FastQCFastQC Report
Wed 28 Jun 2023
EGAF00005804547

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005804547
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences98248
Sequences flagged as poor quality0
Sequence length150
%GC40

[FAIL]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
CATAGAGGTGAGCGGCTGTCTCCACAAGTCCGCGCAGAGCCTTCAGGTCA2018920.549018809543195No Hit
CATAGATCTCACAGAAACTTCCTTGATGTTCGCACCCAAGCTCTATGTGT1033410.518280270336291No Hit
CATAGAGGGGCCTGGTTATTACTTGGAGGCTGGAGAAAAAGCTCTATGTG57055.806733979317645No Hit
CATAGATTCTTTCCTGGCTGTGGGTGGGTTGAGGGAGTCTTCTCTATGTG50175.10646527155769No Hit
CATAGAAGTATTCACACTGGGGCCCAGAACCCATTGTAGATTTCTTTCAC37143.7802296229948698No Hit
CATAGAAGGAACAGCAGAGAGGGCAGGCCCTTCAGCATCATTTCTATGTG34773.5390033384903505No Hit
CATAGAATCTGGTTCAAGCACACAGTTGTGGAAAGTGCAATGAGTCTATG23792.4214233368618188No Hit
CATAGAGCTCATTCAACTAATAACTGGTAGACCATGGAGAGAATAATCCG23322.3735852129305433No Hit
CATAGATGGGACAGCGACAATGACAGTTGTGGAAAGTGCAATGAGTCTAT21712.2097141926553214No Hit
CATAGATCTAGCCCATCACTTCAGCATCATTTCTATGTGTAGAACCATGT19571.991898053904405No Hit
CATAGAAATTTTTCAGAGACAGTTGGGACAGTTGTGGAAAGTGCAATGAG17591.7903672339386043No Hit
CATAGATCTAGCCCATCACTTCAGCAGGCCCTTCAGCATCATTTCTATGT15041.5308199658008306No Hit
CATAGATGAAGGCAGAAAAGGAAGAACAACAACAAAACTCGTGACTTCTA10831.1023125152674864No Hit
CATAGATCTCACAGAAACTTCCTTGATGAGCATGCCTTTGATAAAACATC9981.0157967592215618No Hit
CATAGATGGCCCAGAATCCTTTGTAGATTTCTTTCACTCTCCCACCATTC8830.8987460304535462No Hit
CATAGACCTCCCATGGTTCCTGATGAGCATGCCTTTGATAAAACATCTAT8740.8895855386369188No Hit
CATAGATTCAGTTTACTTAGAGGCAGACAGTTGTGGAAAGTGCAATGAGT7580.7715169774448335No Hit
CATAGAGGCTGCAGTGAACAATGATCGTCAGTGTACCCTGGGAGAAGAAA6870.6992508753358847No Hit
CATAGATGGTATTTGAGTGGGGAAACAGACACTCTATGTGTAGAACCATG6830.6951795456396059No Hit
CATAGATTCAGAGAAGGACAGCGTGGGCTGGTGTTTTCCTTGATCTATGT6750.6870368862470483No Hit
CATAGACCAGTACGCCTTACCCCTTGGAGGCTGGAGAAAAAGCTCTATGT5680.5781288168715902No Hit
CATAGATTCAGAGAAGGACAGCGTGGGTTGAGGGAGTCTTCTCTATGTGT5630.5730396547512417No Hit
CATAGAGTGTGTAGTGTGGTATAGCGTCAGTGTACCCTGGGAGAAGAAAT5480.5577721683901963No Hit
CATAGAGGCTTCCAGTCCTTTAAAATAAATGAGCATGCCTTTGATAAAAC5360.5455581793013599No Hit
CATAGATGGCAAATGGTGGGATCTCTATGTGTAGAACCATGTCGTCAGTG5190.528255028092175No Hit
CATAGAGCTAATAAAGACATACCTGAGCCATGCTGAAGTCCCATGATCTA5130.5221480335477567No Hit
CATAGAAGTATTCACACTGGGGCCCATTGTAGATTTCTTTCACCTCCTCT4010.4081508020519502No Hit
CATAGAGCAACAATGAAGGTGCATAAAAACTGTCGGAGGTCTATGTGTAG4000.4071329696278805No Hit
CATAGAGGCTTCCAGTCCTTTAAAATAAATGATGGGAGTGTCTGCTGGTC3710.37761582932985915No Hit
CATAGAAGAAGAGGGTGTGGGGAAGGTGGGTTGAGGGAGTCTTCTCTATG3710.37761582932985915No Hit
CATAGATGGTATTTGAGTGGGGAAACAGACGAATGAGGAAACAGGCACTC3680.37456233205765005No Hit
CATAGATTCAGAGAAGGACAGCGTGGTGCTGGAATAGTTGGACTCTATGT3270.33283120267079225No Hit
CATAGAGCTAATAAAGACATACCTGAGCCATAGAGCTAATAAAGACATGC3080.31349238661346795No Hit
