FastQCFastQC Report
Wed 28 Jun 2023
EGAF00005804566

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005804566
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences171511
Sequences flagged as poor quality0
Sequence length150
%GC37

[FAIL]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
CATAGACGCGGTATTGTCAGGAGCTAACTGGGATACTGCTCTATGAGACC128337.482318918320107No Hit
CATAGATTACTGGGAGACTGGCGCTCACCTCTATGAGACCAAGTCTCTGC95115.5454169120347965No Hit
CATAGACCTGGTACTTCTCTTCTGGGTCCATTTTTGGTTCTCTTCTATGA93935.4766166601559085No Hit
CATAGAACTGAGGCTGGTAGAGGGAGGCGTGGTATGAGGGGAATCTATGA83774.88423483041904No Hit
CATAGAACTTGTGCTTTTGGTGTCACCCGTAATCCCTCCCTTTTCTATGA63053.676149051664325No Hit
CATAGAGGGAAGAGAAGAGGAGCTGACATCCCAACCACACGTCTATGAGA52193.042953513185743No Hit
CATAGATGTCCCCATTCATCCTGCAAACAGAATGGGACCCATCTATGAGA52183.0423704602037187No Hit
CATAGAAGCTGTCGTTTGTCAACTCCTGGGCCCATAATACACTTTTCTAT49332.876200360326743No Hit
CATAGACAGTCCTGCCGTGTACATGTACAGCCTACATCCCTCATCTATGA47042.742681227443138No Hit
CATAGAAAAGTCACCATGCAGCCCTGTGATTGTCCTTGCACACCATGGAT36352.1193975896589725No Hit
CATAGATTACTGGAGACAGCCGCTCACCTCTATGAGACCAAGTCTCTGCT36322.1176484307128987No Hit
CATAGAGGATCTCAGGAGTTTAGGTGGGAGGAACAGGGAGATGTTCTATG32871.9164951519144546No Hit
CATAGAAAAGTCACCATGCAGCCCTGGGCCCATAATACACTTTTCTATGA29461.717674085044108No Hit
CATAGAGCACCCAACTATCCTTCAGCATGAGAAGAATGGCCTCTATGAGA23701.3818355673980094No Hit
CATAGACGCGGTATTGTCAGGAGCTGACTGGGATACTGCTCTATGAGACC22741.3258624811236597No Hit
CATAGAAAAGTCACCATGCAGCCCTGGCAAAAGGGTAAGAGTTCTATGAG19921.1614415401927574No Hit
CATAGAGGCAAGCTAACTCTGAGATCCATCAGAGCATCACCCCTTCTATG18781.0949735002419672No Hit
CATAGAATCCCTGCCCTTGACCTTGGTGAAAAGTAGGGGACAGTTCTATG17231.004600288028173No Hit
CATAGATCATGAATGACTCCCACTCTGTAGATTATGCTCTCTTCCGCCTT16800.9795290098011207No Hit
CATAGAAAAGTCACCATGCAGCCCTGCCGTGTACAGCCTACATCCCTCAT16410.9567899435021661No Hit
CATAGAATTGCCTACTTTGGGACCCATCTATGAGACCAAGTCTCTGCTAC16260.9480441487717989No Hit
CATAGACAGTATGGGGGAAACGGCTCTCTTCCGCCTTTATCCTTCTATGA15840.9235559235267708No Hit
CATAGATTACTGGGAGACAGCCGCTCACCTCTATGAGACCAAGTCTCTGC15280.8909049565334002No Hit
CATAGAAGCTGTCGTTTGTCAACTCCTCCTGGGCCCATAATACACTTTTC14650.8541726186658583No Hit
CATAGACGTCTTTTGTGGGTTTTCTTTCTTGAGGTTCTTCAACACAGCTA13230.7713790952183824No Hit
CATAGAACTTGTGCTTTTGGTGTCACTTGATCATCCATTGTCTGCTCTAT12250.7142399029799837No Hit
CATAGACGCGGTATTGTCAGGAGCTGACATCCCAACCACACGTCTATGAG12100.7054941082496167No Hit
CATAGATGTGTGAGAGAGGGAGAGACAGCCTTCTCTGATACCATCCCTCT11970.6979144194832985No Hit
CATAGAAAAGTCACCATGCAGCCCTGCCCTTGTCCTTGCACACCATGGAT11580.6751753531843439No Hit
CATAGAATTGCCTACTTTGGGACCCATCGGCCGCACTGAAATTGTCTATG10460.6098734191976025No Hit
CATAGATTACTGGGAGACTGGCGCTCTCTTCCGCCTTTATCCTTCTATGA9800.5713919223839871No Hit
