FastQCFastQC Report
Wed 28 Jun 2023
EGAF00005804529

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005804529
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences173839
Sequences flagged as poor quality0
Sequence length150
%GC36

[FAIL]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
CATAGATCTCACAGAAACTTCCTTGATGTTCGCACCCAAGCTCTATGTGT171099.841865174097872No Hit
CATAGAGGGGCCTGGTTATTACTTGGAGGCTGGAGAAAAAGCTCTATGTG91685.2738453396533576No Hit
CATAGAGCTCATTCAACTAATAACTGGTAGACCATGGAGAGAATAATCCG87285.02073757902427No Hit
CATAGATTCTTTCCTGGCTGTGGGTGGGTTGAGGGAGTCTTCTCTATGTG75704.354603972641352No Hit
CATAGAGCTAATAAAGACATACCTGAGCCATGCTGAAGTCCCATGATCTA57083.283497949251894No Hit
CATAGAAGGAACAGCAGAGAGGGCAGGCCCTTCAGCATCATTTCTATGTG54003.1063225168115323No Hit
CATAGAATCTGGTTCAAGCACACAGTTGTGGAAAGTGCAATGAGTCTATG49552.8503385316298413No Hit
CATAGAAGTATTCACACTGGGGCCCAGAACCCATTGTAGATTTCTTTCAC49112.8250277555669325No Hit
CATAGACCTCCCATGGTTCCTGATGAGCATGCCTTTGATAAAACATCTAT43452.4994391362122426No Hit
CATAGAACACGAAGATTTCAGATTAGCCTCTCCAGTTTCTACGTGATCTA38902.2377027019253446No Hit
CATAGATCTCACAGAAACTTCCTTGATGAGCATGCCTTTGATAAAACATC31751.826402590903077No Hit
CATAGATGAAGGCAGAAAAGGAAGAACAACAACAAAACTCGTGACTTCTA30871.7757810387772595No Hit
CATAGAGGCTTCCAGTCCTTTAAAATAAATGAGCATGCCTTTGATAAAAC28121.6175886883840795No Hit
CATAGATGGGACAGCGACAATGACAGTTGTGGAAAGTGCAATGAGTCTAT27811.5997560961579393No Hit
CATAGACCCTCTCTTACCCTTCCACCAACATGCTTTTAGTCACGTCTATG27011.5537365033162869No Hit
CATAGATGGTATTTGAGTGGGGAAACAGGCCCTTCAGCATCATTTCTATG24951.4352360517490321No Hit
CATAGAGGCTTCCAGTCCTTTAAAATAAATGATGGGAGTGTCTGCTGGTC20661.1884559851356715No Hit
CATAGAAATTTTTCAGAGACAGTTGGGACAGTTGTGGAAAGTGCAATGAG17090.983093552079798No Hit
CATAGAAGTATTCACACTGGGGCCCATTGTAGATTTCTTTCACCTCCTCT16370.9416759185223108No Hit
CATAGACCTCCCATGGTTCCTGATGATGGGAGTGTCTGCTGGTCTATGTG15810.9094622035331542No Hit
CATAGATCTAGCCCATCACTTCAGCATCATTTCTATGTGTAGAACCATGT15400.8858771622018073No Hit
CATAGATTCCTCCAAAGACTGCAGGGTCCTAAATGTCTTTGTCCTTCTAT15300.8801247130966009No Hit
CATAGATCTAGCCCATCACTTCAGCAGGCCCTTCAGCATCATTTCTATGT14490.8335298753444279No Hit
CATAGAGTGTGTAGTGTGGTATAGCGTCAGTGTATGTGCTCGTATCTTGG14200.8168477729393289No Hit
CATAGAGGGGTAATACTTCCTACTTCTGCATTAGGAAGTCTTCTCAGCTT14000.8053428747289159No Hit
CATAGATTCAGAGAAGGACAGCGTGGGTTGAGGGAGTCTTCTCTATGTGT13650.7852093028606929No Hit
CATAGAGTGTGTAGTGTGGTATAGCGTCAGTGTAGCCCGTTCTCTCTGTT13450.7737044046502798No Hit
CATAGATCTCACAGAAACTTCCTTGATGATGGGAGTGTCTGCTGGTCTAT11740.675337524951248No Hit
CATAGATTCAGAGAAGGACAGCGTGGGCTGGTGTTTTCCTTGATCTATGT10460.6017061764046042No Hit
CATAGATTCAGAGAAGGACAGCGTGGTGCTGGAATAGTTGGACTCTATGT10420.5994051967625216No Hit
CATAGAGTGTGTAGTGTGGTATAGCGTCAGTGTACCCTGGGAGAAGAAAT10090.5804221147153401No Hit