CATAGATCTAGCCCATCACTTCAGCATCATTTCTATGTGTAGCAGGCCCT2990.30433189479684064No Hit
CATAGAGCTAATAAAGACATACCTGAGCCATGTCGTCAGTGTACCCTGGG2840.2890644084357951No Hit
CATAGAACATTGATTCCTGGCATGTCAGACCCAGGCTACACATCTATGTG2670.2717612572266102No Hit
CATAGAACACGAAGATTTCAGATTAGCCTCTCCAGTTTCTACGTGATCTA2380.24224411692858888No Hit
CATAGAGCTCATTCAACTAATAACTGGTAGACCATGTCGTCAGTGTACAG2350.23919061965637978No Hit
CATAGATGGTATTTGAGTGGGGAAACAGGCCCTTCAGCATCATTTCTATG2310.23511928996010098No Hit
CATAGAACATTGATTCCTGGCATGTCCCATGATTTACCATCACAAATTTT2260.23003012783975244No Hit
CATAGATTCTTTCCTGGCTGTGGGTGTACCCTGGGAGAAGAAATGTTGGT1990.20254865238987052No Hit
CATAGATTCTTTCCTGGCTGTGGGTGCATAAAAACTGTCGGAGGTCTATG1950.19847732269359172No Hit
CATAGATCTAGCCCATCACTTCAGCATCATTTCTATGTGCAGGCCCTTCA1940.19745949026952203No Hit
CATAGATGGGACAGCGACAATGACAGTGTACAGTTGTGGAAAGTGCAATG1940.19745949026952203No Hit
CATAGATCTAGCCCATCACTTCAGCATCGCAGGCCCTTCAGCATCATTTC1930.1964416578454523No Hit
CATAGAGCAACCCCAGCAGTTTGAGAAAAGATGCAGTACAGCTCTATGTG1890.19237032814917351No Hit
CATAGATCTAGCCCATCACTTCAGCAGCAGGCCCTTCAGCATCATTTCTA1810.18422766875661592No Hit
CATAGATGGCAAATGGTGGGATCTCTGCTACATGATGGGAGTGTCTGCTG1810.18422766875661592No Hit
CATAGAAATTTTTCAGAGACAGTTGGGACGACAGTTGTGGAAAGTGCAAT1770.1801563390603371No Hit
CATAGATGGGACAGCGACAATGACAGTGTGCAGGCCCTTCAGCATCATTT1770.1801563390603371No Hit
CATAGAACACGAAGATTTCAGATTAGCCTGGCAAATGGTGGGTTGAGGGA1760.1791385066362674No Hit
CATAGAAATTTTTCAGAGACAGTTGGGACAGTGCATAAAAACTGTCGGAG1730.1760850093640583No Hit
CATAGATCTAGCCCATCACTTCAGCATCAGCAGGCCCTTCAGCATCATTT1630.1659066851233613No Hit
CATAGAGTGTGTAGTGTGGTATAGCGTCAGTGTGGTGGGTTGAGGGAGTC1580.16081752300301277No Hit
CATAGATGGCCCAGAATCCTTTGTAGATTTCCCCATTGTAGATTTCTTTC1500.15267486361045518No Hit
CATAGAGGGGTAATACTTCCTACTTCTGCATTAGGAAGTCTTCTCAGCTT1490.15165703118638546No Hit
CATAGAGGCTGCAGTGAACAATGATCGTCAGTGTATGTGCTCGTATCTTG1470.14962136633824608No Hit
CATAGATTCCTCCAAAGACTGCAGGGGAAGAGGGAAGATGATGTGTTCAG1300.13231821512906117No Hit
CATAGATGCCACCACACCCAGTTAATTTTTGTATTTTTAGTAGAGACAGG1230.12519338816057324No Hit
CATAGAAGAAGAGGGTGTGGGGAAGGAGAGTCTGGCTCACTGGGTGCCAG1220.12417555573650355No Hit
CATAGACCAGTACGCCTTACCCCTTGCAGCAACCGATGCACTGGTCCAGC1190.12112205846429444No Hit
CATAGAAGTATTCACACTGGGGCCCAAGTCTCACCAACATGCTTTTAGTC1180.12010422604022473No Hit
CATAGACCTCCCATGGTTCCTGATGACCTCCCATGATTTACCATCACAAA1100.11196156664766711No Hit
CATAGAAGTATTCACACTGGGGCCCAGTATGAGCATGCCTTTGATAAAAC1090.11094373422359742No Hit
CATAGATTCTTTCCTGGCTGTGGGTGGGCTGGTGTTTTCCTTGATCTATG1090.11094373422359742No Hit
CATAGAGCTAATAAAGACATACCTGAGCCAACTGTTTTTTCTATGTGTAG1070.10890806937545804No Hit
CATAGATCTCACCGAAACTTCCTTGATGTTCGCACCCAAGCTCTATGTGT1070.10890806937545804No Hit
CATAGATCTAGCCCATCACTTCAGCATCATTTCTATGGCAGGCCCTTCAG1060.10789023695138833No Hit
CATAGAGCTAATAAAGACATACCTGAGCCAGTGTGCCATGCTGAAGTCCC1010.10280107483103983No Hit
CATAGATCTAGCCCATCACTTCAGCATCATTTCTAGCAGGCCCTTCAGCA1000.10178324240697012No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)