FastQCFastQC Report
Wed 28 Jun 2023
EGAF00005804541

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005804541
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences96015
Sequences flagged as poor quality0
Sequence length150
%GC48

[WARN]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
CATAGAGGTGAGCGGCTGTCTCCACAAGTCCGCGCAGAGCCTTCAGGTCA3924540.87382179867729No Hit
CATAGATTGCACATAAAGTCTGATCCCATCTCAAGTCTCACTCTTCTATG43674.548247669634953No Hit
CATAGACTACCACTACCCAGCACAGGAGCACCCTCTATGTGTAGAACCAT19632.0444722178826225No Hit
CATAGACCATCCTCCCACCTTGACCTCCCAAAGTGCTGTGATTACAGGTG19362.0163516117273343No Hit
CATAGAAGCAGCATTGATCATCCTCCACCCCATCCTACATGTGTCTATGT18141.8892881320626986No Hit
CATAGACTACCACTACCCAGCACAGCTACTTCTCTATGCACTTTGCCACA17001.7705566838514815No Hit
CATAGAGCCTGGCATTTGAGGTAAGGCTTGTGAGGGCTGAAGTCTATGTG15031.565380409311045No Hit
CATAGACCATCCTCCCACCTTGACCTCCTGAGTAGCTGAGACCACAGGCA14891.5507993542675624No Hit
CATAGACTACCACTACCCAGTACAGGAGCACCCTCTATGTGTAGAACCAT10031.044628443472374No Hit
CATAGAGAATACAATGAACTGTGATGGCAGTGTAAGGCTTGTGAGGGCTG9550.9946362547518618No Hit
CATAGAGATGTCAAGAGCAATGCCCAGCCACCCCATCCTACATGTGTCTA9410.9800551997083788No Hit
CATAGACTCAAGAAACTTACAATCATGGCAGAAAGTGAAGGAGAGGCCAC8830.919647971671093No Hit
CATAGACTACCACCACCCAGTACAGGAGCACCCTCTATGTGTAGAACCAT7070.7363432796958809No Hit
CATAGACCATCCTCCCACCTTGACCTCCCAAAGTGCTGGGATTACAGGTG6790.7071811696089152No Hit
CATAGACCATCCTCCCACCTTGACCTCTTAAGTAGCTGGGACTACAGGTG6390.6655210123418216No Hit
CATAGAGGTAGGCATTTCATCTATATTGCAACTCGCTGACTTCTCTTAAA6070.6321928865281466No Hit
CATAGACTCAAGAAACTTACAATCATGGCAGAAGGTGTAAGGGAAGCCAC4990.5197104619069937No Hit
CATAGACCATCCTCCCACCTTGACCTCCCAGAGTGCTGGAATTATAGGCG4470.4655522574597719No Hit
CATAGACCATCCTCCCACCTTGACCTATGTAGGATGGGTTTTTGCCAGAT4270.4447221788262251No Hit
CATAGAGATGTCAAGAGCAATGCCCATGCTGAAGTCCCATGATCTATGTG3930.4093110451491955No Hit
CATAGACCATCCTCCCACCTTGACCTCCTGAGTAGCTGGAACTACAGGAG3520.3666093839504244No Hit
CATAGACCATCCTCCCACCTTGACCTCCATCTTGACCTCCCAAAGTGCTG3460.36036036036036034No Hit
CATAGAGATGTCAAGAGCAATGCCCACCCCATCCTACATGTGTCTATGTG3150.32807373847836274No Hit
CATAGAAGGTGATAATCATGACAGCCACCCCATCCTACATGTGTCTATGT2930.30516065198146125No Hit
