FastQCFastQC Report
Wed 8 May 2024
EGAF00005804520

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005804520
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences93324
Total Bases13.9 Mbp
Sequences flagged as poor quality0
Sequence length150
%GC38

[OK]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
CATAGATCATGGGACTTCAGCATGGCGGTGTTTGCAGATTTGGACCTGCG1137712.19086194333719No Hit
CATAGAGGATCCCCTGACATTTTGGTTGCCTTTCCTCAGTTCTTTTTCTA56686.073464489306073No Hit
CATAGATCACCCAGCCCATATTGCACATCTACAAGGACACTCATCTATGA46825.016930264455017No Hit
CATAGAGTCTGGAGGAAGGTGTCAGCCTCCAGACTCAACCCTTCTATGAG38834.160773220179161No Hit
CATAGAAATCTGCAACAATATCATTCTCCTCTAACTTCATAGCACATCAT34273.6721529295786723No Hit
CATAGAAATCTGCAACAATATCATTCTCCTCGAGGCAGAGGACAGGTATC20562.203077450602203No Hit
CATAGATCGGTAAGGAATTTGGCTAGAGGACACTTTGGACTCTGCCTCTA20452.191290557627191No Hit
CATAGAACAGTCAAATCTCCGAGTAAACAGAATTTGCAAATACAGAATCA17061.8280399468518278No Hit
CATAGAACAGTAAGTCAGCTCCTCCTTGGAGAGAAATGCTGCTCTATGAG16471.7648193390767646No Hit
CATAGATGGAAATTTTTGGCCAGGCGCAGTGGCTCACACCTATAATCCCA15271.6362350520766362No Hit
CATAGAGGCAGGTGGGTAGTGGAAGGTGCAGCAACAAAAGTCACTCCTCT15151.6233766233766231No Hit
CATAGATGGAAATTTTTGGCCAGGCGCGGTGGCTCACACCTATAATCCCA15111.619090480476619No Hit
CATAGAAGTGACCCTCAGCTCAGTGAAACAAGATCGTGCCTCTATGAGAC11631.2461960481762462No Hit
CATAGATCACCCAGCCCATATTGCACAACTGGCATCTGGTGATCTATGAG11411.2226222622262226No Hit
CATAGAACAGTCAAATCTCCGAGTAAACAGAACAGCTAAAAATCTTGGAG10451.1197548326261197No Hit
CATAGATGGAAATTTTTGGCCAGGCGTGGTGGCTCACACCTATAATCCCA9661.035103510351035No Hit
CATAGAGGCAGGTGGGTAGTGGAAGGGTGGGGAAAGAGAGCACTCTATGA9461.0136727958510137No Hit
CATAGACCTGTGTGTGAGGCATTGTTGGTGGAGGGCTTTGCTGTTTCTAT9180.9836697955509837No Hit
CATAGATGCCTCAAAGAGCTGAAGACAGCCGCTCACCTCTATGAGACCAA8940.9579529381509579No Hit
CATAGAGGCAGGTGGGTAGTGGAAGGTGTCAGCCTCCAGACTCAACCCTT8640.9258068664009258No Hit
CATAGAAGGAGCTGGACTGGATGGACTACAAGTACCCACCACCTCTATGA7750.8304401868758304No Hit
CATAGAATACAACACACTCTCTGCCCTGTTCACTCTGATGGTACTTCTAT6900.7393596502507394No Hit
CATAGATGTGCCACATACCTTTCCCAGGACACTTTGGACTCTGCCTCTAT6670.7147143285757147No Hit
CATAGAGCCTCCACTCTTCTCGCTATCTACCATAGACATGTGTGAGAGGG6230.6675667566756676No Hit
CATAGAGGCAGGTGGGTAGTGGAAGGGTAATGGAGGAGTATGGGATCTAT6100.6536367922506536No Hit
CATAGATGCCTCAAAGAGCTGGAGACAGCCGCTCACCTCTATGAGACCAA6060.6493506493506493No Hit
