FastQCFastQC Report
Wed 28 Jun 2023
EGAF00005804525

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005804525
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences199125
Sequences flagged as poor quality0
Sequence length150
%GC40

[FAIL]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
CATAGAGGTGAGCGGCTGTCTCCACAAGTCCGCGCAGAGCCTTCAGGTCA2342811.765473948524797No Hit
CATAGACATGATGTGCTATGAAGTTAGAGGAGAATGATATTGTTGCAGAT143167.189453860640302No Hit
CATAGATGAGTGTCCTTGTAGATGTGCAATATGGGCTGGGTGATCTATGT101135.078719397363465No Hit
CATAGAAGGGTTGAGTCTGGAGGCTGACACCTTCCTCCAGACTCTATGTG79844.009541745134966No Hit
CATAGAAAAAGAACTGAGGAAAGGCAACCAAAATGTCAGGGGATCCTCTA71263.5786566227244196No Hit
CATAGAGCTCCAAGATTTTTAGCTGTTCTGTTTACTCGGAGATTTGACTG57522.8886377903327056No Hit
CATAGAAGTACCATCAGAGTGAACAGGGCAGAGAGTGTGTTGTATTCTAT54142.718895166352793No Hit
CATAGAGGCAGAGTCCAAAGTGTCCTCTAGCCAAATTCCTTACCGATCTA49392.4803515379786565No Hit
CATAGAGCAGCATTTCTCTCCAAGGAGGAGCTGACTTACTGTTCTATGTG48252.4231010671688638No Hit
CATAGATCACTGATTCTGTATTTGCAAATTCTGTTTACTCGGAGATTTGA40102.0138104205900818No Hit
CATAGATCACTGATTCTGTATTTGCAAATTCTTCATAGAGGAGAATGATA36231.819460138104206No Hit
CATAGATGGGATTATAGGTGTGAGCCACTGCGCCTGGCCAAAAATTTCCA35341.774764595103578No Hit
CATAGATGGGATTATAGGTGTGAGCCACCGCGCCTGGCCAAAAATTTCCA34891.752165725047081No Hit
CATAGAGGAGTGACTTTTGTTGCTGCACCTTCCACTACCCACCTGCCTCT29721.492529817953547No Hit
CATAGAGGCACGATCTTGTTTCACTGAGCTGAGGGTCACTTCTATGTGTA25281.2695543000627747No Hit
CATAGATGGGATTATAGGTGTGAGCCACCACGCCTGGCCAAAAATTTCCA23291.1696170747018204No Hit
CATAGAGTGCTCTCTTTCCCCACCCTTCCACTACCCACCTGCCTCTATGT22451.1274325172630257No Hit
CATAGAGGCAGAGTCCAAAGTGTCCTGGGAAAGGTATGTGGCACATCTAT17970.9024482109227872No Hit
CATAGAAGGGTTGAGTCTGGAGGCTGACACCTTCCACTACCCACCTGCCT17450.8763339610797237No Hit
CATAGAGCTCCAAGATTTTTAGCTGTTCTATGTCTGTTTACTCGGAGATT17260.8667922159447583No Hit
CATAGAGGTGAGCGGCTGTCTTCAGCTCTTTGAGGCATCTATGTGTAGAA17200.8637790332705586No Hit
CATAGAGTGCTCTCTTTCCCCACCCTAACCTCCCACCCCAGCTGTCTATG16710.839171374764595No Hit
CATAGAGGTTTTCTGTTTCTGTGTTAGTTTGCTTCTGTTTACTCGGAGAT15340.7703703703703704No Hit
CATAGATGAGTGTCCTTGTAGATGTGCAGGGCAGAGAGTGTGTTGTATTC15330.7698681732580038No Hit
CATAGATGGGAGTTTCTAGCTTTGGTCTATGAGGAATCTTTGGGAGGCTA14930.7497802887633396No Hit
CATAGATCCCATACTCCTCCATTACCCTTCCACTACCCACCTGCCTCTAT13220.6639045825486504No Hit
