FastQCFastQC Report
Wed 8 May 2024
EGAF00005804530

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005804530
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences434216
Total Bases65.1 Mbp
Sequences flagged as poor quality0
Sequence length150
%GC43

[WARN]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
CATAGATCATGGGACTTCAGCATGGCGGTGTTTGCAGATTTGGACCTGCG8595519.79544742708698No Hit
CATAGAGGGCTGTTTTGAGTGTTTGCCGTGGAGGAAAGGAGGTCTATGAG288116.635176962617684No Hit
CATAGAACCAGAGTAATGAGGGATGCTCAGGTCTCCAATGGTGTCTATGA221785.1075962193931135No Hit
CATAGAGCTTCTGATCACTTTCGCCCCACCCTTATGATCGTATCTATGAG204974.720461705694862No Hit
CATAGAACTTGTAATCATTCCCTACTTCCCACACTCATGCAAAGCTGGTC189724.369254011828215No Hit
CATAGATGTGGCTATGCAGACTGAGCAGAGTTGGGTGTGTCTATGAGACC135583.1224091235698364No Hit
CATAGAACCAGAGTAATGAGGGATGCTCTCTCCAGAACCCACCATCTATG116782.6894448845735766No Hit
CATAGAACTTTGTGCCCCCAGTGTCTTAGGTAGAGGAGTTTCAAACATCT86031.9812719936621406No Hit
CATAGATCATGCAAAGAACACAGGCCACACTCATGCAAAGCTGGTCTATG61771.4225638852552647No Hit
CATAGATGTGCCTCTCCAACATTCATTTCCCCTCTCTCTGAATAACTCTA52071.1991727619433645No Hit
CATAGATGTGGCTATGCAGACTGAGTAGAGTTGGGTGTGTCTATGAGACC47351.0904711019400481No Hit
CATAGAACTTTGTGCCCCCAGTGTCTTCTTATAGCCAGTGTCTCCCCTCT39110.900703797188496No Hit
CATAGATCATGCAAAGAACACAGGCAGATCATGAGGTCAGGTCTATGAGA36490.8403651638815705No Hit
CATAGACTCAAGCAATCCTCCCACCTCAGCCTCCCAAATAGCCAGGACTA33040.7609116200232142No Hit
CATAGACTCAAGCAATCCTCCCACCTCAGCCTCCCAAGTAGCCAGGACTA32670.7523905153195645No Hit
CATAGAACTTTGTGCCCCCAGTGTCTCCCCTCTATGAGACCAAGTCTCTG30990.7137000939624519No Hit
CATAGAGGGCTGTTTTGAGTGTTTGCCGTGGAGGAAAGCAATCACCGCCA30420.7005729867162888No Hit
CATAGAGGGCTGTTTTGAGTGTTTGCCGTGGAGGGAAGGAAGGGCAAACT30060.6922821821397646No Hit
CATAGATGTGGCTATGCAGACGGAGTGAGGGCAGTAAGTCTATGAGACCA29600.6816883762919836No Hit
CATAGAAGATCCCATAGCAGCTTTGCTACCGTAAGTTTTTCCAAATATAA27530.6340162499769699No Hit
CATAGAACTTTGTGCCCCCAGTGTCTCCCCTCTATGAGACCAAGTTCTTA25990.5985500303996169No Hit
CATAGAAGATCCCATAGCAGCTTTGCCGTGGAGGAAAGGAGGTCTATGAG24740.569762514508908No Hit
CATAGAACTTTGTGCCCCCAGTGTCTCCCTTCTTATAGCCAGTGTCTCCC24110.5552536064999908No Hit
CATAGAACTTTGTGCCCCCAGTGTCTCCCCTCTTCTTATAGCCAGTGTCT23820.5485749028133463No Hit
CATAGAAGATCCCATAGCAGCTTTGCTACCGTAGTTTTTCCAAATATAAG23700.5458113012878383No Hit
CATAGAACACAGATCTGCTTGGAGGGAAGGAAGGGCAAACTCTATGAGAC23300.5365992962028115No Hit
CATAGAAGGAGGGGAAACTGAGGCCAAGTCTCTGGAGGGAAGGAAGGGCA22860.5264660906092821No Hit
CATAGAAGGAGGGGAAACTGAGGCCAAGGGAGGGAAGGAAGGGCAAACTC22340.5144904839987472No Hit
CATAGAGGGCTGTTTTGAGTGTTTGCCATGTCTTCTGTGTTTGGTCTATG22080.5085026806934797No Hit
CATAGACCCTTCTCCATGCCACATCAAGAATGAGGAGAGTACTACTTTCT21220.48869686976067206No Hit