CATAGAACATTGATTCCTGGCATGTCAGACCCAGGCTACACATCTATGTG9530.5482083997261834No Hit
CATAGATTCAGAGAAGGACAGCGTGGGTCCTAAATGTCTTTGTCCTTCTA9030.5194461542001507No Hit
CATAGACCCCATGACTCAGCTCCTCAATCCTGTGTTCATGGCTTCTATGT8810.5067907661686963No Hit
CATAGAGCAACAATGAAGGTGCATAAAAACTGTCGGAGGTCTATGTGTAG8370.48147999010578757No Hit
CATAGATGGCCCAGAATCCTTTGTAGATTTCTTTCACTCTCCCACCATTC8110.46652362243225054No Hit
CATAGAACATTGATTCCTGGCATGTCCCACTGACGAATGAGGAAACAGGC7830.45041676493767224No Hit
CATAGAGTGTGTAGTGTGGTATAGCGTCAGTGTAACTGGCTTGATTGCAC7590.43661088708517654No Hit
CATAGACCAGTACGCCTTACCCCTTGGAGGCTGGAGAAAAAGCTCTATGT7570.4354603972641352No Hit
CATAGAAGTCTCGCTCTGTCATGCAACAACAACAAAACTCGTGACTTCTA7300.41992878468007755No Hit
CATAGATTCAGAGAAGGACAGCGTGGTCACATAGGTTGCTAGACAGATTT7230.41590207030643295No Hit
CATAGATTCAGTTTACTTAGAGGCAGACAGTTGTGGAAAGTGCAATGAGT6800.39116653915404487No Hit
CATAGAGGCTGCAGTGAACAATGATCGTCAGTGTATGATGGGAGTGTCTG6300.36240429362801213No Hit
CATAGAGGCTGCAGTGAACAATGATCGTCAGTGGCCTCTCCAGTTTCTAC6260.36010331398592954No Hit
CATAGATGGGACAGCGACAATGACAGTGTACCCTGGGAGAAGAAATGTTG5920.3405449870282273No Hit
CATAGATTCTTTCCTGGCTGTGGGTGGGCTGGTGTTTTCCTTGATCTATG5430.3123579864127152No Hit
CATAGAGCAACCCCAGCAGTTTGAGAAAAGATGCAGTACAGCTCTATGTG5400.31063225168115327No Hit
CATAGATTCCTCCAAAGACTGCAGGGCCATGCTGAAGTCCCATGATCTAT5150.29625112891813693No Hit
CATAGAAATTTTTCAGAGACAGTTGGGACACACTGTCAGACCCAGGCTAC5070.29164916963397164No Hit
CATAGAGCAGCTTGAATTCTCCTCAGACCATGGAGAGAATAATCCGTCTA4970.2858967205287651No Hit
CATAGATCTAGCCCATCACTTCAGCATAGCCCGTTCTCTCTGTTGTGTCT4920.28302049597616186No Hit
CATAGATGGGACAGCGACAATGACAGTGTATGAGCATGCCTTTGATAAAA4910.2824452510656412No Hit
CATAGAGGCTGCAGTGAACAATGATCGTCAGTGTGTCTGAGAAAAGATGC4880.28071951633407927No Hit
CATAGAGGTGAGCGGCTGTCTCCACAAGTCCGCGCAGAGCCTTCAGGTCA4800.276117557049914No Hit
CATAGACCAGTACGCCTTACCCCTTGGGTAGCCCGTTCTCTCTGTTGTGT4650.2674888833921042No Hit
CATAGAAATTTTTCAGAGACAGTTGGGACAGTGCATAAAAACTGTCGGAG4630.26633839357106287No Hit
CATAGACCCCATGACTCAGCTCCTCATACACTGTCATTGTGGGTTTTAAC4600.2646126588395009No Hit
CATAGAGGCTGCAGTGAACAATGATCGTCAGTGTACCCTGGGAGAAGAAA4360.2508067809870052No Hit
CATAGAGCTAATAAAGACATACCTGAGCCAGTGTATGAGCATGCCTTTGA4310.24793055643440196No Hit
CATAGATCTAGCCCATCACTTCAGCATCATTTGGGCTGGTGTTTTCCTTG3990.229522719297741No Hit
CATAGAGCTAATAAAGACATACCTGAGCCATGTCGTCAGTGTACCCTGGG3970.2283722294766997No Hit
CATAGACCAGTACGCCTTACCCCTTGACACTGTCATTGTGGGTTTTAACT3930.2260712498346171No Hit
CATAGATGGCAAATGGTGGGATCTCTATGTGTAGAACCATGTCGTCAGTG3900.22434551510305514No Hit
CATAGAGGCTGCAGTGAACAATGATCGTCAGTGTATGAGCATGCCTTTGA3860.2220445354609725No Hit
CATAGAGGCTGCAGTGAACAATGATCGTCAGTGTTGTATGCTTTATTCTC3750.2157168414452453No Hit
CATAGAGTGTGTAGTGTGGTATAGCGTCAGTGTACGAATGAGGAAACAGG3630.20881390251899748No Hit
CATAGATGGCAAATGGTGGGATCTCTACACTGTCATTGTGGGTTTTAACT3620.20823865760847682No Hit