CATAGATTTGTGTGAGAAGGAGCAAGAACATTAGCTTAGTTAATTAGGGA5860.6279199348506279No Hit
CATAGATGCTTCTGATATGTTGCCGTATAGAGAACAGCTAAAAATCTTGG5830.6247053276756247No Hit
CATAGACCACCGTGCCCAGATAAGTTTTGTAGTTTTGGTAGAGACAGGGT5420.5807723629505808No Hit
CATAGACTAATAGCCTCCCAAAGATTCCTTGGAGAGAAATGCTGCTCTAT5390.5775577557755776No Hit
CATAGAATACAACACACTCTCTGCCCTGCACATCTACAAGGACACTCATC5210.5582701127255583No Hit
CATAGATCACTTGACTACAGAAAAAGGTCTGCTGAGATTGGCCTGTGTCT4820.5164802194505165No Hit
CATAGATGCTTCTGATATGTTGCCGTAGCACAACTGGCATCTGGTGATCT4630.4961210406754961No Hit
CATAGAGGCAGGTGGGTAGTGGAAGGACACTTTGGACTCTGCCTCTATGA4500.4821910762504822No Hit
CATAGAAGGAGCTGGACTGGATGGACAGTGAAACAAGATCGTGCCTCTAT4280.4586172903004586No Hit
CATAGACTCTGTTTTGCTACCTGGGGACACTGACGACATGTGTGAGAGGG4240.4543311474004543No Hit
CATAGAACAGTAAGTCAGCTCCTCCTCTAACTTCATAGCACATCATGTCT4150.44468732587544474No Hit
CATAGATCGGTAAGGAATTTGGCTAGAGGGTAATGGAGGAGTATGGGATC3890.41682739702541677No Hit
CATAGATGCTTCTGATATGTTGCCGTCATAGATGCTCAGATCTCAAAAGG3810.4082551112254082No Hit
CATAGACTCTGTTTTGCTACCTGGGGTAGACATGTGTGAGAGGGAAGGAC3760.4028974326004029No Hit
CATAGAAGTGACCCTCAGCTCAGTGAGGGTAATGGAGGAGTATGGGATCT3720.3986112897003986No Hit
CATAGAACAGTAAGTCAGCTCCTCCTCCCTCATTATCCCTGTGCCTCTAT3570.38253825382538253No Hit
CATAGAACAGTCAAATCTCCGAGTAAACAGAACATTAGCTTAGTTAATTA3540.3793236466503793No Hit
CATAGATTTGTGTGAGAAGGAGCAAGAATTTGCAAATACAGAATCAGTGA3410.3653936822253654No Hit
CATAGACGGGCCAGAGAATAGTGCTAGGGTAATGGAGGAGTATGGGATCT3340.3578929321503579No Hit
CATAGAGCAGCCATAGATAATTAATACACTTCTACACTGCCTCTTGTAGA3230.3461060391753461No Hit
CATAGACGGGCCAGAGAATAGTGCTAGGACACTTTGGACTCTGCCTCTAT3190.3418198962753418No Hit
CATAGACAGCTGGGGTGGGAGGTTAGGGTGGGGAAAGAGAGCACTCTATG3130.3353906819253354No Hit
CATAGAACAGTCAAATCTCCGAGTAAACAGAAAAGCAAACTAACACAGAA3030.3246753246753247No Hit
CATAGATCGGTAAGGAATTTGGCTAGAGGTCATTCTTCTCTGGGGGCTCT3020.3236037889503236No Hit
CATAGACCCCATGTGCAGTGTAAGCTACATAGACATGTGTGAGAGGGAAG2960.31717457460031717No Hit
CATAGACAGCTGGGGTGGGAGGTTAGCCTGTCCTCTGCCTCTTGTAGAAG2950.3161030388753161No Hit
CATAGAACATCTACAGAACTCTCTACCCAGGTGCAAATTGTCAGTGTGTC2910.3118168959753118No Hit
CATAGATGCTTCTGATATGTTGCCGTAGGAGAGGAGGGGGCAGAATATCT2880.3086022888003086No Hit
CATAGAGAACAGCCCTGAGAGAATGCTGCAACAGAGAAGTCAAGAGGAAA2860.30645921735030646No Hit
CATAGAGGCAGGTGGGTGGTGGAGGGCTTTGCTGTTTCTATGAGACCAAG2780.2978869315502979No Hit
CATAGAAATCTGCAACAATATCATTCTCCTCTAGATGCTCAGATCTCAAA2770.2968153958252968No Hit
