FastQCFastQC Report
Wed 28 Jun 2023
EGAF00005804542

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005804542
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences93686
Sequences flagged as poor quality0
Sequence length150
%GC39

[FAIL]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
CATAGACGCGGTATTGTCAGGAGCTAACTGGGATACTGCTCTATGAGACC76138.12608073778366No Hit
CATAGAACTGAGGCTGGTAGAGGGAGGCGTGGTATGAGGGGAATCTATGA70127.484576137309737No Hit
CATAGACCTGGTACTTCTCTTCTGGGTCCATTTTTGGTTCTCTTCTATGA66037.0480114424780655No Hit
CATAGATTACTGGGAGACTGGCGCTCACCTCTATGAGACCAAGTCTCTGC47845.106419315586106No Hit
CATAGAGGGAAGAGAAGAGGAGCTGACATCCCAACCACACGTCTATGAGA30093.2117925837371644No Hit
CATAGAAGCTGTCGTTTGTCAACTCCTGGGCCCATAATACACTTTTCTAT28383.0292679802745344No Hit
CATAGAGGATCTCAGGAGTTTAGGTGGGAGGAACAGGGAGATGTTCTATG24842.6514100292466325No Hit
CATAGAAAAGTCACCATGCAGCCCTGTGATTGTCCTTGCACACCATGGAT23182.4742224024934356No Hit
CATAGACAGTCCTGCCGTGTACATGTACAGCCTACATCCCTCATCTATGA17621.8807505924044148No Hit
CATAGATTACTGGAGACAGCCGCTCACCTCTATGAGACCAAGTCTCTGCT16801.7932241743697028No Hit
CATAGACGCGGTATTGTCAGGAGCTGACTGGGATACTGCTCTATGAGACC14201.515701385479154No Hit
CATAGAAGCTGTCGTTTGTCAACTCCTCCTGGGCCCATAATACACTTTTC12891.3758725956919924No Hit
CATAGAAAAGTCACCATGCAGCCCTGCCGTGTACAGCCTACATCCCTCAT12641.3491877121448241No Hit
CATAGAATTGCCTACTTTGGGACCCAGCATGAGAAGAATGGCCTCTATGA12381.3214354332557692No Hit
CATAGAAAAGTCACCATGCAGCCCTGGGCCCATAATACACTTTTCTATGA11981.2787396195803002No Hit
CATAGAAAAGTCACCATGCAGCCCTGGCAAAAGGGTAAGAGTTCTATGAG10411.111158550904084No Hit
CATAGAAAAGTCACCATGCAGCCCTGCCCTTGTCCTTGCACACCATGGAT10211.0898106440663493No Hit
CATAGATGTCCCCATTCATCCTGCAAACAGAATGGGACCCATCTATGAGA10141.082338876673142No Hit
CATAGAACTTGTGCTTTTGGTGTCACCCGTAATCCCTCCCTTTTCTATGA9371.0001494353478642No Hit
CATAGATCATGGGACTTCAGCATGGCGGTGTTTGCAGATTTGGACCTGCG9030.9638579937237154No Hit
CATAGATCATGAATGACTCCCACTCTGTAGATTATGCTCTCTTCCGCCTT8210.8763315756890038No Hit
CATAGATTACTGGGAGACAGCCGCTCACCTCTATGAGACCAAGTCTCTGC8130.8677924129539099No Hit
CATAGAATTGCCTACTTTGGGACCCATCTATGAGACCAAGTCTCTGCTAC8010.8549836688512691No Hit
CATAGAATTGCCTACTTTGGGACCCATCTATGCAAACAGAATGGGACCCA7400.7898725529961786No Hit
CATAGAAGCTGTCGTTTGTCAACTCCTATAGATTATGCTCTCTTCCGCCT6980.7450419486369362No Hit
CATAGACGCGGTATTGTCAGGAGCTGACATCCCAACCACACGTCTATGAG6580.702346134961467No Hit
CATAGATTACTGGGAGACTGGCGCTCTCTTCCGCCTTTATCCTTCTATGA6320.6745938560724121No Hit
CATAGACAGTATGGGGGAAACGGCTCTCTTCCGCCTTTATCCTTCTATGA5850.6244262750037359No Hit
CATAGACGTCTTTTGTGGGTTTTCTTTCTTGAGGTTCTTCAACACAGCTA5850.6244262750037359No Hit
CATAGAAAAGGGCGGTGGGAAAGTTCTATGAGGATGACTTATGGAATCTG5690.6073479495335482No Hit
CATAGATGCACCAGAAGCCACCTACCGTACCCCTTTACCTACCTTCTCAG5630.6009435774822279No Hit
CATAGAATTGCCTACTTTGGGACCCATGCAAACAGAATGGGACCCATCTA5400.5763934846188331No Hit
