FastQCFastQC Report
Wed 28 Jun 2023
EGAF00005804517

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005804517
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences138218
Sequences flagged as poor quality0
Sequence length150
%GC41

[WARN]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
CATAGAGGTGAGCGGCTGTCTCCACAAGTCCGCGCAGAGCCTTCAGGTCA2084215.079077978266216No Hit
CATAGACATGATGTGCTATGAAGTTAGAGGAGAATGATATTGTTGCAGAT66834.835115542114631No Hit
CATAGATGAGTGTCCTTGTAGATGTGCAATATGGGCTGGGTGATCTATGT57284.144178037592789No Hit
CATAGAAAAAGAACTGAGGAAAGGCAACCAAAATGTCAGGGGATCCTCTA55193.992967630844029No Hit
CATAGAAGGGTTGAGTCTGGAGGCTGACACCTTCCTCCAGACTCTATGTG47093.4069368678464453No Hit
CATAGAGGCAGAGTCCAAAGTGTCCTCTAGCCAAATTCCTTACCGATCTA34732.512697333198281No Hit
CATAGATGGGATTATAGGTGTGAGCCACCGCGCCTGGCCAAAAATTTCCA23331.687913296386867No Hit
CATAGATGGGATTATAGGTGTGAGCCACTGCGCCTGGCCAAAAATTTCCA22461.6249692514723117No Hit
CATAGAAGTACCATCAGAGTGAACAGGGCAGAGAGTGTGTTGTATTCTAT19621.4194967370385911No Hit
CATAGATCTCCCTAATTAACTAAGCTAATGTTCTGTTTACTCGGAGATTT19061.3789810299671534No Hit
CATAGATACCTGTCCTCTGCCTCGAGGAGAATGATATTGTTGCAGATTTC15281.1055000072349477No Hit
CATAGATGAGTGTCCTTGTAGATGTGCAGGGCAGAGAGTGTGTTGTATTC14881.0765602164696348No Hit
CATAGATCACCAGATGCCAGTTGTGCAATATGGGCTGGGTGATCTATGTG14301.0345975198599315No Hit
CATAGATGGGATTATAGGTGTGAGCCACCACGCCTGGCCAAAAATTTCCA13680.9897408441736967No Hit
CATAGAGGTTTTCTGTTTCTGTGTTAGTTTGCTTTTCTGTTTACTCGGAG12610.9123269038764851No Hit
CATAGATCCCATACTCCTCCATTACCCTTCCACTACCCACCTGCCTCTAT12580.9101564195690865No Hit
CATAGAGGCAGAGTCCAAAGTGTCCTGGGAAAGGTATGTGGCACATCTAT12440.9000274928012271No Hit
CATAGAGGTGAGCGGCTGTCTTCAGCTCTTTGAGGCATCTATGTGTAGAA12380.89568652418643No Hit
CATAGACATGATGTGCTATGAAGTTAGAGGAGGAGCTGACTTACTGTTCT12100.8754286706507112No Hit
CATAGAGCAGCATTTCTCTCCAAGGAACAATGCCTCACACACAGGTCTAT11860.8580647961915235No Hit
CATAGACCCCCTTGAGTTCACTGGACTACGATAGCGAGAAGAGTGGAGGC11850.8573413014223907No Hit
CATAGAGTGCTCTCTTTCCCCACCCTTCCACTACCCACCTGCCTCTATGT11710.8472123746545314No Hit
CATAGAGGTTTTCTGTTTCTGTGTTAGTTTGCTACGGCAACATATCAGAA11510.8327424792718748No Hit
CATAGAGCAGCATTTCTCTCCAAGGAGGAGCTGACTTACTGTTCTATGTG11180.8088671518904917No Hit
CATAGAGGTGGTGGGTACTTGTAGTCCATCCAGTCCAGCTCCTTCTATGT10420.7538815494363976No Hit
CATAGATCTCCCTAATTAACTAAGCTAATGTTCTCATAGGGCACTGAGAC10250.7415821383611396No Hit
CATAGAGGTTTTCTGTTTCTGTGTTAGTTTGCTTCTGTTTACTCGGAGAT10180.7365176749772099No Hit
CATAGAGGCAGAGTCCAAAGTGTCCTTCCACTACCCACCTGCCTCTATGT9910.7169833162106237No Hit
CATAGAGCTCCAAGATTTTTAGCTGTTCTATAGAAGTGTATTAATTATCT9890.7155363266723581No Hit
CATAGAGCTCCAAGATTTTTAGCTGTTCTACACTGGGAAAGGTATGTGGC9110.6591037346799983No Hit
CATAGAGGCACGATCTTGTTTCACTGAGCTGAGGGTCACTTCTATGTGTA8960.648251313143006No Hit
CATAGATGGGAGTTTCTAGCTTTGGTCTGTTTACTCGGAGATTTGACTGT8550.6185880276085604No Hit
