAGCATGGCCAGGGAGGCCTCACAATCATGGTG2090.13373517875082383No Hit
CATAGATCATGGGACTTCAGCATGGCGGTGTCTGCAGATTTGGACCTGCG2070.1324554162747394No Hit
CATAGATCATGGGACTTCAGCATGGCACTGGTACCAAAACAGAGATATAG2030.12989589132257054No Hit
CATAGATCATGGGACTTCAGCATGGCCAACATGGTGAAACCTCATCTCTA1990.12733636637040163No Hit
CATAGACACCATGCCTGGCTAATTTTTGTATTTTTAGTAGAGACAGCGTT1970.12605660389431722No Hit
CATAGATCATGGGACTTCAGCATGGCGGTGTTTGCAGATCTGGACCTGCG1840.11773814779976836No Hit
CATAGATCATGGGACTTCAGCATGGCAAAACCTTGACTCCACTAAAAATA1840.11773814779976836No Hit
CATAGATCATGGGACTTCAGCATGGCCAACATGGTGAAACCTCGTCTCTA1840.11773814779976836No Hit
CATAGATCATGGGACTTCAGCATGGCCAACATAGTGAAACCCCATCTCTA1830.11709826656172614No Hit
CATAGATCATGGGACTTCAGCATGGCTCATAGATGGAGACAGCCGCTCAC1830.11709826656172614No Hit
CATAGAGGATCCCATCTGAGTTGGTCTCATAGATGGAGACAGCCGCTCAC1820.11645838532368394No Hit
CATAGATCATGGGACTTCAGCATGGCGGTGTTTGCAGATTTGGGCCTGCG1730.11069945418130396No Hit
CATAGACAATTAAATTTTCTTAAGGGGTTGATTTAATAAATTGTGAAATG1680.10750004799109285No Hit
CATAGATCATGGGACTTCAGCATGGCGGTGCTTGCAGATTTGGACCTGCG1670.10686016675305063No Hit
CATAGATCATGGGACTTCAGCATGGCCAACATGGTGAAACCTTGTCTCTA1660.10622028551500841No Hit
CATAGAGAGATTTTGGGCTGAGACGATGGGGTTTTCTAAATATACAATCA1650.1055804042769662No Hit
CATAGATCATGGGACTTCAGCATGGCCAACATGGTGAAACCCCCTCTCTA1620.10366076056283954No Hit
CATAGATCATGGGACTTCAGCATGGTGGTGTTTGCAGATTTGGACCTGCG1620.10366076056283954No Hit
CATAGATCATGGGACTTCAGCATGGCCAACATAGTGATACACCATCTCTA1590.10174111684871287No Hit
CATAGATCATGGGACTTCAGCATGGCCAGCATGGTGAAACCACGTCTCTA1590.10174111684871287No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)