CATAGATCTAGCCCATCACTTCAGCAGCAGGCCCTTCAGCATCATTTCTA3590.20651292287691483No Hit
CATAGACCAGTTACCACAAGAAGCAATGACACTGTCATTGTGGGTTTTAA3590.20651292287691483No Hit
CATAGATTCCTCCAAAGACTGCAGGGGTCAGTCTTCAGCCCACCCATGCC3420.19673375939806373No Hit
CATAGAAGGAACAGCAGAGAGGGCAGGCGTACTGACCAACATGCTTTTAG3240.18637935100869193No Hit
CATAGACCAGTACGCCTTACCCCTTGTTATAGAAAACAAGGAGAACATCT3100.1783259222614028No Hit
CATAGAGCTCATTCAACTAATAACTGGTAGACCCTGGGAGAAGAAATGTT3100.1783259222614028No Hit
CATAGAAGCATCCAGGTTTCTCATTTGTACACTGTCATTGTGGGTTTTAA2980.17142298333515496No Hit
CATAGAGCTAATAAAGACATACCTGAGCCAGGTGCGATGGCTTTCTGACT2970.17084773842463427No Hit
CATAGAACAACTTGCTCTAATACTTGGGAGAGGAAATGATTTCCCTTGAA2940.16912200369307231No Hit
CATAGATCTAGCCCATCACTTCAGCATCATTTCTATGCAGGCCCTTCAGC2930.16854675878255168No Hit
CATAGAGCTAATAAAGACATACCTGAGCCAGTGTGTTTACCTCTCAGTTA2830.16279430967734512No Hit
CATAGATGGTATTTGAGTGGGGAAACAGACGAATGAGGAAACAGGCACTC2800.16106857494578317No Hit
CATAGAGTGTGTAGTGTGGTATAGCGTCAGTGACAGTTGTGGAAAGTGCA2760.15876759530370055No Hit
CATAGAGCTCATTCAACTAATAACTGGTAGACCATGTCGCAGTGGTAAAG2730.1570418605721386No Hit
CATAGACCAGTACGCCTTACCCCTTGTACGGTAGCAGGCCCTTCAGCATC2610.15013892164589074No Hit
CATAGAGTGTGTAGTGTGGTATAGCGTCAGTGATGAGCATGCCTTTGATA2580.14841318691432878No Hit
CATAGATGGTATTTGAGTGGGGAAACAGACACGAATGAGGAAACAGGCAC2550.1466874521827668No Hit
CATAGATGAAGGCAGAAAAGGAAGAACATCATGCCTGGCCAACTGTTTTT2530.1455369623617255No Hit
CATAGATGGCAAATGGTGGGATCTCTATGTACAGTTGTGGAAAGTGCAAT2510.1443864725406842No Hit
CATAGAGCAAGCCCTCTAAGCCTATCACTCTCCCACCATTCAGACTCTAT2490.14323598271964288No Hit
CATAGATGGTATTTGAGTGGGGAAACAGACACTCTATGTGTAGAACCATG2330.1340320641513124No Hit
CATAGAGCAACCCCAGCAGTCTGAGAAAAGATGCAGTACAGCTCTATGTG2320.13345681924079178No Hit
CATAGATCTAGCCCATCACTTCAGCATCCAGGCCCTTCAGCATCATTTCT2210.12712912522506456No Hit
CATAGATGGCCCAGAATCCTTTGTAGAACCATGAGCATGCCTTTGATAAA2090.12022618629881673No Hit
CATAGAGGGGCCTGGTTATTACTTGGAACACTGACGAATGAGGAAACAGG2040.11734996174621345No Hit
CATAGAGGGGTAATACTTCCTACTTCTGCATAAAAACTGTCGGAGGTCTA2000.11504898210413082No Hit
CATAGAGGGGTAATACTTCCTACTTCTGCAGGCCCTTCAGCATCATTTCT1970.11332324737256888No Hit
CATAGAGCTAATAAAGACATACCTGAGCCAGTGTGCAGGCCCTTCAGCAT1960.11274800246204822No Hit
CATAGATCTAGCCCATCACTTCAGCACTCTCCCACCATTCAGACTCTATG1910.10987177790944494No Hit
CATAGAGTGTGTAGTGTGGTATAGCGTCAGTGTGTTATAGAAAACAAGGA1910.10987177790944494No Hit
CATAGAACACGAAGATTTCAGATTAGCCTCCAGCAGGCCCTTCAGCATCA1840.10584506353580037No Hit
CATAGACCAGTTACCACAAGAAGCAATGAGTACAGTTGTGGAAAGTGCAA1790.10296883898319709No Hit
CATAGATCTAGCCCATCACTTCAGCATCGCAGGCCCTTCAGCATCATTTC1770.10181834916215579No Hit
CATAGAAGGAACAGCAGAGAGGGCAGTTGTGGAAAGTGCAATGAGTCTAT1760.10124310425163514No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)