CATAGAAGTGACCCTCAGCTCAGTGACTCTCAGTTGTGTGTGTGGTCTAT2760.29574386010029574No Hit
CATAGACCCCATGTGCAGTGTAAGCTGGGCCAGAGAACAGCTAAAAATCT2700.2893146457502893No Hit
CATAGATGTGCCACATACCTTTCCCACATGTGTGAGAGGGAAGGACTCTA2690.28824311002528824No Hit
CATAGAAGAGTGTGCTGTGTCTTCCGTGTAGGGTGGGGAAAGAGAGCACT2690.28824311002528824No Hit
CATAGACTAATAGCCTCCCAAAGATTCCTTACAGGGTGGGGAAAGAGAGC2590.2775277527752775No Hit
CATAGACCCCATGTGCAGTGTAAGCTACACTGACGACATGTGTGAGAGGG2480.26574085980026574No Hit
CATAGACCACCGTGCCCAGATAAGTTTTGTATTTTTGGTAGAGACAGGGT2470.26466932407526467No Hit
CATAGATCATGGGACTTCAGCATGGCTGAGAAAGGAGGATCACTCTATGA2470.26466932407526467No Hit
CATAGACTCTGTTTTGCTACCTGGGGGCTGGTCATTCTTCTCTGGGGGCT2430.2603831811752604No Hit
CATAGACTCTGTTTTGCTACCTGGGGCTGAGAAAGGAGGATCACTCTATG2410.25824010972525824No Hit
CATAGACAGCTGGGGTGGGAGGTTAGGACACTTTGGACTCTGCCTCTATG2400.25716857400025717No Hit
CATAGAGCTTTAAGACCTGTCAGTGACCTACGGAGATAGAGAGGTTGGTT2380.255025502550255No Hit
CATAGAGCCTCCACTCTTCTCGCTATCGTAAGAACATTAGCTTAGTTAAT2360.2528824311002529No Hit
CATAGAACATCTACAGAACTCTCTACCCAGGGTGGGGAAAGAGAGCACTC2350.2518108953752518No Hit
CATAGAGGCAGGTGGGTAGTGGAAGGCTTTGCTGTTTCTATGAGACCAAG2340.25073935965025074No Hit
CATAGAGAACAGCCCTGAGAGAATGCTATTGTTGCAGATAGACCAAAGCT2310.24752475247524752No Hit
CATAGACCCCATGTGCAGTGTAAGCTGAGAAAGGAGGATCACTCTATGAG2150.23038018087523038No Hit
CATAGATCCCCATCTTTCCAATGTTTCCTTGGAGAGAAATGCTGCTCTAT2060.22073635935022073No Hit
CATAGACTAATAGCCTCCCAAAGATTCCTCTAACTTCATAGCACATCATG2060.22073635935022073No Hit
CATAGAACATCTACAGAACTCTCTACCCACACATAGAGAACAGCTAAAAA2050.21966482362521964No Hit
CATAGAGCCTCCACTCTTCTCGCTATCGTATGGTGGAGGGCTTTGCTGTT2040.2185932879002186No Hit
CATAGAACATCTACAGAACTCTCTACCCACCTGCCTCTTGTAGAAGGGAT2040.2185932879002186No Hit
CATAGAAGAGTGTGCTGTGTCTTCCGTGTGGCTGAGAAAGGAGGATCACT1910.20466332347520466No Hit
CATAGACCACCGTGCCCAGATAAGTTTTGGTACTTTTGGTAGAGACAGGG1870.20037718057520038No Hit
CATAGAACAGTCAAATCTCCGAGTAAACAGAGGAGAGGAGGGGGCAGAAT1850.19823410912519823No Hit
CATAGATCACCCAGCCCATATTGCACATCTACAAGGACACTTTGGACTCT1840.19716257340019716No Hit
CATAGATCACTTGACTACAGAAAAAGGTCTACACTGACGACAGTGAAACA1820.19501950195019502No Hit
CATAGATGGAAATTTTTGGCCAGGCGCGATGGCTCACACCTATAATCCCA1770.18966182332518966No Hit
CATAGAGGCATAGTATTGAAACTGTAGATCACTCAGAACATTAGCTTAGT1750.18751875187518752No Hit
CATAGACCTGTGTGTGAGGCATTGTTACACATAGAACAGCTAAAAATCTT1700.18216107325018216No Hit
CATAGATCGGTAAGGAATTTGGCTAGAGGGTGGGGAAAGAGAGCACTCTA1700.18216107325018216No Hit