CATAGATCAACAATGGATGAGCAAAAGGAAAGCAATCACCGCCAGTCTAT20060.46198205501409434No Hit
CATAGACCCTTCTCCATGCCACACTCATGCAAAGCTGGTCTATGAGACCA19750.4548427510731986No Hit
CATAGATCATGGGACTTCAGCATGGCTAGTCCGTCACCCCTAATCTATGA19300.44447924535254346No Hit
CATAGAGGGGCATGCTGGATAAATCTTAGGTAGAGGAGTTTCAAACATCT19160.44125504357278406No Hit
CATAGAACTTTGTGCCCCCAGTGTCTCCCCTTCTTATAGCCAGTGTCTCC19140.44079444331853274No Hit
CATAGAGCTTCTGATCACTTTCGCCCTCTCTCCAGAACCCACCATCTATG18470.4253643348011128No Hit
CATAGAAGGAGGGGAAACTGAGGCCAGGAGGGAAGGAAGGGCAAACTCTA17400.40072222119866613No Hit
CATAGATGTGGCTATGCAGACTGAGTGAGGGCAGTAAGTCTATGAGACCA17280.3979586196731581No Hit
CATAGATCATGCAAAGAACACAGGCCTACGGGGGCAGATTAACAGGTCAT17020.39197081636789066No Hit
CATAGAGAGGTCGCCCAGGTATTTCTTAGGTAGAGGAGTTTCAAACATCT15410.35489249590065775No Hit
CATAGAGGGCTGTTTTGAGTGTTTGCAGATTTGGACCTGCGAGCGGGTTC15310.35258949462940103No Hit
CATAGAAGAATTGCTTGAATCCGGGAGGGAAGGAAGGGCAAACTCTATGA14950.3442986900528769No Hit
CATAGATGTTAGGTGCTCATTTTAAAACATCAGGAAAGCAATCACCGCCA14190.32679588039132595No Hit
CATAGAGTCTCGCTAATAGTTTTACCTCAAAACCACTTGAACATTGCCTT13980.3219595777216869No Hit
CATAGAACTTTGTGCCCCCAGTGTCTCCCCTCTATTCTTATAGCCAGTGT13640.31412937339941416No Hit
CATAGAAGGAGGGGAAACTGAGGCCAAGTAGCATGTTGAGATGAATAATT13320.30675976933139265No Hit
CATAGATCAACAATGGATGAGCAAAAGGGAGGGAAGGAAGGGCAAACTCT11800.27175415000829084No Hit
CATAGAAGGAGGGGAAACTGAGGCCAAGTCTCTGGGAGGGAAGGAAGGGC11570.2664572470844004No Hit
CATAGAAGGAGGGGAAACTGAGGCCAAGTCTCTGCGGAGGGAAGGAAGGG11400.262542144923264No Hit
CATAGAACTTTGTGCCCCCAGTGTCTCCCCTCTATGAGACCAAGTCTTCT11320.26069974390625866No Hit
CATAGATCATGCAAAGAACACAGGCCTTTCAGCATCTCTTTGGCTCTATG11000.25333013983823716No Hit
CATAGAGGGCTGTTTTGAGTGTTTGCTACCGTAGACGGAGTGAGGGCAGT10970.2526392394568602No Hit
CATAGAGGAAGTGCCTACCTTAAATTGATGGAGACAGCCGCTCACCTCTA10590.2438878346260847No Hit
CATAGAAGGAGGGGAAACTGAGGCCAAGTCTCTGCTACCGTAGGAGGGAA10560.24319693424470773No Hit
CATAGAAGGAGGGGAAACTGAGACCAAGTCTCTGCTACCGTAGTATAACG10500.24181513348195371No Hit
CATAGAACTTGTAATCATTCCCTACTTCCCATGGGTCCTTTTCACATCAT10460.24089393297345102No Hit
CATAGAAGGAGGGGAAACTGAGGCCAAGTCTCGGAGGGAAGGAAGGGCAA10400.23951213221069695No Hit
CATAGACACCTGGATCCTGTGTTGTCTGCCATGTCTTCTGTGTTTGGTCT9990.2300698269985445No Hit
CATAGACACCTGGATCCTGTGTTGTCTTAGGTAGAGGAGTTTCAAACATC9860.2270759253459108No Hit
CATAGAACTTTGTGCCCCCAGTGTCTGGTTCTACACATAGAGTCTCGCTA9490.21855482064226098No Hit
CATAGAAGATCCCATAGCAGCTTTGCTGGTAGTTTTTCCAAATATAAGAT9250.21302761759124492No Hit
CATAGATCAACAATGGATGAGCAAAAGGACACTGACGACATGGTTCTACA8720.2008217108535844No Hit
CATAGAACTTTGTGCCCCCAGTGTCTCTTCTTATAGCCAGTGTCTCCCCT8460.19483390754831698No Hit
