FastQCFastQC Report
Wed 28 Jun 2023
EGAF00005804552

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005804552
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences154518
Sequences flagged as poor quality0
Sequence length150
%GC47

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
CATAGATCATGGGACTTCAGCATGGCGGTGTTTGCAGATTTGGACCTGCG5862837.94250508031426No Hit
CATAGAGGGCTGTTTTGAGTGTTTGCCGTGGAGGAAAGGAGGTCTATGAG74704.834388226614375No Hit
CATAGAGCTTCTGATCACTTTCGCCCCACCCTTATGATCGTATCTATGAG53253.446200442666874No Hit
CATAGAACTTGTAATCATTCCCTACTTCCCACACTCATGCAAAGCTGGTC42022.719424274194592No Hit
CATAGAACCAGAGTAATGAGGGATGCTCAGGTCTCCAATGGTGTCTATGA39852.5789875613197166No Hit
CATAGAACCAGAGTAATGAGGGATGCTCTCTCCAGAACCCACCATCTATG30821.994589627098461No Hit
CATAGATGTGGCTATGCAGACTGAGCAGAGTTGGGTGTGTCTATGAGACC29331.8981607320829936No Hit
CATAGACTCAAGCAATCCTCCCACCTCAGCCTCCCAAATAGCCAGGACTA28751.8606246521440866No Hit
CATAGAACTTTGTGCCCCCAGTGTCTTAGGTAGAGGAGTTTCAAACATCT27011.7480164123273665No Hit
CATAGACTCAAGCAATCCTCCCACCTCAGCCTCCCAAGTAGCCAGGACTA23811.540920798871329No Hit
CATAGATCATGCAAAGAACACAGGCCACACTCATGCAAAGCTGGTCTATG21311.3791273508587996No Hit
CATAGAACTTTGTGCCCCCAGTGTCTCCCCTCTATGAGACCAAGTCTCTG15891.0283591555676361No Hit
CATAGAGGGCTGTTTTGAGTGTTTGCAGATTTGGACCTGCGAGCGGGTTC14690.950698300521622No Hit
CATAGATGTGGCTATGCAGACTGAGTAGAGTTGGGTGTGTCTATGAGACC9660.6251698831204131No Hit
CATAGATCATGCAAAGAACACAGGCAGATCATGAGGTCAGGTCTATGAGA9030.5843979342212557No Hit
CATAGAGGGCTGTTTTGAGTGTTTGCCGTGGAGGGAAGGAAGGGCAAACT7450.48214447507733726No Hit
CATAGAGGGCTGTTTTGAGTGTTTGCCGTGGAGGAAAGCAATCACCGCCA7410.47955577990913684No Hit
CATAGAACTTTGTGCCCCCAGTGTCTCCCCTCTATGAGACCAAGTTCTTA6540.42325166000077663No Hit
CATAGAACTTTGTGCCCCCAGTGTCTTCTTATAGCCAGTGTCTCCCCTCT5870.3798910159334188No Hit
CATAGATGTGCCTCTCCAACATTCATTTCCCCTCTCTCTGAATAACTCTA5300.3430021097865621No Hit
CATAGAAGGAGGGGAAACTGAGGCCAAGGAGGGAAGGAAGGGCAAACTCT5130.3320001553217101No Hit
CATAGAACTTTGTGCCCCCAGTGTCTCCCTTCTTATAGCCAGTGTCTCCC4950.320351027064808No Hit
CATAGAAGGAGGGGAAACTGAGGCCAAGTCTCTGCAGGAGGGAAGGAAGG4940.31970385327275785No Hit
CATAGAAGGAGGGGAAACTGAGGCCAAGTCTCTGGAGGGAAGGAAGGGCA4940.31970385327275785No Hit
CATAGAGGGCTGTTTTGAGTGTTTGCCATGTCTTCTGTGTTTGGTCTATG4880.3158208105204572No Hit