CATAGAGGTTTTCTGTTTCTGTGTTAGTTTGCTTTCTGTTTACTCGGAGA11440.5745134965473949No Hit
CATAGAGTGAAACCCTGTCTCTACCAAAACTACAAAACTTATCTGGGCAC10770.5408662900188324No Hit
CATAGAAGCCTTTTGAGATCTGAGCATCTACGGCAACATATCAGAAGCAT10660.5353421217827997No Hit
CATAGAGGTGGTGGGTACTTGTAGTCCATCCAGTCCAGCTCCTTCTATGT10620.5333333333333333No Hit
CATAGAGCTCCAAGATTTTTAGCTGTTCTCTATGCATTCTCTCAGGGCTG10500.527306967984934No Hit
CATAGAGGTGAGCGGCTGTCTCCAGCTCTTTGAGGCATCTATGTGTAGAA10030.5037037037037037No Hit
CATAGATGGGAGTTTCTAGCTTTGGTCTAGGAATCTTTGGGAGGCTATTA10030.5037037037037037No Hit
CATAGATCACCAGATGCCAGTTGTGCAATATGGGCTGGGTGATCTATGTG9880.4961707470182046No Hit
CATAGAGGCAGAGTCCAAAGTGTCCTTCCACTACCCACCTGCCTCTATGT9330.46854990583804146No Hit
CATAGAGTGAAACCCTGTCTCTACCAAAAATACAAAACTTATCTGGGCAC7770.3902071563088512No Hit
CATAGAGTGAAACCCTGTCTCTACCAAAAGTACCAAAACTTATCTGGGCA7170.360075329566855No Hit
CATAGACCCCCTTGAGTTCACTGGACCCCCTCTAGCCAAATTCCTTACCG7040.3535467671060891No Hit
CATAGAAACAGCAAAGCCCTCCACCACCCACCTGCCTCTATGTGTAGAAC6790.34099183929692406No Hit
CATAGATCTCCCTAATTAACTAAGCTAATGTTCTGTTTACTCGGAGATTT6560.32944130571249214No Hit
CATAGACACACTGACAATTTGCACCTGTACTTTTCTAATCAATAGTACCC6030.3028248587570621No Hit
CATAGAGCTCCAAGATTTTTAGCTGTTCTATGCTCTGTTTACTCGGAGAT6000.3013182674199623No Hit
CATAGATCCCATACTCCTCCATTACCCTATAGAAGTGTATTAATTATCTA5980.3003138731952291No Hit
CATAGAAGTACCATCAGAGTGAACAGGCTACGGCAACATATCAGAAGCAT5670.2847457627118644No Hit
CATAGAAACAGCAAAGCCTTCCACTACCCACCTGCCTCTATGTGTAGAAC5590.2807281858129316No Hit
CATAGAGTGAAACCCTGTCTCTACCAAAAATACAAAAAACTTATCTGGGC5510.27671060891399873No Hit
CATAGAAACAGCAAAGCCCTCCACCAGTCCATCCAGTCCAGCTCCTTCTA5430.27269303201506595No Hit
CATAGAGTGATCCTCCTTTCTCAGCCTTTCTGTTTACTCGGAGATTTGAC4670.234526051475204No Hit
CATAGATATTCTGCCCCCTCCTCTCCTACGATAGCGAGAAGAGTGGAGGC4280.21494036409290648No Hit
CATAGAAACAGCAAAGCCCTCCACCAGGTTTTCTGTTTACTCGGAGATTT4260.21393596986817326No Hit
CATAGATGGGATTATAGGTGTGAGCCATCGCGCCTGGCCAAAAATTTCCA4120.20690521029504083No Hit
CATAGAGGTGGTGGGTACTTGTAGTCCGTGTTGAAGCAGAGGTAGATGGA3990.20037664783427497No Hit
CATAGAGGCAGAGTCCAAAGTGTCCTACTTGGTCACTGACAGGTCTTAAA3940.19786566227244196No Hit
CATAGAGTGAAACCCTGTCTCTACCAAAAATACAAAAACTTATCTGGGCA3870.19435028248587569No Hit
CATAGAGGCACAGGGATAATGAGGGAGATTAGGAATCTTTGGGAGGCTAT3860.19384808537350912No Hit