CATAGAGCACCCAACTATCCTTCAGCATGAGAAGAATGGCCTCTATGAGA5290.564652135858079No Hit
CATAGATCCAGGGAGCTTTCAAGTGTCGAACAAGGGCATGGTCAAGTGTC5250.5603825544905322No Hit
CATAGATGCACCAGAAGCCACCTACCAAGTATATGACACATTACACCAGT5010.5347650662852507No Hit
CATAGATGCACCAGAAGCCACCTACCGTAAGGATGACTTATGGAATCTGA4830.5155519501312896No Hit
CATAGAGGCAAGCTAACTCTGAGATCCACAGCCCAGTTTTCCTTCTCTAT4760.5080801827380825No Hit
CATAGATCCAGGGAGCTTTCAAGTGTCTATGAGAACAAGGGCATGGTCAA4720.5038106013705356No Hit
CATAGATGTCCCCATTCATCCTGCAACCGTAGTGTACAGCCTACATCCCT4700.5016758106867623No Hit
CATAGATGTCCCCATTCATCCTGCAACCGTAACAAGCACATTATTATTGG4550.4856648805584613No Hit
CATAGAATCCCTGCCCTTGACCTTGGTGAAAAGTAGGGGACAGTTCTATG4480.4781931131652542No Hit
CATAGATGCACCAGAAGCCACCTACCGTACCAAGTATATGACACATTACA4310.46004739235317976No Hit
CATAGAATTGCCTACTTTGGGACCCATCTATGAGACCAAGTGCAAACAGA3930.4194863693614841No Hit
CATAGATGTCCCCATTCATCCTGCAACCGTACTCCAGTCTCGGCAACAAG3830.4088124159426168No Hit
CATAGAATTGCCTACTTTGGGACCCACTTTGTTCCCTGGCTTCTCTATGA3780.4034754392331832No Hit
CATAGACAGAACACCACACCCCTGTCCTTGTCCTTGCACACCATGGATCT3560.37999274171167513No Hit
CATAGAATTGCCTACTTTGGGACCCAGTCTCTGCCATCGGCCGCACTGAA3440.3671839976090345No Hit
CATAGAACCCTGCTTCCTAAATCAACACAGCTTGAGGTTCTTCAACACAG3430.3661166022671477No Hit
CATAGAACTTGTGCTTTTGGTGTCACAAGCACATTATTATTGGTTGGTTC3430.3661166022671477No Hit
CATAGATGCACCAGAAGCCACCTACCGTACCAGCATGAGAAGAATGGCCT3320.3543752535063937No Hit
CATAGAGGGAAGAGAAGAGGAGCTGCCTGGGCCCATAATACACTTTTCTA3270.34903827679696003No Hit
CATAGACTTTCTGAAATTGTTTGCTGCTTTTGCCAAGATTGTAGGAGTAG3200.34156650940375294No Hit
CATAGAATTGCCTACTTTGGGACCCATCTATGAGACCAAGTCTGCAAACA3120.33302734666865913No Hit
CATAGAGGTTCTTTGTAGACTTACTTGGCAAAAGGGCAAGTGTATGGTCA3050.32555557927545203No Hit
CATAGATCCAGGGAGCTTTCAAGTGTCTATGAACAAGGGCATGGTCAAGT2930.3127468351728113No Hit
CATAGAGAAAGGCAGGCGAAGTTAGCTGTCCCAAGTATATGACACATTAC2850.3042076724377175No Hit
CATAGATCATGGGACTTCAGCATGGCAAAAGGGCAAGTGTATGGTCAGTT2690.28712934696752984No Hit
CATAGAGTCATTCCAAACTGTGCACTTGTCCTTGCACACCATGGATCTAT2670.28499455628375636No Hit
CATAGAATTGCCTACTTTGGGACCCATCTATGAGACCAAGTCTCTGCAAA2660.28392716094186965No Hit
CATAGAATTCCCCAATGTCCTGTGCACACCATGGATCTATGAGACCAAGT2600.2775227888905493No Hit
CATAGAATTGCCTACTTTGGGACCCATCTGCAAACAGAATGGGACCCATC2540.2711184168392289No Hit
CATAGATTGCCTCATTGTGCCAGACATCGGCCGCACTGAAATTGTCTATG2430.2593770680784749No Hit
CATAGATCATGGGACTTCAGCATGGCTCTCTTCCGCCTTTATCCTTCTAT2360.2519053006852678No Hit
CATAGATGTCCCCATTCATCCTGCAACCGTGAACAAGGGCATGGTCAAGT2330.24870311465960762No Hit
CATAGAGGATCTCAGGAGTTTAGGTGGGAGAAGGAAAATGTCAGTGGGCC2320.24763571931772088No Hit
CATAGAGGCAAGCTAACTCTGAGATCCATCAGAGCATCACCCCTTCTATG2260.24123134726640053No Hit
CATAGAAAAGGGCGGTGGGAAAGTTCCATGGTTCTACACATAGAACAAGG2250.24016395192451379No Hit
CATAGATGTGTGAGAGAGGGAGAGACAGCCTTCTCTGATACCATCCCTCT2190.23375957987319343No Hit
CATAGAAGCTGTCGTTTGTCAACTCCTGGTGGTGCTGGAACTAGTTCTAT2160.23055739384753327No Hit
