FastQCFastQC Report
Wed 28 Jun 2023
EGAF00005804554

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005804554
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences21146
Sequences flagged as poor quality0
Sequence length150
%GC38

[FAIL]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
CATAGACCTGGGCTTAGGGGCTATACATGGCTATGCAATCTATGAGACCA18468.729783410574104No Hit
CATAGATCCCATCCAATAATAATGAGCAAGCAATGGGGAAAGGATTCTAT17748.389293483401115No Hit
CATAGACCTGGGCTTAGGGGCTACACATGGCTATGCAATCTATGAGACCA14837.013146694410291No Hit
CATAGAGCCAAGGAAAGTTGAATGGAGACAGCCGCTCACCTCTATGAGAC13636.445663482455311No Hit
CATAGAACTTCACAAGGGCTTTAGGGGCTACACATGGCTATGCAATCTAT13306.289605599167691No Hit
CATAGATGTCAAGAGTCTAATTCCTGCTTCCTTCTGCTGGCTATTCTATG10715.0647876666981935No Hit
CATAGATCCCATCCAATAATAATGAGCAAGCAATGGGCAAGCAATGACAG9834.6486333112645415No Hit
CATAGATCATGGGACTTCAGCATGGAGACAGCCGCTCACCTCTATGAGAC8994.251395062896056No Hit
CATAGATCCCATCCAATAATAATGAACAAGCAATGGGGAAAGGATTCTAT7563.575144235316372No Hit
CATAGATCATGGGACTTCAGCATGGCTACACATGGCTATGCAATCTATGA5422.5631325073299913No Hit
CATAGAAACCCCAAAGGCTATGTTCAAAATGGTCAAACAGGAGGTCTATG5142.4307197578738298No Hit
CATAGAGATGTTTGATAAGCAGGGTGAACACTGACTGATACAGGAAGGCC3581.6929915823323558No Hit
CATAGAAAACAGAGTCACAGTCCCCAGTATCCCCAGAAATGTTAGCATGT3201.513288565213279No Hit
CATAGATGCCCTTTTTGTGTACTTCCACTGACGACATGGTTCTACACATA3101.4659982975503643No Hit
CATAGACAGAAACCACCCAGACAACCGTACAAGCAATGGGGAAAGGATTC2481.1727986380402913No Hit
CATAGATGCCCTTTTTGTGTACTTCCACACTGACGACATGGTTCTACACA1970.9316182729594249No Hit
CATAGATCCTCTCATTGTCCAGTTTGGAGACAGCCGCTCACCTCTATGAG1790.8464957911661779No Hit
CATAGATGAAAGCCTGTTGAATTTATGACACTGACTGATACAGGAAGGCC1690.799205523503263No Hit
CATAGATCCCATCCAATAATAATGAGCAAGCAATGACAATGGGCAAGCAA1600.7566442826066395No Hit
CATAGACCTGGGCTTAGGGGCTATACGTGAATGTGGATCAGAACTTCTAT1580.7471862290740565No Hit
CATAGATCCCATCCAATAATAATGAGCAAGCAATGACAGTCAATGGGCAA1530.7235410952425991No Hit
CATAGATCCCATCCAATAATAATGAGCATCCCATCCAATAACAATGGGCA1140.5391090513572306No Hit
CATAGATGTATACAAGCTGTCACAGACAACAAGCAATGGGGAAAGGATTC1110.5249219710583561No Hit
CATAGACCTTTGGGTTCATATCATCTGGAGACAGCCGCTCACCTCTATGA1080.5107348907594818No Hit
CATAGATCCCATCCAATAATAATGAGCAAGCAATGACAGTCTATGAGACC990.46817364986285825No Hit
CATAGATCCCATCCAATAATAATGAGCAAGCAACAATGGGCAAGCAATGA930.43979948926510926No Hit
CATAGATCCCATCCAATAATAATGAGCAATGGGCAAGCAATGACAGTCTA690.3263028468741133No Hit
CATAGATGCCCTTTTTGTGTACTTCCATGGTTCTACACATAGATGCCCTT690.3263028468741133No Hit
CATAGAACTTCACAAGGGCTTTAGGGCTACACATGGCTATGCAATCTATG680.3215738201078218No Hit
CATAGATGTATACAAGCTGTCACAGACAACAATGGGCAAGCAATGACAGT630.2979286862763643No Hit
CATAGAAAACAGAGTCACAGTCCCCAGTAATGTTTATCCCCAGAAATGTT580.2742835524449068No Hit
CATAGATGTCCATCATGTGGAAGCTGCCTTCCTAACCATGGGCATATCTA570.2695545256786153No Hit