CATAGACATGATGTGCTATGAAGTTAGAGGAGGAGCTGACTTACTGTTCT3790.19033270558694287No Hit
CATAGAGGCAGAGTCCAAAGTGTCCTTGTAGATGTGCAATATGGGCTGGG3650.18330194601381042No Hit
CATAGACCATCCCTTCTACAAGAGGCAGGTGGGTAGAGAGTTCTGTAGAT3540.17777777777777778No Hit
CATAGAGGTGGTGGGTACTTGTAGTCCGTGCAGGGCAGAGAGTGTGTTGT3530.1772755806654112No Hit
CATAGAGGTTTTCTGTTTCTGTGTTAGTTTGCTAAGTGTAATAGCCTCTA3500.17576898932831136No Hit
CATAGACCACACACACAACTGAGAGGAGAATGATATTGTTGCAGATTTCT3440.17275580665411175No Hit
CATAGACCATCCCTTCTACAAGAGGCACAGGAATCTTTGGGAGGCTATTA3430.17225360954174512No Hit
CATAGAGTGCTCTCTTTCCCCACCCTCTAGCCAAATTCCTTACCGATCTA3360.1687382297551789No Hit
CATAGAAAAAGAACTGAGGAAAGGCAACTTATCTGGGCACGGTGGTCTAT3170.15919648462021344No Hit
CATAGATGGGAGTTTCTAGCTTTGGTCTCATAGATGGGTAGAGAGTTCTG3110.1561833019460138No Hit
CATAGAGGTGAGCGGCTGTCTCCACCAAAACTACAAAACTTATCTGGGCA2960.14865034526051474No Hit
CATAGAGCTCCAAGATTTTTAGCTGTTCTCGCATTCTCTCAGGGCTGTTC2850.1431261770244821No Hit
CATAGAGCTCCAAGATTTTTAGCTGTTCTCTATGTGCATTCTCTCAGGGC2840.1426239799121155No Hit
CATAGAGTGCTCTCTTTCCCCACCCCAGGTAGCAAAACAGAGTCTATGTG2800.1406151914626491No Hit
CATAGATCACCAGATGCCAGTTGTGCTATGAAGCAGAGGTAGATGGATCA2740.13760200878844947No Hit
CATAGAGTGATCCTCCTTTCTCAGCCCCCCAGGTAGCAAAACAGAGTCTA2710.13609541745134965No Hit
CATAGAAACAGCAAAGCCCTCCACCAGCACTTACTAACAAAGCGCTTCCT2630.1320778405524168No Hit
CATAGACCATCCCTTCTACAAGAGGCACGATCTGTTTACTCGGAGATTTG2490.12504708097928438No Hit
CATAGAGGTTTTCTGTTTCTGTGTTAGTTTGCTTAGGATAATGGCTTCCA2400.12052730696798493No Hit
CATAGAGTGCTCTCTTTCCCCACCCTTGAGGTCACTGACAGGTCTTAAAG2250.11299435028248588No Hit
CATAGAAGTACCATCAGAGTGAACCGGGCAGAGAGTGTGTTGTATTCTAT2180.10947897049591966No Hit
CATAGACCCCCTTGAGTTCACTGGACTGAGGGTCACTGACAGGTCTTAAA2170.10897677338355305No Hit
CATAGAGGCAGAGTCCAAAGTGTCCTCAGTGTAGACCTTTTTCTGTAGTC2140.10747018204645324No Hit
CATAGATGGGAGTTTCTAGCTTTGGTCTCATAGATGGGAAAGGTATGTGG2120.10646578782172002No Hit
CATAGATATTCTGCCCCCTCCTCTCCCTAACCTCCCACCCCAGCTGTCTA2100.10546139359698682No Hit
CATAGAGCTCCAAGATTTTTAGCTGTTCTCATTCTCTCAGGGCTGTTCTC2050.1029504080351538No Hit
CATAGAGGTGGTGGGTACTTGTAGTCCGTGTCAGGGCAGAGAGTGTGTTG2040.10244821092278719No Hit
CATAGATGGGATTATAGGTGTGAGCCACAGCGCCTGGCCAAAAATTTCCA2010.10094161958568738No Hit
CATAGAGCTCCAAGATTTTTAGCTGTTCTCTATGTGTAGAACCATGTCGT2000.10043942247332077No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)