FastQCFastQC Report
Wed 8 May 2024
EGAF00005804522

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005804522
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences69329
Total Bases10.3 Mbp
Sequences flagged as poor quality0
Sequence length150
%GC41

[OK]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
CATAGAGAGATTTTGGGCTGAGACGATGAGGTTTTCTAAATATACAATCA893712.890709515498564No Hit
CATAGAGAGATTTTGGGCTGAGACGATAATGCCGCATATCTACAACTATC50267.249491554760635No Hit
CATAGACACCATGCCTGGCTAATTTTTGTATTTTTAGTAGAGACAGCGTT38215.511402154942377No Hit
CATAGATCATGGGACTTCAGCATGGCGGTGTTTGCAGATTTGGACCTGCG36905.322448037617736No Hit
CATAGATGTCCATCATGTGGAAGCTGGAGAGTCACTTCTTTTGATAATTC30764.4368157625236195No Hit
CATAGAGAGATTTTGGGCTGAGACGATGGGGTTTTCTAGATATACACTCA22673.2699159082058014No Hit
CATAGACAGGGAGGCGTATAAGTGATGAAATCTCTACTAAAAATACAAAA21423.089616177934198No Hit
CATAGAAAACAGAGTCACAGTCCCCAGTCAATTCCCAGACATAAGCCAGT19782.853062931817854No Hit
CATAGACACCATGCCTGGCTAATTTTTTGCGTTTTTAGTAGAGATGGGGT14492.0900344733084277No Hit
CATAGACCAATAAAAGTTGATGGGATGAAGTAAGAAACATTTTAGAGCAC11921.7193382278700111No Hit
CATAGAGAGATTTTGGGCTGAGACGATGGGGTTTTCTAGATATACAATCA11461.6529879271300612No Hit
CATAGATCCCATCCAATAATAATGAGCAAGCAATGGGGAAAGGATTCTAT10581.526056917018852No Hit
CATAGAACTTCACAAGGGCTTTAGGGGCTACACATGGCTATGCAATCTAT9251.3342180040098661No Hit
CATAGACCTGGGCTTAGGGGCTATACATGGCTATGCAATCTATGAGACCA8951.2909460687446812No Hit
CATAGAGATGTTTGATAAGCAGGGTGACTAGAGTTAATGGTAATTTATTG8901.283734079533817No Hit
CATAGAGAGATTTTGGGCTGAGACGATGGGGTTTTCTAGATATACAACAA8541.2318077572155952No Hit
CATAGATCCCATCCAATAATAATGAGCAAGCAATGGGCAAGCAATGACAG8281.1943054133191018No Hit
CATAGACCTGGGCTTAGGGGCTACACATGGCTATGCAATCTATGAGACCA8181.1798814348973734No Hit
CATAGAGAGATTTTGGGCTGAGACGATGGAGTTTTCTAGGTATACAATCA8061.1625726607912996No Hit
CATAGACCTTTGGGTTCATATCATCTGGCACAGACCTTGCCTCTTCCAGC7971.149591080211744No Hit
CATAGACACCATGCCTGGCTAATTTTTGTATTTTTAGTAGAGATAGGGTT7491.0803559837874483No Hit
CATAGAACCTCTTTTGGGGCAAAGTTATATACCCACATGTATTAGTTTGC6740.9721761456244862No Hit
CATAGATTCTGAAGAAATCAGATAGAGAGAAACAAATATGCTCCAAATTT5970.8611115117771785No Hit
CATAGATCCCATCCAATAATAATGAACAAGCAATGGGGAAAGGATTCTAT5830.8409179419867587No Hit
CATAGACACCATGCCTGGCTAATTTTTTGTATTTTTAGTAGAGATGGGGT5830.8409179419867587No Hit
CATAGATGCCCTTTTTGTGTACTTCCACGACATGGTTCTACACATAGATG4380.6317702548716987No Hit
CATAGATGAAAGCCTGTTGAATTTATGACATTTTTTATTCTCTCTCTTCA3980.5740743411847856No Hit
CATAGATCATGGGACTTCAGCATGGCCAACATGGTGAACCTGTCTCTACT3800.5481111800256746No Hit
CATAGATGCCCTTTTTGTGTACTTCCACACTGACGACATGGTTCTACACA3690.5322448037617735No Hit
CATAGACACCATGCCTGGCTAATTTTTTTGTGTTTTTGGTAGAGATGGGG3490.503396846918317No Hit
CATAGACACCATGCCTGGCTAATTTTGTATTTTTAGTAGAGACAGGGTTT3380.48753047065441585No Hit
CATAGATCATGGGACTTCAGCATGGCCAACATGGTGAAACCCCATCTCTA3140.452912922442268No Hit
CATAGATGTCAAGAGTCTAATTCCTGCTTCCTTCTGCTGGCTATTCTATG3040.4384889440205398No Hit
CATAGACACCATGCCTGGCTAATTTTAAAATTAGTACCTATAATCTCAGC2870.4139681807036017No Hit
CATAGACACCATGCCTGGCTAATTTTTGTATTTTTAGTAGAGACAGGGTT2790.402428997966219No Hit