CATAGAACTTCACAAGGGCTTTAGGGTACGGTAGCAGAATTACCTCTGGA530.2506384186134494No Hit
CATAGATCCCATCCAATAATAATGAGCATCCAATAATAAATGACCTTCTC520.24590939184715785No Hit
CATAGACAGGGAGGCGTATAAGTGATGGAGACAGCCGCTCACCTCTATGA520.24590939184715785No Hit
CATAGATTGGAACTTTGCCAGCCTTACACTGACGACATGGTTCTACACAT520.24590939184715785No Hit
CATAGATGTCAAGAGTCTAATTCCTGCTGTACCATGTTTTCATCCTGCTT500.23645133831457485No Hit
CATAGAACTTCACAAGGGCTTTAGGGGCTATACGTGAATGTGGATCAGAA480.22699328478199185No Hit
CATAGAAAACAGAGTCACAGTCCCCAGTAATGTTAGCAATCCCCAGAAAT470.22226425801570035No Hit
CATAGATCATGGGACTTCAGCATGGCTATGCAATCTATGAGACCAAGTCT450.2128062044831174No Hit
CATAGAAAACAGAGTCACAGTCCCCAGTAATGTTAGCATGTCTATGAGAG440.20807717771682588No Hit
CATAGATCATGGGACTTCAGCATGGACAAGCAATGGGGAAAGGATTCTAT420.19861912418424288No Hit
CATAGATGTCAAGAGTCTAATTCCTGCTCCCTTCTGCTGGCTATTCTATG400.18916107065165988No Hit
CATAGATCATGGGACTTCAGCATGGCTACACATAGATCATGGGACTTCAG400.18916107065165988No Hit
CATAGACCTTTGGGTTCATATCATCTGGACACTGACGACATGGTTCTACA390.18443204388536838No Hit
CATAGATCATGGGACTTCAGCATGGCTACACATGGCTACACATGGCTACA390.18443204388536838No Hit
CATAGATGAAAGCCTGTTGAATTTATGAGACCAAGTCTCTGCTACCGTAT380.17970301711907688No Hit
CATAGATGCCCTTTTTGTGTGCTTCTTTCAAAAGTCTGGTCTATGAGACC370.1749739903527854No Hit
CATAGAAAACAGAGTCACAGTCCCCAGTAATGTACCATGTTTTCATCCTG370.1749739903527854No Hit
CATAGATCATGGGACTTCAGCATGGCCTGACGACATGGTTCTACACATAG370.1749739903527854No Hit
CATAGACCTTTGGGTTCATATCATCTGGCTACACATGGCTATGCAATCTA360.1702449635864939No Hit
CATAGAGATGTTTGATAAGCAGGGTGTTGATTGTGTTATTGGTAAGGGTC360.1702449635864939No Hit
CATAGATCATGGGACTTCAGCATGGCCAAGCAATGGGGAAAGGATTCTAT330.1560578832876194No Hit
CATAGATCATGGGACTTCAGCATGGCTTCCTAACCATGGGCATATCTATG320.1513288565213279No Hit
CATAGAGCTGGCTTCCTAACTTCCAAGTCTCATAGAATCCTTTCCCTCAC300.1418708029887449No Hit
CATAGATCCCATCCAATAATAATGAGCAAGCAATGGAGACAGCCGCTCAC300.1418708029887449No Hit
CATAGAGGATCCCATCTGAGTTGGTCTCATAGAATCCTTTCCCTCACTCT300.1418708029887449No Hit
CATAGATCATGGGACTTCAGCATGGCCTTCCTAACCATGGGCATATCTAT280.1324127494561619No Hit
CATAGATTTGTAAATTGCCTAGTCTTGCACAGATCATTTAAGCTCAATCT280.1324127494561619No Hit
CATAGACAATTAAATTTTCTTAAGGGGTTGCACTGACGACATGGTTCTAC280.1324127494561619No Hit
CATAGATTGGAACTTTGCCAGCCTTTCCCTCACTCTCTCCATCTATGAGA280.1324127494561619No Hit
CATAGAAAACAGAGTCACAGTCCCCAGTAATGTTAGCATGTCTATGAGAC270.12768372268987044No Hit
CATAGAGGATCCCATCTGAGTTGGTCTCATAGATGGAGACAGCCGCTCAC260.12295469592357892No Hit
CATAGATGAAAGCCTGTTGAATTTATGAGACCAAGTCTCAGTGTACCTGA250.11822566915728742No Hit
CATAGATCATGGGACTTCAGCATGGCGACAGCCGCTCACCTCTATGAGAC240.11349664239099592No Hit
CATAGATCATGGGACTTCAGCATGGCTGCTTCCTTCTGCTGGCTATTCTA230.10876761562470443No Hit
CATAGATGCCCTTTTTGTGTACTTCCATGGTTCTACACATAGGTGCCCTT220.10403858885841294No Hit
CATAGATGAAAGCCTGTTGAATTTATGAGACCAAGTCTCTGCTACCGTAA220.10403858885841294No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)