CATAGATGTGGCTATGCAGACGGAGTGAGGGCAGTAAGTCTATGAGACCA4790.3099962463920061No Hit
CATAGAAGGAGGGGAAACTGAGGCCAAGTGGAGGGAAGGAAGGGCAAACT4680.3028773346794548No Hit
CATAGAAGGAGGGGAAACTGAGGCCAGGAGGGAAGGAAGGGCAAACTCTA4650.3009358133033045No Hit
CATAGAAGGAGGGGAAACTGAGGCCAAGTCTCTGGGAGGGAAGGAAGGGC4630.29964146571920425No Hit
CATAGAACTTTGTGCCCCCAGTGTCTCCCCTCTATGAGACCAAGTCTTCT4350.281520599541801No Hit
CATAGAGCCTGGGGTAGTTTTCTCTCACACATGGTTCTACACATAGAGCC4310.2789319043736005No Hit
CATAGAACTTTGTGCCCCCAGTGTCTCCCCTTCTTATAGCCAGTGTCTCC4230.2737545140371995No Hit
CATAGAAGATCCCATAGCAGCTTTGCTACCGTAAGTTTTTCCAAATATAA4180.27051864507694895No Hit
CATAGAAGATGGTCTGCTACACTGGTACACTGACCACACTCATGCAAAGC3970.2569279954438965No Hit
CATAGACCCTTCTCCATGCCACACTCATGCAAAGCTGGTCTATGAGACCA3960.2562808216518464No Hit
CATAGAACTTTGTGCCCCCAGTGTCTCCCCTCTTCTTATAGCCAGTGTCT3820.24722038856314477No Hit
CATAGAAGGAGGGGAAACTGAGGCCAAGGGAGGGAAGGAAGGGCAAACTC3700.23945430305854334No Hit
CATAGAGGGGCATGCTGGATAAATCTAGAGTCTCGCTAATAGTTTTTCCA3680.23815995547444313No Hit
CATAGAAGGAGGGGAAACTGAGGCCATGGGTCCTTTTCACATCATCTATG3560.2303938699698417No Hit
CATAGAACTTTGTGCCCCCAGTGTCTCCCCTCTATGAGACCAAGTCTCTT3550.2297466961777916No Hit
CATAGACTCAAGCAATCCTCCCACCTCAGCTTCCCTAAGTACCAGGATTA3520.22780517480164125No Hit
CATAGAGCCTGGGGTAGTTTTCTCTCATTTCCCCTCTCTCTGAATAACTC3520.22780517480164125No Hit
CATAGAAGATGGTCTGCTACACTGGTACACTGACGCCATGGGTCCTTTTC3360.21745039412883935No Hit
CATAGAGCTTCTGATCACTTTCGCCCTCTCTCCAGAACCCACCATCTATG3330.215508872752689No Hit
CATAGATTAAATGCTGCTATGAGAGAGGTACACTGACGACATGGTTCTAC3300.21356735137653865No Hit
CATAGATCATGGGACTTCAGCATGGCGGTGTTTGCAGATTCGGACCTGCG3280.21227300379243844No Hit
CATAGAAGAATTGCTTGAATCCGGGAGGCAGAGGTTGCAGTGAGCTGAGA3230.20903713483218783No Hit
CATAGACCCTTCTCCATGCCACATCAGGGATTATCAGTAGTGCTCACATC3220.2083899610401377No Hit
CATAGAACACAGATCTGCTTGGAGGGAAGGAAGGGCAAACTCTATGAGAC3200.20709561345603747No Hit
CATAGAACCAGAGTAATGAGGGATGCTCCTCTATGAGACCAAGTCTCTGC3130.20256539691168668No Hit
CATAGATCATGGGACTTCAGCATGGCGGTGTTTGCAGATTTGGGCCTGCG3120.20191822311963653No Hit
CATAGAAGGAGGGGAAACTGAGGCCAAGTAGGAAAGCAATCACCGCCAGT3000.19415213761503514No Hit
CATAGATCATGGGACTTCAGCATGGCGGTGTTTGCGGATTTGGACCTGCG2920.1889747472786342No Hit
CATAGAAGGAGGGGAAACTGAGGCCAAGAGGAAAGCAATCACCGCCAGTC2910.1883275734865841No Hit
CATAGAGCCTGGGGTAGTTTTCTCTCACATGGTTCTACACATAGAGCCAT2870.18573887831838362No Hit