CATAGAATCCCTGCCCTTGTCCTTGCACACCATGGATCTATGAGACCAAG9780.5702258164199381No Hit
CATAGATGCACCAGAAGCCACCTACCAAGTATATGACACATTACACCAGT9520.5550664388873017No Hit
CATAGACCCCCATGCAACCACATCTACACTGACGACATGGTTCTACACAT9140.5329104255703715No Hit
CATAGAATCCCTGCCCTTGACCTTGGGGGAAGAGAAACAGAATCTATGAG9040.5270798957501268No Hit
CATAGAGGTTCTTTGTAGACTTACTTGGCAAAAGGGTAAGAGTTCTATGA8830.5148357831276128No Hit
CATAGACCCCCATGCAACCACATCTATACAATGGGCACACTTAACACCTC8620.5025916705050988No Hit
CATAGATCCAGGGAGCTTTCAAGTGTCGAACAAGGGCATGGTCAAGTGTC8430.49151366384663375No Hit
CATAGAAGCTGTCGTTTGTCAACTCCTATAGATTATGCTCTCTTCCGCCT8420.49093061086460926No Hit
CATAGAATCCCTGCCCTTGACCTTGGGAGGAACAGGGAGATGTTCTATGA8360.4874322929724624No Hit
CATAGAGGTTCTTTGTAGACTTACTTGGCATGAGGTTCTTCAACACAGCT8160.47577123333197285No Hit
CATAGAATCCCTGCCCTTGACCTTGGTTCCTATCTCAACTCCCAGCTCCT7700.448950796158847No Hit
CATAGATGTCCCCATTCATCCTGCAACCGTACTTAGGAGTTCTGGCCCCT7690.4483677431768225No Hit
CATAGAATTGCCTACTTTGGGACCCATGCAAACAGAATGGGACCCATCTA7370.4297100477520392No Hit
CATAGAGGTTCTTTGTAGACTTACTTGGCAAAAGGGCAAGTGTATGGTCA6960.40580487548903565No Hit
CATAGAGACCCCCAAGTAGCCTAACTGGCTCTCTTCCGCCTTTATCCTTC6960.40580487548903565No Hit
CATAGAGACCCCCAAGTAGCCTAACTGGTGGTGCTGGAACTAGTTCTATG6550.3818997032260321No Hit
CATAGAATTGCCTACTTTGGGACCCATCTATGCAAACAGAATGGGACCCA6500.3789844383159098No Hit
CATAGACCCACTTACACACACAGGTTTTCCGGCTTGAGGTTCTATGAGAC6290.36674032569339576No Hit
CATAGAATTGCCTACTTTGGGACCCAGCATGAGAAGAATGGCCTCTATGA6060.35333010710683277No Hit
CATAGATGCACCAGAAGCCACCTACCGTATTCCAACTCTATAGATTATGC6060.35333010710683277No Hit
CATAGATGGCATGTCACTTCCTCAGAGCATCACCCCTTCATTTTGCTGGA5790.3375876765921719No Hit
CATAGAGCAGTGCAGCAGAAGATAGCTCTCTTCCGCCTTTATCCTTCTAT5760.3358385176460985No Hit
CATAGATGTGTGAGAGAGGGAGAGACAGTGTAGGGCAAGTGTATGGTCAG5490.3200960871314376No Hit
CATAGAATTCCCCAATGTCCTGTGCAAACAGAATGGGACCCATCTATGAG5370.3130994513471439No Hit
CATAGAGACCCCCAAGTAGCCTAACTGCCCCCAAGTATATGACACATTAC5080.2961909148684341No Hit
CATAGAGTCATTCCAAACTGTGCACTTGTCCTTGCACACCATGGATCTAT4940.28802817312009144No Hit
CATAGATGCACCAGAAGCCACCTACCGTACCAAGTATATGACACATTACA4940.28802817312009144No Hit
CATAGACAGAACACCACACCCCTGTCCTTGCACACCATGGATCTATGAGA4870.28394680224592006No Hit
CATAGAAGGGCAATTATCTCATCCTAGACGAAGGGCAAGTGTATGGTCAG4850.28278069628187114No Hit
CATAGACAGAACACCACACCCCTGTCCTTGTCCTTGCACACCATGGATCT4840.28219764329984665No Hit
CATAGAATTGCCTACTTTGGGACCCATCTATGAGACCAAGTGCAAACAGA4810.28044848435377323No Hit
CATAGAAAAGTCACCATGCAGCCCTGGTGGTGCTGGAACTAGTTCTATGA4810.28044848435377323No Hit
CATAGATTGCCTCATTGTGCCAGACAATGGGCACACTTAACACCTCTATG4690.2734518485694795No Hit
CATAGACCATGTAATACCATCGTGAGCAGCACCCCTTCATTTTGCTGGAA4660.2717026896234061No Hit
CATAGATCATGGGACTTCAGCATGGCGGTGTTTGCAGATTTGGACCTGCG4200.24488225245028017No Hit
CATAGAGGTTCTTTGTAGACTTACCTGGCAAAAGGGTAAGAGTTCTATGA4060.2367195107019375No Hit