CATAGAGGAGTGACTTTTGTTGCTGCACCTTCCACTACCCACCTGCCTCT8150.5896482368432476No Hit
CATAGAAACAGCAAAGCCCTCCACCATACGGCAACATATCAGAAGCATCT7970.5766253309988568No Hit
CATAGAAACAGCAAAGCCCTCCACCAGCACTTACTAACAAAGCGCTTCCT7640.5527500036174738No Hit
CATAGAGCTCCAAGATTTTTAGCTGTTCTATCCCCAGGTAGCAAAACAGA7480.5411740873113488No Hit
CATAGAAGGGTTGAGTCTGGAGGCTGACACCTTCCACTACCCACCTGCCT7260.5252572023904267No Hit
CATAGAGGTGAGCGGCTGTCTCCAGCTCTTTGAGGCATCTATGTGTAGAA7130.5158517703917No Hit
CATAGAGCTCCAAGATTTTTAGCTGTTCTCTATGTGGCCATGCTGAAGTC6710.48546499008812166No Hit
CATAGAGTGAAACCCTGTCTCTACCAAAACTACAAAACTTATCTGGGCAC6610.47823004239679345No Hit
CATAGACACACTGACAATTTGCACCTGGGTAGAGAGTTCTGTAGATGTTC5610.40588056548351154No Hit
CATAGACCAAGAGTTGACAAGGATCTGGAACAATGCCTCACACACAGGTC5230.3783877642564644No Hit
CATAGAAACAGCAAAGCCCTCCACCAGTCCATCCAGTCCAGCTCCTTCTA5210.3769407747181988No Hit
CATAGACCATCCCTTCTACAAGAGGCAGTGTAGGAAACATTGGAAAGATG4810.34800098395288603No Hit
CATAGAGTGATCCTCCTTTCTCAGCCCTGGTCCATCCAGTCCAGCTCCTT4700.340042541492425No Hit
CATAGACCATCCCTTCTACAAGAGGCAGGTGGGTAGAGAGTTCTGTAGAT4670.33787205718502655No Hit
CATAGAGCAGCATTTCTCTCCAAGGAGCATTCTCTCAGGGCTGTTCTCTA4540.32846662518629993No Hit
CATAGAGGCACGATCTTGTTTCACTGTTACGGCAACATATCAGAAGCATC4360.3154437193419091No Hit
CATAGAGTGCTCTCTTTCCCCACCCTACACTGTCTTCAGCTCTTTGAGGC4330.3132732350345107No Hit
CATAGAGTGAAACCCTGTCTCTACCAAAAATACAAAACTTATCTGGGCAC4310.31182624549624505No Hit
CATAGAGTGAAACCCTGTCTCTACCAAAAGTACCAAAACTTATCTGGGCA4300.31110275072711224No Hit
CATAGATATTCTGCCCCCTCCTCTCCTAATTAACTTATCTGGGCACGGTG4200.30386780303578403No Hit
CATAGAAACAGCAAAGCCCTCCACCAACAATGCCTCACACACAGGTCTAT4120.29807984488272155No Hit
CATAGACATGATGTGCTATGAAGTTAGAGGTCACTGACAGGTCTTAAAGC4040.29229188672965895No Hit
CATAGAGTCCTTCCCTCTCACACATGTCGTCAGTGTAACTTATCTGGGCA4030.29156839196052614No Hit
CATAGAGGCACAGGGATAATGAGGGAGATCTATAAGCTTACACTGCACAT4000.2893979076531277No Hit
CATAGATATTCTGCCCCCTCCTCTCCAATAGCATTCTCTCAGGGCTGTTC3800.2749280122704713No Hit
CATAGAGCCCCCAGAGAAGAATGACCAGAGGAGAATGATATTGTTGCAGA3730.26986354888654157No Hit
CATAGAGTGCTCTCTTTCCCCACCCTAACCTCCCACCCCAGCTGTCTATG3610.2611816116569477No Hit
CATAGAGGTTTTCTGTTTCTGTGTTAGTTTGCTAAGTGTAATAGCCTCTA3600.26045811688781495No Hit
CATAGAGTGATCCTCCTTTCTCAGCCTACGATAGCGAGAAGAGTGGAGGC3330.24092375812122876No Hit
CATAGAGGTGGTGGGTACTTGTAGTCCTACGGCAACATATCAGAAGCATC3250.23513579996816622No Hit
CATAGATGGGAGTTTCTAGCTTTGGTCTCATAGGAGGAGCTGACTTACTG3150.22790085227683807No Hit
CATAGATGGGATTATAGGTGTGAGCCATCGCGCCTGGCCAAAAATTTCCA2920.2112604725867832No Hit
CATAGATATTCTGCCCCCTCCTCTCCTACGGCAACATATCAGAAGCATCT2870.20764299874111908No Hit
CATAGAGTGAAACCCTGTCTCTACCAAAAATACAAAAAACTTATCTGGGC2820.204025524895455No Hit
CATAGAGTGCTCTCTTTCCCCACCCTAGCTGTCTATGTGTAGAACCATGT2720.1967905772041268No Hit