CATAGAAGCAGCATTGATCATCCTCCATGTTGTCAGTGTAGCATTTTAAC2880.2999531323230745No Hit
CATAGACCATCCTCCCACCTTGACCTCCCAAAGTGCTGGGATTACAGGCG2810.2926626048013331No Hit
CATAGAAGCAGCATTGATCATCCTCCATACGGTAGCATTTTAACACAGCA2770.2884965890746237No Hit
CATAGAAGCAGCATTGATCATCCTCCAATAGAGCATTTTAACACAGCATT2760.28745508514294643No Hit
CATAGAGGTGAGCGGCTGTCTCCACAAGTCCGCGCAGAGCCTTCGGGTCA2670.2780815497578503No Hit
CATAGAGGTGAGCGGCTGTCTCCAAGTCCGCGCAGAGCCTTCAGGTCAGA2500.2603759829193355No Hit
CATAGACTCAAGAAACTTACAATCATGGCAGAAGGTGAAGGGGAAGCAGG2360.24579492787585272No Hit
CATAGACCATCCTCCCACCTTGACCTCCCAAAGTGCTATTACTACAGGTG2350.2447534239441754No Hit
CATAGACCATCCTCCCACCTTGACCTCCCAACAGGTACTGGGATTACAGG2330.2426704160808207No Hit
CATAGACCATCCTCCCACCTTGACCTCCCAAAGTGCTGGGATTACAGGCA2290.23850440035411133No Hit
CATAGAAGCAGCATTGATCATCCTCCAGCATTGATCATCCTCCAGCAGCA2220.23121387283236997No Hit
CATAGACCATCCTCCCACCTTGACCTTCCAAAGTGCTAGGATAATAGGTG2120.2207988335155965No Hit
CATAGAGATGTCAAGAGCAATGCCCGGCCACATTATTTTCTATGTGTAGA2090.2176743217205645No Hit
CATAGACCATCCTCCCACCTTGACCTCCCAAAGTGCTGGGATTACAGGAG2010.20934229026714576No Hit
CATAGACCATCCTCCCACCTTGACCTCTCAAAGTGCTAGGGTTACAGGCA1860.19371973129198564No Hit
CATAGAATTCTGTCCTATCTTGCTACTGGTATAAAATACGCACATAGACC1840.19163672342863095No Hit
CATAGACTCAAGAAACTTACAATCATGGCAGAAGGGGAAACAAACACATA1820.18955371556527628No Hit
CATAGAGATGTCAAGAGCAATGCCCAGCCACATTATTTTCTATGTGTAGA1800.1874707077019216No Hit
CATAGACCATCCTCCCACCTTGACCTCCTGAGTAGCTGGGACTGTGCATG1770.18434619590688955No Hit
CATAGAGGTGAGCGGCTGTCTCCACAAGTCCGCGCAGAGCCTTCAGGTCG1760.1833046919752122No Hit
CATAGAGGTGAGCGGCTGTCTCCACAAGTCCGCGCGGAGCCTTCAGGTCA1750.18226318804353486No Hit
CATAGAAGGTGATAATCATGACAGCCAACTGATCTTCAACAAAGCAAACA1730.18018018018018017No Hit
CATAGACCATCCTCCCACCTTGACCTCTCAAAGTGTTGAGATTACAGATG1700.17705566838514813No Hit
CATAGAGTTTTGTTCCCTTGCTGGCAAGAACATAGCTAATTCAGTGATGC1660.17288965265843878No Hit
CATAGAGGTGAGCGGCTGTCTCCACAGGTCCGCGCAGAGCCTTCAGGTCA1620.16872363693172943No Hit
CATAGACCATCCTCCCACCTTGACCTCCCAAAGTGCTAGGATTACAAGTG1590.1655991251366974No Hit
CATAGAGGTGAGCGGCTGTCTCCACGAGTCCGCGCAGAGCCTTCAGGTCA1510.15726709368327865No Hit
CATAGAGGTGAGCGGCTGTCTCCACACGTCCGCGCAGAGCCTTCAGGTCA1490.15518408581992396No Hit
