FastQCFastQC Report
Wed 28 Jun 2023
EGAF00005804518

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005804518
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences18491
Sequences flagged as poor quality0
Sequence length150
%GC45

[OK]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
CATAGATCATGGGACTTCAGCATGGCGGTGTTTGCAGATTTGGACCTGCG500427.06181385538911No Hit
CATAGAGAGATTTTGGGCTGAGACGATAATGCCGCATATCTACAACTATC219011.843599588989239No Hit
CATAGAGAGATTTTGGGCTGAGACGATGGGGTTTTCTAGATATACACTCA8734.721215726569683No Hit
CATAGACACCATGCCTGGCTAATTTTTGTATTTTTAGTAGAGATAGGGTT6023.255637877886539No Hit
CATAGAGAGATTTTGGGCTGAGACGATGGGGTTTTCTAGATATACAACAA4252.2984154453517927No Hit
CATAGAGAGATTTTGGGCTGAGACGATGGGGTTTTCTAGATATACAATCA4012.1686225731436917No Hit
CATAGATCCCATCCAATAATAATGAGCAAGCAATGGGGAAAGGATTCTAT3181.7197555567573415No Hit
CATAGACACCATGCCTGGCTAATTTTTGTATTTTTAGTAGTGGTGTGGTG3051.6494510843112864No Hit
CATAGAACTTCACAAGGGCTTTAGGGGCTACACATGGCTATGCAATCTAT2801.514250175761181No Hit
CATAGATCCCATCCAATAATAATGAGCAAGCAATGGGCAAGCAATGACAG2601.4060894489210969No Hit
CATAGACCTGGGCTTAGGGGCTATACATGGCTATGCAATCTATGAGACCA2211.195176031582932No Hit
CATAGACCTGGGCTTAGGGGCTACACATGGCTATGCAATCTATGAGACCA2181.1789519225569196No Hit
CATAGACACCATGCCTGGCTAATTTTTTGTATTTTTAGTAGAGATGGGGT2011.087015304742848No Hit
CATAGATCATGGGACTTCAGCATGGCCAACATGGTGAAACCCCATCTCTA1820.9842626142447677No Hit
CATAGAAAACAGAGTCACAGTCCCCAGTAATGTTAGCATGTCTATGAGAC1740.940998323508734No Hit
CATAGATCATGGGACTTCAGCATGGCCAACATGGTGAAACCCCGTCTCTA1480.8003893786166243No Hit
CATAGATCCCATCCAATAATAATGAACAAGCAATGGGGAAAGGATTCTAT1470.7949813422746201No Hit
CATAGATCATGGGACTTCAGCATGACGGTGTTTGCAGATTTGGACCTGCG1300.7030447244605484No Hit
CATAGATGTCAAGAGTCTAATTCCTGCTTCCTTCTGCTGGCTATTCTATG1270.6868206154345357No Hit
CATAGACACCATGCCTGGCTAATTTTTGTATTTTTTGTAGAGACAGAGTT1120.6057000703044725No Hit
CATAGACACCATGCCTGGCTAATTTTTGTATTTTTAGTAGAGACAGGGTT1060.5732518522524471No Hit
CATAGATCATGGGACTTCAGCATGGCCAACTAAAAATACAAAACACAAAA880.4759071980963712No Hit
CATAGACACCATGCCTGGCTAATTTTTGTATTTTTAGTAGAGATGGGGTT860.46509112541236275No Hit
CATAGAGAGATTTTGGGCTGAGACGATGGCGTATTCTAAATATACAATCA840.45427505272835433No Hit
CATAGACACCATGCCTGGCTAATTTTTAAAAAGTAGCTGGGCATGGTGGC830.4488670163863501No Hit
CATAGACACCATGCCTGGCTAATTTTTTGCGTTTTTAGTAGAGATGGGGT790.4272348710183333No Hit
CATAGATCATGGGACTTCAGCATGGCCAACATGGTGAACCTGTCTCTACT780.4218268346763291No Hit
CATAGAGAGATTTTGGGCTGAGACGATAATGCCGCATATCTGCAACTATC780.4218268346763291No Hit
CATAGAGAGATTTTGGGCTGAGACGATGGGGTTCTCTAAATATACACTCA630.34070628954626575No Hit
CATAGATCATGGGACTTCAGCATGGCTAACATAGTGAAACCCCGTCTCTA590.31907414417824886No Hit
CATAGACCTGGGCTTAGGGGCTATACGTGAATGTGGATCAGAACTTCTAT580.31366610783624466No Hit
CATAGACACCATGCCTGGCTAATTTTGTATTTTTAGTAGAGACAGGGTTT580.31366610783624466No Hit
CATAGATCATGGGACTTCAGCATGGCCAACATGGTGAAACTCCATCTCTA560.30285003515223624No Hit