CATAGACCACCGTGCCCAGATAAGTTTTTTGTATTTTTGGTAGAGACAGG1650.1768033946251768No Hit
CATAGAGGCATAGTATTGAAACTGTAGATCACTCTAGGCTGAGAAAGGAG1620.1735887874501736No Hit
CATAGAAATCTGCAACAATATCATTCTCCTCGGTAGGGTAATGGAGGAGT1530.16394496592516394No Hit
CATAGACTCTGTTTTGCTACCTGGGGTGGGGAAAGAGAGCACTCTATGAG1530.16394496592516394No Hit
CATAGAGCAGCCATAGATAATTAATACACTTCTCATAGAACAGCTAAAAA1420.15215807295015216No Hit
CATAGATCCCCATCTTTCCAATGTTTCCTCGGAGATATTGGGGATGGCTG1420.15215807295015216No Hit
CATAGAGAACAGCCCTGAGAGAATGCACACATAGAGAACAGCTAAAAATC1410.15108653722515109No Hit
CATAGACTAATAGCCTCCCAAAGATTCCTAATTAACTTAGCAACCTGTAC1400.15001500150015No Hit
CATAGAGAACAGCCCTGAGAGAATGAGAACAGCTAAAAATCTTGGAGCTC1360.14572885860014573No Hit
CATAGATGTGCCACATACCTTTCCCAGTGTAGGGTAATGGAGGAGTATGG1290.13822810852513823No Hit
CATAGACCACCGTGCCCAGATAAGTTTTTGTATTTTTGGTAGAGACAGGG1290.13822810852513823No Hit
CATAGACTAATAGCCTCCCAAAGATTCCTGTTCACTCTGATGGTACTTCT1280.13715657280013716No Hit
CATAGACTAATAGCCTCCCAAAGATTCCTGAAGTTAGAGGACACTTTGGA1240.13287042990013287No Hit
CATAGATCCCCATCTTTCCAATGTTTCCTCTAACTTCATAGCACATCATG1240.13287042990013287No Hit
CATAGAGCTTTAAGACCTGTCAGTGACCCTCAGTCCAGTGAACTCAAGGG1240.13287042990013287No Hit
CATAGATGCCTCAAAGAGCTGAAGACAGAACTGGTGGAGGGCTTTGCTGT1230.1317988941751318No Hit
CATAGAAGTGACCCTCAGCTCAGTGAGGGTGGGGAAAGAGAGCACTCTAT1220.13072735845013073No Hit
CATAGACCACCGTGCCCAGATAAGTTGCCTTTCCTCAGTTCTTTTTCTAT1170.12536967982512537No Hit
CATAGATGCTTCTGATATGTTGCCGTTGCCTTTCCTCAGTTCTTTTTCTA1120.12001200120012002No Hit
CATAGATGCTTCTGATATGTTGCCGTCAGTGTGGCTGAGAAAGGAGGATC1100.11786892975011788No Hit
CATAGAGCAGCCATAGATAATTAATACACTTCTATAGGGTGGGGAAAGAG1100.11786892975011788No Hit
CATAGAACAGTAAGTCAGCTCCTCCTTACACATAGAACAGCTAAAAATCT1070.11465432257511465No Hit
CATAGAAATCTGCAACAATATCATTCTCCTCTATAGGGTGGGGAAAGAGA1060.11358278685011358No Hit
CATAGAATACAACACACTCTCTGCCCTGGAGACAGCCGCTCACCTCTATG1010.10822510822510822No Hit
CATAGACCACCGTGCCCAGATAAGTTTTGTAGTTTTGGTGGAGACAGCCG1000.10715357250010715No Hit
CATAGAGCTTTAAGACCTGTCAGTGACCACACGGACTACAAGTACCCACC990.10608203677510608No Hit
CATAGATCGGTAAGGAATTTGGCTAGAGGAGAGGAGGGGGCAGAATATCT970.10393896532510394No Hit
CATAGACGGGCCAGAGAATAGTGCTAGAATTTGCAAATACAGAATCAGTG970.10393896532510394No Hit
CATAGACTCTGTTTTGCTACCTGGGGTTGGTGGAGGGCTTTGCTGTTTCT940.10072435815010072No Hit

[FAIL]Adapter Content

Adapter graph

Produced by FastQC (version 0.12.1)