CATAGAGGTGAGCGGCTGTCTCCACAAGTCCGCGCAGAGCCTTCAGGCCA1460.15205957402489195No Hit
CATAGAGGTGAGCGGCTGTCTCCACAAGTCCGCGCAGAGCCCTCAGGTCA1450.1510180700932146No Hit
CATAGAGGTGAGCGGCTGTCTCCACAAGTCCGCGCAGAGCCTCCAGGTCA1420.14789355829818257No Hit
CATAGATCCCAGGCTTTAGAAAATATACCACCCAGTACAGGAGCACCCTC1360.14164453470811852No Hit
CATAGAAGGTGATAATCATGACAGCCAATGGGCTGCATGGGTAATAGATG1350.14060303077644118No Hit
CATAGACCATCCTCCCACCTTGACCTCCCAAAGTGTTAGGATTACAGGCA1300.13539551111805448No Hit
CATAGACCATCCTCCCACCTTGACCTCTCGAGTAGCTGGGACTGCAGGCC1300.13539551111805448No Hit
CATAGACCATCCTCCCACCTTGACCTTCCCGGTAGCTGGGACTACAGGCA1280.1333125032546998No Hit
CATAGACCATCCTCCCACCTTGACCTCCTGAGTAGCTGAGACCACAGGTG1260.1312294953913451No Hit
CATAGACTCAAGAAACTTACAATCATGGCAGAAGGCAAAAAAGAAGCAGG1250.13018799145966775No Hit
CATAGACCATCCTCCCACCTTGACCTCCCAAAGTGCTGGTATTACAGGTG1250.13018799145966775No Hit
CATAGACCATCCTCCCACCTTGACCTCCCAAAGTGCTGAGATTACACACG1220.12706347966463571No Hit
CATAGAGCCTGGCATTTGAGGTAAGGCACTTGGTCCAGACTTTCTATGTG1220.12706347966463571No Hit
CATAGAGGTGAGCGGCTGTCTCCATGCTGAAGTCCCATGATCTATGTGTA1190.1239389678696037No Hit
CATAGAGATGTCAAGAGCAATGCCCATGCCTAGCCATTTTTGGTTCTATG1180.12289746393792636No Hit
CATAGAGGTGAGCGGCTGTCTCCACAAGTCCGCGCAGGGCCTTCAGGTCA1150.11977295214289435No Hit
CATAGAGGTGAGCGGCTGTCTCCATGGTCAGGTCCCGCTGGAGGAGGAGG1130.11768994427953966No Hit
CATAGACCATCCTCCCACCTTGACCTCCCAAAGGGCTGGGATGACACGCA1110.11560693641618498No Hit
CATAGAGGTGAGCGGCTGTCTCCACAAGCCCGCGCAGAGCCTTCAGGTCA1110.11560693641618498No Hit
CATAGACCATCCTCCCACCTTGACCTCCCAAGTAGCTGGGTTTACACGTG1080.11248242462115295No Hit
CATAGACCATCCTCCCACCTTGACCTCCCAAGTGTTGGGATTATAGGCGT1040.10831640889444358No Hit
CATAGACCATCCTCCCACCTTGACCTCCCAAAGTGCTGGGATGACAGGCA1030.10727490496276625No Hit
CATAGACCATCCTCCCACCTTGACCTGCGTCATGAGCCACCATGCCCGGC1000.10415039316773421No Hit
CATAGAGATCAATCCCTGTCTACATAACCATGTCGTCAGTGTAGCATTTT990.10310888923605685No Hit
CATAGACCATCCTCCCACCTTGACCTCCCAAAGTGATGAGATTACGGGTG990.10310888923605685No Hit
CATAGAGGTGAGCGGCTGTCTCCACAAGTCCGCGCAGCGCCTTCAGGTCA980.10206738530437953No Hit
CATAGATCCCAGGCTTTAGAAAATATACCACCACCCAGTACAGGAGCACC970.10102588137270217No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)