CATAGACCCTTCTCCATGCCACATCAACACTGAGCAGAGTTGGGTGTGTC8300.19114910551430625No Hit
CATAGATCACCCAGGTAATCACTAGGTACGGTAGCATGTTGAGATGAATA8000.18424010170053615No Hit
CATAGAACTTTGTGCCCCCAGTGTCTCCTTCTTATAGCCAGTGTCTCCCC7280.16765849254748788No Hit
CATAGAAGATGGTCTGCTACACTGGTAATAGTTTTTCCAAATATAAGATC7250.16696759216611087No Hit
CATAGAAGATCCCATAGCAGCTTTGCCGTGGAGGGAAGGAAGGGCAAACT7190.16558579140335686No Hit
CATAGATGTGGCTATGCAGACTGAGTACACTGAGCAGAGTTGGGTGTGTC7170.1651251911491055No Hit
CATAGATCATGGGACTTCAGCATGGCATGTTGAGATGAATAATTGAGACT7100.1635130902592258No Hit
CATAGATGTGGCTATGCAGACTGAGTACACTGACGGAGTGAGGGCAGTAA7070.1628221898778488No Hit
CATAGAAGGAGGGGAAACTGAGGCCAAGTCTCTGCTAGCTCTCTCCAGAA6950.16005858835234077No Hit
CATAGATGTGGCTATGCAGACTGAGTTTTTCCAAATATAAGATCCCATCA6930.15959798809808942No Hit
CATAGAGCTTCTGATCACTTTCGCCCCATGGGTCCTTTTCACATCATCTA6800.1566040864454557No Hit
CATAGAGCTTCTGATCACTTTCGCCCACACTCATGCAAAGCTGGTCTATG6520.15015568288593698No Hit
CATAGATCACCCAGGTAATCACTAGGTCACATTCACCAAGTCACCCAGCC6350.14624058072480056No Hit
CATAGATGTGCCTCTCCAACATTCACCAAGTCACCCAGCCTCTATGAGAC6330.14577998047054921No Hit
CATAGATGTGCCTCTCCAACATTCATGGGTCCTTTTCACATCATCTATGA6310.1453193802162979No Hit
CATAGATGTGCCTCTCCAACATTCATACCTGAGCATGTGACCAAACAGAA6260.14416787958066954No Hit
CATAGATGTGGCTATGCAGACTGAGTGGGGGCAGATTAACAGGTCATCTA5940.1367982755126481No Hit
CATAGAAGATCCCATAGCAGCTTTGCCGTGGAGGAAAGCAATCACCGCCA5810.13380437386001437No Hit
CATAGAAGGAGGGGAAACTGAGGCCACACTCATGCAAAGCTGGTCTATGA5810.13380437386001437No Hit
CATAGACCCTTCTCCATGCCACATCATGCAAAGCTGGTCTATGAGACCAA5760.13265287322438601No Hit
CATAGAACCAGAGTAATGAGGGATGCTCAGGTCTCCAATGGTGTCTATAA5760.13265287322438601No Hit
CATAGACCCTTCTCCATGCCACATCATCTATGAGACCAAGTCTCTGCTAC5630.12965897157175232No Hit
CATAGATGTGGCTATGCAGACTGAGTCTACTGAGCAGAGTTGGGTGTGTC5570.1282771708089983No Hit
CATAGATCACCCAGGTAATCACTAGGTTCTACACATAGATTAAGTGCAGC5450.12551356928349025No Hit
CATAGATTAAGTGCAGCTATATTGGAGGAAAAGTCTATGAGACCAAGTCT5350.12321056801223354No Hit
CATAGATCATGCAAAGAACACAGGCCCCACCCTTATGATCGTATCTATGA5330.1227499677579822No Hit
CATAGAAGGAGGGGAAACTGAGGCCAAGGAGGGAAGGAAGGGCAAACTCT5280.12159846712235386No Hit
CATAGAGGGCTGTTTTGAGTGTTTGCCGTGGAGGAAAGGAGGTCTATGCG5080.11699246457984044No Hit
CATAGAGCTTCTGATCACTTTCGCCCTAGTTTTTCCAAATATAAGATCCC5070.11676216445271478No Hit
CATAGAGGGCTGTTTTGAGTGTTTGCTACGACGGAGTGAGGGCAGTAAGT4850.11169556165595003No Hit
CATAGATGTGGCTATGCAGACTGAGTACTGAGCAGAGTTGGGTGTGTCTA4660.10731985924056231No Hit
CATAGATGTGGCTATGCAGACTGAGTCTCTGCTACCGTAGGAGGGAAGGA4640.10685925898631096No Hit
CATAGAAGGAGGGGAAACTGAGGCCAAGGGCTAGTCCGTCACCCCTAATC4490.10340475707942591No Hit

[FAIL]Adapter Content

Adapter graph

Produced by FastQC (version 0.12.1)