CATAGACAGGGAGGCGTATAAGTGATGCACTGACGACATGGTTCTACACA510.2758098534422151No Hit
CATAGAGAGATTTTGGGCTGAGACAATAATGCCGCATATCTACAACTATC510.2758098534422151No Hit
CATAGAAACCCCAAAGGCTATGTTCAAAATGGTCAAACAGGAGGTCTATG500.2704018171002109No Hit
CATAGACACCATGCCTGGCTAATTTTTAAATATTTTGTAGAGACCGGGTT490.2649937807582067No Hit
CATAGATGCCCTTTTTGTGTACTTCCACACTGACGACATGGTTCTACACA490.2649937807582067No Hit
CATAGAGCGATTTTGGGCTGAGACGATAATGCCGCATATCTACAACTATC470.25417770807419826No Hit
CATAGAGATGTTTGATAAGCAGGGTGAAACCCCGTGTCTACTAAAAATAC450.24336163539018982No Hit
CATAGATGCCCTTTTTGTGTACTTCCACTGACGACATGGTTCTACACATA440.2379535990481856No Hit
CATAGACACCATGCCTGGCTAATTTTTCGTATTTTTAGTAGAAACAGCGT430.23254556270618137No Hit
CATAGAGAGATTTTGGGCTGAGACGATGGGGTTTTCTGGATATACAATCA370.20009734465415607No Hit
CATAGACACCATGCCTGGCTAATTTTAAAATTAGTACCTATAATCTCAGC350.18928127197014763No Hit
CATAGACACCATGCCTGGCTAATTTTTGTATTTGTAATTTTTGTATTTTT330.1784651992861392No Hit
CATAGATCATGGGACTTCAGCATGGCCAAGATGGTGAAACACCGTCTCTA330.1784651992861392No Hit
CATAGATCATGGGACTTCAGCATGGCGGTGTTTGCAGACTTGGACCTGCG320.17305716294413498No Hit
CATAGATCATGGGACTTCAGCATGGCCAACGTGGTGAAACTGCCTCTCTA300.16224109026012656No Hit
CATAGAGAGATTTTGGGCTGAGACGAGTACAGCATGGTACTGGTACCAAA290.15683305391812233No Hit
CATAGATCATGGGACTTCAGCATGGCAAAACCCCATCTCTACTAAAAATA290.15683305391812233No Hit
CATAGATCCCATCCAATAATAATGAGCACACTGACGACATGGTTCTACAC270.14601698123411389No Hit
CATAGAAAACAGAGTCACAGTCCCCAGTATCCCCAGAAATGTTAGCATGT260.14060894489210968No Hit
CATAGATCATGGGACTTCAGCATGGCCAACACGGTGAAACGCTGTCTCTA250.13520090855010544No Hit
CATAGACACCATGCCTGGCTAATTTTTGTATTTTTAGTGGTGCACATGCC250.13520090855010544No Hit
CATAGAAAACAGAGTCACAGTCCCCAGTAATGTTAGCATGTCTATATCCC250.13520090855010544No Hit
CATAGAAAACAGAGTCACAGTCCCCAGTAATGTACCATGTTTTCATCCTG250.13520090855010544No Hit
CATAGAGAGATTTTGGGCTGAGACGACACTGACTGATACAGGAAGGCCTT240.12979287220810123No Hit
CATAGATCATGGGACTTCAGCATGGCGGTGTTTGCAGATTTGGACCCGCG240.12979287220810123No Hit
CATAGAAAACAGAGTCACAGTCCCCAGTACACTGACGACATGGTTCTACA230.12438483586609701No Hit
CATAGATCATGGGACTTCAGCATGGCGGTGTTTGCAGATTCGGACCTGCG220.1189767995240928No Hit
CATAGATCATGGGACTTCAGCATGGCGGTGCTTGCAGATTTGGACCTGCG220.1189767995240928No Hit
CATAGAGAGATTTTGGGCTGAGACAATGGGGTTTTCTAGATATACACTCA220.1189767995240928No Hit
CATAGACACCATGCCTGGCTAATTTTTGTATTTTCAGTACAAAATTTCTC210.11356876318208858No Hit
CATAGATCCCATCCAATAATAATGAGCAAGCAATGACAGTCTATGAGACC210.11356876318208858No Hit
CATAGAGATGTTTGATAAGCAGGGTGAAACACCGTCTCTACTAAAAATAC210.11356876318208858No Hit
CATAGACAGGGAGGCGTATAAGTGATGACACTGACGACATGGTTCTACAC200.10816072684008438No Hit
CATAGATCATGGGACTTCAGCATGGCGGTGTTTGCGGATTTGGACCTGCG200.10816072684008438No Hit
CATAGACACCATGCCTGGCTAATTTTTGTATTTTTAGTGGAGACAGCCGC190.10275269049808014No Hit
CATAGATGAAAGCCTGTTGAATTTATGAAATAAATGGGGGCAAGGAAGTC190.10275269049808014No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)