CATAGATCATGGGACTTCAGCATGGCGGTGTTCGCAGATTTGGACCTGCG2720.17603127143763186No Hit
CATAGATGTGGCTATGCAGACTGAGTGAGGGCAGTAAGTCTATGAGACCA2630.1702067073091808No Hit
CATAGATGTTAGGTGCTCATTTTAAAACATCATTCACCAAGTCACCCAGC2620.1695595335171307No Hit
CATAGAGGGCTGTTTTGAGTGTTTGCTACCGTAGACGGAGTGAGGGCAGT2600.16826518593303044No Hit
CATAGAAGGAGGGGAAACTGAGGCCAAGTCTCTGCTACCGTAGGAGGGAA2540.16438214318072975No Hit
CATAGATCATGGGACTTCAGCATGGCGGTGTCTGCAGATTTGGACCTGCG2450.1585575790522787No Hit
CATAGAACTTTGTGCCCCCAGTGTCTCCCCTCTATTCTTATAGCCAGTGT2410.15596888388407823No Hit
CATAGACCATTTGCCGCGTTCTGAAGTAGATCATTTCCCCTCTCTCTGAA2380.15402736250792787No Hit
CATAGATCATGGGACTTCAGCATGGCGGTGTTTGCAGATTTGGACCCGCG2300.14884997217152696No Hit
CATAGAGTCTCGCTAATAGTTTTACCTCAAATAGTTTTTCCAAATATAAG2190.14173106045897566No Hit
CATAGATCATGCAAAGAACACAGGCCCCACCCTTATGATCGTATCTATGA2140.13849519149872505No Hit
CATAGATGTGGCTATGCAGACTGAGTAGACTGAGCAGAGTTGGGTGTGTC2110.13655367012257472No Hit
CATAGAAGATGGTCTGCTACACTGGTGTTCCACACTCATGCAAAGCTGGT2110.13655367012257472No Hit
CATAGATCATGGGACTTCAGCATGGCGGTGTTTGCAGACTTGGACCTGCG2020.13072910599412366No Hit
CATAGATCATGGGACTTCAGCATGGCGGTGCTTGCAGATTTGGACCTGCG2010.13008193220207356No Hit
CATAGAAGATCCCATAGCAGCTTTGCCGTGGAGGAAAGGAGGTCTATGAG1980.1281404108259232No Hit
CATAGATCACCTACACAGACAGCTTTCCACACTGACGACATGTCCACACT1980.1281404108259232No Hit
CATAGAACACAGATCTGCTTGGAGGTGGAGGGAAGGAAGGGCAAACTCTA1960.12684606324182296No Hit
CATAGAACTTTGTGCCCCCAGTGTCTAATAGTTTTTCCAAATATAAGATC1850.11972715152927167No Hit
CATAGAACTTTGTGCCCCCAGTGTCTCTCTCCAGAACCCACCATCTATGA1780.11519693498492085No Hit
CATAGATCATGGGACTTCAGCATGGCATGTTGAGATGAATAATTGAGACT1780.11519693498492085No Hit
CATAGAAGGAGGGGAAACTGAGGCCAGACGCCGTGGCTCACACCTGTAAT1780.11519693498492085No Hit
CATAGAAGGAGGGGAAACTGAGACCAAGTCTCTGCTACCGTAGAAGTCAA1770.11454976119287072No Hit
CATAGATGTGGCTATGCAGACTGAGTGGGGGCAGATTAACAGGTCATCTA1700.1100195446485199No Hit
CATAGATCATGGGACTTCAGCATGGCGGTGTTTGCAGGTTTGGACCTGCG1640.10613650189621922No Hit
CATAGAGGAAGTGCCTACCTTAAATTGATGGAGACAGCCGCTCACCTCTA1620.10484215431211899No Hit
CATAGATCATGGGACTTCAGCATGGCGGCGTTTGCAGATTTGGACCTGCG1580.10225345914391851No Hit
CATAGATCATGGGACTTCAGCATGGCGGTGTTTGCAGATCTGGACCTGCG1570.1016062853518684No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)