CATAGAAAACAGAGTCACAGTCCCCAGTACACTGACTGATACAGGAAGGC2690.38800501954449074No Hit
CATAGAGAGATTTTGGGCTGAGACAATGAGGTTTTCTAAATATACAATCA2480.3577146648588614No Hit
CATAGACACCATGCCTGGCTAATTTTCTGCGTTTTTAGTAGAGATGGGGT2450.3533874713323429No Hit
CATAGATCATGGGACTTCAGCATGGCGAAACCCCCTCTCTACTAAAAATA2430.35050267564799725No Hit
CATAGAAACCCCAAAGGCTATGTTCAAAATGGTCAAACAGGAGGTCTATG2320.3346362993840961No Hit
CATAGACACCATGCCTGGCTAATTTTTGTATTTTTTGTAGAGACAGAGTT2230.32165471880454066No Hit
CATAGAGCGATTTTGGGCTGAGACGATGAGGTTTTCTAAATATACAATCA2190.31588512743584934No Hit
CATAGAGAGATTTTGGGCTGAGACGATGAGGTCTTCTAAATATACAATCA2020.29136436411891126No Hit
CATAGACACCATGCCTGGCTAATTTTTTGTATTAATCCCAGCTACTCAGG2020.29136436411891126No Hit
CATAGACAGAAACCACCCAGACAACCCACAGAGTAGTAAGAAGTAATAAA2020.29136436411891126No Hit
CATAGATCATGGGACTTCAGCATGGCCAACATGGAGAAACCCTGTCTCTA1970.2841523749080472No Hit
CATAGATCCCATCCAATAATAATGAGCATACCTTTCTTACAATAATTGTG1670.24088043964286232No Hit
CATAGACACCATGCCTGGCTAATTTTTAAATATTTTGTAGAGACCGGGTT1630.23511084827417097No Hit
CATAGACCTGGGCTTAGGGGCTATACGTGAATGTGGATCAGAACTTCTAT1500.2163596763259242No Hit
CATAGAGAGATTTTGGGCTGAGACGATGGGGTTTTCTAAATATACAATCA1440.20770528927288723No Hit
CATAGATGCCCTTTTTGTGTACTTCCATAGAAATCTGACATTTCTCATAA1340.19328131085115896No Hit
CATAGAGCGATTTTGGGCTGAGACGATAATGCCGCATATCTACAACTATC1330.19183891300898614No Hit
CATAGATCATGGGACTTCAGCATGGCTAATTTTTGTATTTTTAGTAGAGA1300.18751171948246764No Hit
CATAGAGAGATTTTGGGCTGAGACAATAATGCCGCATATCTACAACTATC1290.18606932164029483No Hit
CATAGAGAGATTTTGGGCTGAGACGATGGCGTATTCTAAATATACAATCA1250.1802997302716035No Hit
CATAGAAAACAGAGTCACAGTCCCCAGTAATGTTAGCATGTCTATGAGAC1180.17020294537639372No Hit
CATAGATCATGGGACTTCAGCATGGCGAAACCCCATCTCTACTAAAACTA1120.16154855832335674No Hit
CATAGAAAACAGAGTCACAGTCCCCAGTAATGTATCCCCAGAAATGTTAG1100.15866376263901108No Hit
CATAGACACCATGCCTGGCTAATTTTTGTATTTTCAGTACAAAATTTCTC1090.15722136479683826No Hit
CATAGACACCATGCCTGGCTAATTTTTGTATTTTTAGTAGTGGTGTGGTG1000.1442397842172828No Hit
CATAGATGCCCTTTTTGTGTACTTCCATGTGCTTCTTTCAAAAGTCTGGT990.14279738637511No Hit
CATAGACACCATGCCTGGCTAATTTTGTATTTTTAGTAGAGATGGGGTTT960.1384701928485915No Hit
CATAGAGATGTTTGATAAGCAGGGTGTTGATTGTGTTATTGGTAAGGGTC950.13702779500641865No Hit
CATAGAAAACAGAGTCACAGTCCCCAGTAATGTACCATGTTTTCATCCTG930.13414299932207302No Hit
CATAGATATCCATCATGTGGAAGCTGGAGAGTCACTTCTTTTGATAATTC910.13125820363772736No Hit
CATAGACCCCATGCCTGGCTAATTTTTGTATTTTTAGTAGAGACAGCGTT890.1283734079533817No Hit
CATAGATCATGGGACTTCAGCATGACGGTGTTTGCAGATTTGGACCTGCG890.1283734079533817No Hit
CATAGAGCCAAGGAAAGTTGAATGGAGACAGCCGCTCACCTCTATGAGAC830.11971902090034472No Hit
CATAGACACCATGCCTGGCTAATTTTTGTATTTTTAGTAGAGATGGGGTT820.11827662305817191No Hit
CATAGACACCATGCCTGGCTAATTTTTGTATTTTTAGTGGTGCACATGCC780.11250703168948059No Hit
CATAGAGAGATTTTGGGCTGAGACGATGCATGGTACTGGTACCAAAACAG770.11106463384730775No Hit
CATAGATCATGGGACTTCAGCATGGCCAACATGGTGAAACCCTCTCTGTA730.10529504247861646No Hit
CATAGATCATGGGACTTCAGCATGGCCAACATGGAGAAACCCCATCTCTA710.10241024679427081No Hit

[FAIL]Adapter Content

Adapter graph

Produced by FastQC (version 0.12.1)