CATAGAATCCCTGCCCTTGACCTTGCACACCATGGATCTATGAGACCAAG4010.2338042457918151No Hit
CATAGAATTGCCTACTTTGGGACCCATCTATGAGACCAAGTCTCTGCAAA3830.2233092921153745No Hit
CATAGATCTGGGAGGTGAAGAGGACACACTGACGACATGGTTCTACACAT3830.2233092921153745No Hit
CATAGAATTGCCTACTTTGGGACCCACTTTGTTCCCTGGCTTCTCTATGA3790.22097708018727663No Hit
CATAGAGGGAAGAGAAGAGGAGCTGCCTGGGCCCATAATACACTTTTCTA3650.21281433843893394No Hit
CATAGACCCACTTACACACACAGGTTTTCCGGCTTGAGGTTCTTCAACAC3570.20814991458273815No Hit
CATAGAACTGAGGCTGGTAGAGGGAGCCTTGGAGGCCTAGCCTGGCAGCT3430.19998717283439543No Hit
CATAGAATTGCCTACTTTGGGACCCATCTGCAAACAGAATGGGACCCATC3360.19590580196022414No Hit
CATAGAGCATCCTCGTAATAGCAAACATTGTCCTTGCACACCATGGATCT3290.1918244310860528No Hit
CATAGACAGAACACCACACCCCTGTCCCACAGCCCAGTTTTCCTTCTCTA3190.18599390126580803No Hit
CATAGAATCACTTGAGTTTGTAAAAGCAGACAATGGGCACACTTAACACC3080.17958031846353878No Hit
CATAGAACTTGTGCTTTTGGTGTCACAAGCACATTATTATTGGTTGGTTC3070.1789972654815143No Hit
CATAGAATTCCCCAATGTCCTGTGCACACCATGGATCTATGAGACCAAGT3050.17783115951746536No Hit
CATAGATCATGAATGACTCCCACTCTGGGAGGAACAGGGAGATGTTCTAT2990.17433284162531848No Hit
CATAGATCATGAATGACTCCCACTCTGTTCCCTGGCAAAAGGGTAAGAGT2950.17200062969722058No Hit
CATAGACCATGTAATACCATCGTGAGCAGCTGCCGTGTACAGCCTACATC2900.1690853647870982No Hit
CATAGAGTCATTCCAAACTGTGCACTTGAGTCACTCAAATATAGACCTCA2780.1620887290028045No Hit
CATAGATGTCCCCATTCATCCTGCAACCGTAGAACAAGGGCATGGTCAAG2660.15509209321851075No Hit
CATAGACAGAACACCACACCCCTGTCTTAGGAGTTCTGGCCCCTGTCTAT2390.1393496627038499No Hit
CATAGACAGTCCTGCCGTGTACATGTGTACAGCCTACATCCCTCATCTAT2330.13585134481170305No Hit
CATAGAAGCTGTCGTTTGTCAACTCCTAGTATCTCAACTCCCAGCTCCTT2330.13585134481170305No Hit
CATAGAATTGCCTACTTTGGGACCCAGTCTACAATGGGCACACTTAACAC2250.13118692095550724No Hit
CATAGAGGCAAGCTAACTCTGAGATCCAAGTAGGATGACTTATGGAATCT2190.12768860306336036No Hit
CATAGAGGCAAGCTAACTCTGAGATCCAGCATGAGAAGAATGGCCTCTAT2150.12535639113526245No Hit
CATAGAGGCAAGCTAACTCTGAGATCCAGGGCAAGTGTATGGTCAGTTCT2120.12360723218918902No Hit
CATAGATGTCCCCATTCATCCTGCAACCGTAGTGTACAGCCTACATCCCT2120.12360723218918902No Hit
CATAGATGTCCCCATTCATCCTGCAACAGGGCAAGTGTATGGTCAGTTCT2060.12010891429704218No Hit
CATAGAAGCTGTCGTTTGTCAACTCCTACACTGAGGTTCTTCAACACAGC2050.11952586131501769No Hit
CATAGAATTGCCTACTTTGGGACCCAGTCTCACAATGGGCACACTTAACA2050.11952586131501769No Hit
CATAGATGTGTGAGAGAGGGAGAGACAGGAAAATGTCAGTGGGCCATCTA2010.11719364938691978No Hit
CATAGATCATGGGACTTCAGCATGGCAAAAGGGCAAGTGTATGGTCAGTT1930.11252922553072398No Hit
CATAGAATTGCCTACTTTGGGACCCATCTATGAGACCAAGTCTGCAAACA1850.10786480167452815No Hit
CATAGACTCCTGAGTTCAAGATTCTACCCAAGTATATGACACATTACACC1770.10320037781833234No Hit
CATAGATCCAGGGAGCTTTCAAGTGTCAACAAGGGCATGGTCAAGTGTCT1760.10261732483630788No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)