CATAGAAGCTGTCGTTTGTCAACTCCTGGCAAAAGGGTAAGAGTTCTATG2100.22415302179621285No Hit
CATAGAATCCCTGCCCTTGTCCTTGCACACCATGGATCTATGAGACCAAG2050.21881604508677927No Hit
CATAGATGGCATGTCACTTCCTCAGAGCATCACCCCTTCATTTTGCTGGA1970.21027688235168543No Hit
CATAGATTTGGCACTCACATACACGCTGACATCCCAACCACACGTCTATG1960.2092094870097987No Hit
CATAGATGTCCCCATTCATCCTGCAACTGTCCCCCTTCATTTTGCTGGAA1940.20707469632602524No Hit
CATAGAATCCCTGCCCTTGACCTTGGGGGAAGAGAAACAGAATCTATGAG1860.1985355335909314No Hit
CATAGAGGGAAGAGAAGAGGAGCTGCTCTCTTCCGCCTTTATCCTTCTAT1850.19746813824904466No Hit
CATAGAACTGAGGCTGGTAGAGGGAGCCTTGGAGGCCTAGCCTGGCAGCT1740.1857267894882907No Hit
CATAGATTTGGCACTCACATACACGCATGGTTCCAACTCTATAGATTATG1710.1825246034626305No Hit
CATAGAGACCCCCAAGTAGCCTAACTGGGAGGAACAGGGAGATGTTCTAT1660.17718762675319685No Hit
CATAGACCCACTTACACACACAGGTTTTCCGGCTTGAGGTTCTTCAACAC1660.17718762675319685No Hit
CATAGACCATGTAATACCATCGTGAGCAGCACCCCTTCATTTTGCTGGAA1650.1761202314113101No Hit
CATAGAATTGCCTACTTTGGGACCCATCTATGAGACCAAGTCTCTGCTGC1600.17078325470187647No Hit
CATAGACAGAACACCACACCCCTGTCCTTGCACACCATGGATCTATGAGA1550.16544627799244285No Hit
CATAGATCATGAATGACTCCCACTCTGCTATATCTCAACTCCCAGCTCCT1540.1643788826505561No Hit
CATAGACAGTCCTGCCGTGTACATGTGCCCTGTGATTGTCCTGGTCTATG1520.16224409196678266No Hit
CATAGAACTTGTGCTTTTGGTGTCACTTGATCATCCATTGTCTGCTCTAT1510.16117669662489592No Hit
CATAGACCCCCATGCAACCACATCTACACTGACGACATGGTTCTACACAT1500.1601093012830092No Hit
CATAGAGGATCTCAGGAGTTTAGGTGGGTCCATTTTTGGTTCTCTTCTAT1460.1558397199154623No Hit
CATAGAATTCCCCAATGTCCTGTGCACACCATGGATCTATTGTCCTTGCA1450.15477232457357554No Hit
CATAGATCCAGGGAGCTTTCAAGTGTCTATGAGACCAAGTCTCTGCTACC1440.15370492923168882No Hit
CATAGACAGAACACCACACCCCTGTCTATGAGACCAAGTCCTTAGGAGTT1290.13769399910338792No Hit
CATAGAATTGCCTACTTTGGGACCCATCTATGAGACTGCAAACAGAATGG1250.133424417735841No Hit
CATAGATGTCCCCATTCATCCTGCAACCGTATGGGTCCATTTTTGGTTCT1220.13022223171018082No Hit
CATAGACAGTCCTGCCGTGTACATGTGTACAGCCTACATCCCTCATCTAT1220.13022223171018082No Hit
CATAGAGGTTCTTTGTAGACTTACTTGGCAAAAGGGTAAGAGTTCTATGA1220.13022223171018082No Hit
CATAGACCATGTAATACCATCGTGAGCAGACATCGCCTGGTGGTGCTGGA1130.12061567363320026No Hit
CATAGATCATGAATGACTCCCACTCTGTTCCCTGGCAAAAGGGTAAGAGT1100.11741348760754008No Hit
CATAGAATTCCCCAATGTCCTGTGCACCCCGGGCCAAGCCTCTCCTCCCC1010.10780692953055954No Hit
CATAGAGGGAAGAGAAGAGGAGCTGGTGGTGCTGGAACTAGTTCTATGAG1010.10780692953055954No Hit
CATAGAGGCAAGCTAACTCTGAGATCCAGGGCAAGTGTATGGTCAGTTCT980.10460474350489934No Hit
CATAGATCTGCTCACCTAAATTTCGTTCAGTGTACAATGGGCACACTTAA970.10353734816301262No Hit
CATAGAACTGAGGCTGGTAGAGGGAGGATGACTTATGGAATCTGAAGCTC970.10353734816301262No Hit
CATAGAATTGCCTACTTTGGGACCCAGTCTACAAGCACATTATTATTGGT960.10246995282112588No Hit
CATAGAAAAGTCACCATGCAGCCCTGCCCCTTTACCTACCTTCTCAGCTC940.10033516213735243No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)