CATAGAGGTGGTGGGTACTTGTAGTCCGTGTCCCCAGGTAGCAAAACAGA2700.19534358766586118No Hit
CATAGAGGTGGTGGGTACTTGTAGTCCGGAAGACACAGCACACTCTTCTA2660.19244960858932988No Hit
CATAGAGCTCCAAGATTTTTAGCTGTTCTCTATGTGTAGAACCATGTCGT2540.18376767135973607No Hit
CATAGAGCTCCAAGATTTTTAGCTGTTCTCTAGCATTCTCTCAGGGCTGT2490.18015019751407196No Hit
CATAGAGGCAGAGTCCAAAGTGTCCTTGTAGATGTGCAATATGGGCTGGG2450.1772562184375407No Hit
CATAGACCATCCCTTCTACAAGAGGCACAGGGCAGAGAGTGTGTTGTATT2420.17508573413014225No Hit
CATAGAGGCACAGGGATAATGAGGGAGGCTATTAGTCTATGTGTAGAACC2410.17436223936100942No Hit
CATAGAGTGATCCTCCTTTCTCAGCCTCATAGAGGTTTTCTGTTTACTCG2400.1736387445918766No Hit
CATAGAAACAGCAAAGCCTTCCACTACCCACCTGCCTCTATGTGTAGAAC2370.17146826028447815No Hit
CATAGATACCTGTCCTCTGCCTCGAGGAGGAGCTGACTTACTGTTCTATG2340.16929777597707968No Hit
CATAGATCACCAGATGCCAGTTGTGCGTGTGAGGAAACATTGGAAAGATG2290.16568030213141557No Hit
CATAGAGGTGGTGGGTACTTGTAGTCCGTGTAGAAGTGTATTAATTATCT2270.16423331259314997No Hit
CATAGATGAGTGTCCTTGTAGATGTGCAGAACCACAGGGCAGAGAGTGTG2190.1584453544400874No Hit
CATAGATCACTGATTCTGTATTTGCAAATTCTGTTTACTCGGAGATTTGA2090.1512104067487592No Hit
CATAGACACACTGACAATTTGCACCTGACACTGACGCCATGCTGAAGTCC1950.14108147998089973No Hit
CATAGAGGTGGTGGGTACTTGTAGTCCGTGTGGGGAAAAGGGATAGGAGG1920.13891099567350126No Hit
CATAGAGGTGGTGGGTACTTGTAGTCCCAGCTACTCGGGAGGCTGAGGCA1910.13818750090436846No Hit
CATAGAGGTTTTCTGTTTCTGTGTTAGTTTGCTGAGGATAACGGCTTCCA1830.13239954275130592No Hit
CATAGAAACAGCAAAGCCCTCCACCACCCACCTGCCTCTATGTGTAGAAC1810.13095255321304025No Hit
CATAGAGGTTTTCTGTTTCTGTGTTAGTTTGCTTAGGATAATGGCTTCCA1800.13022905844390747No Hit
CATAGAGTCCTTCCCTCTCACACATGTCGTCAGTGTAGGAATCTTTGGGA1760.12733507936737617No Hit
CATAGAAAAAGAACTGAGGAAAGGCAACTTATCTGGGCACGGTGGTCTAT1750.12661158459824337No Hit
CATAGAGGTGGTGGGTACTTGTAGTCCGTGTAGGAGGAGCTGACTTACTG1740.12588808982911054No Hit
CATAGAGTGAAACCCTGTCTCTACCAAAAATACAAAAACTTATCTGGGCA1730.1251645950599777No Hit
CATAGATGGGAGTTTCTAGCTTTGGTCTATTGTAGAACCATGAGGAATCT1730.1251645950599777No Hit
CATAGAGGTTTTCTGTTTCTGTGTTAGTTTGCTGAGGTTAATGGCTTCCA1670.1208236264451808No Hit
CATAGACCACACACACAACTGAGAGGAGAATGATATTGTTGCAGATTTCT1550.11214168921558697No Hit
CATAGAGGTGGTGGGTACTTGTAGTCCGTGTAGGAATCTTTGGGAGGCTA1550.11214168921558697No Hit
CATAGACCATCCCTTCTACAAGAGGCATTCTCTCAGGGCTGTTCTCTATG1530.11069469967732133No Hit
CATAGAGTGCTCTCTTTCCCCACCCTCACTGAGCTGAGGGTCACTTCTAT1530.11069469967732133No Hit
CATAGAGGTGAGCGGCTGTCTCCAGGGCAGAGAGTGTGTTGTATTCTATG1530.11069469967732133No Hit
CATAGATGGGATTATAGGTGTGAGCCACTGTGCCCGGCTTCCTTGGGACA1450.10490674152425879No Hit
CATAGAGGCACGATCTTGTTTCACTGTGGTCTCATAGGGCACTGAGACCA1390.10056577290946188No Hit
CATAGAGGTGAGCGGCTGTCTCCACCAAAACTACAAAACTTATCTGGGCA1390.10056577290946188No Hit
CATAGAGCTCCAAGATTTTTAGCTGTTCTCCATTCTCTCAGGGCTGTTCT1390.10056577290946188No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)