FastQCFastQC Report
Wed 28 Jun 2023
EGAF00005804567

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005804567
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences171511
Sequences flagged as poor quality0
Sequence length150
%GC35

[FAIL]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
CATAGAGCAGTATCCCAGTTAGCTCCTGACAATACCGCGTCTATGTGTAG133787.800082793523447No Hit
CATAGAGGTGAGCGCCAGTCTCCCAGTAATCTATGTGTAGAACCATGTCG94525.511016786095353No Hit
CATAGAAGAGAACCAAAAATGGACCCAGAAGAGAAGTACCAGGTCTATGT94365.501687938382961No Hit
CATAGATTCCCCTCATACCACGCCTCCCTCTACCAGCCTCAGTTCTATGT85444.981604678417128No Hit
CATAGAAAAGGGAGGGATTACGGGTGACACCAAAAGCACAAGTTCTATGT62513.644664190635003No Hit
CATAGATGGGTCCCATTCTGTTTGCAGGATGAATGGGGACATCTATGTGT52913.0849333278915054No Hit
CATAGACGTGTGGTTGGGATGTCAGCTCCTCTTCTCTTCCCTCTATGTGT51312.9916448507675892No Hit
CATAGAAAAGTGTATTATGGGCCCAGGAGTTGACAAACGACAGCTTCTAT48312.8167289561602464No Hit
CATAGATGAGGGATGTAGGCTGTACATGTACACGGCAGGACTGTCTATGT46742.7251896379824037No Hit
CATAGAGGTGAGCGGCTGTCTCCAGTAATCTATGTGTAGAACCATGTCGT43812.5543551142492316No Hit
CATAGATCCATGGTGTGCAAGGACAATCACAGGGCTGCATGGTGACTTTT36152.107736530018483No Hit
CATAGAACATCTCCCTGTTCCTCCCACCTAAACTCCTGAGATCCTCTATG33261.9392342182134088No Hit
CATAGAAAAGTGTATTATGGGCCCAGGGCTGCATGGTGACTTTTCTATGT29511.7205893499542304No Hit
CATAGAGGCCATTCTTCTCATGCTGAAGGATAGTTGGGTGCTCTATGTGT23661.3795033554699114No Hit
CATAGAGCAGTATCCCAGTCAGCTCCTGACAATACCGCGTCTATGTGTAG23151.3497676533866634No Hit
CATAGAACTCTTACCCTTTTGCCAGGGCTGCATGGTGACTTTTCTATGTG20141.1742687057972958No Hit
CATAGAAGGGGTGATGCTCTGATGGATCTCAGAGTTAGCTTGCCTCTATG18531.080397175691355No Hit
CATAGAACTGTCCCCTACTTTTCACCAAGGTCAAGGGCAGGGATTCTATG17561.0238410364349808No Hit
CATAGAGGTGAGCGGCTGTCTCCCAGTAATCTATGTGTAGAACCATGTCG17110.9976036522438794No Hit
CATAGAAGGATAAAGGCGGAAGAGAGCATAATCTACAGAGTGGGAGTCAT16450.9591221554302639No Hit
CATAGATGAGGGATGTAGGCTGTACACGGCAGGGCTGCATGGTGACTTTT16110.9392983540414318No Hit
CATAGAAGGATAAAGGCGGAAGAGAGCCGTTTCCCCCATACTGTCTATGT15710.9159762347604526No Hit
CATAGAAAAGTGTATTATGGGCCCAGGAGGAGTTGACAAACGACAGCTTC14480.844260717971442No Hit
CATAGAATAGCTGTGTTGAAGAACCTCAAGAAAGAAAACCCACAAAAGAC13130.7655485653981376No Hit
CATAGACGTGTGGTTGGGATGTCAGCTCCTGACAATACCGCGTCTATGTG12280.7159890619260572No Hit
CATAGAGCAGACAATGGATGATCAAGTGACACCAAAAGCACAAGTTCTAT12060.7031618963215187No Hit
CATAGAGGGATGGTATCAGAGAAGGCTGTCTCTCCCTCTCTCACACATCT11910.6944161015911516No Hit
CATAGATCCATGGTGTGCAAGGACAAGGGCAGGGCTGCATGGTGACTTTT11550.6734261942382704No Hit
CATAGACAATTTCAGTGCGGCCGATGGGTCCCAAAGTAGGCAATTCTATG10440.6087073132335535No Hit
CATAGATCCATGGTGTGCAAGGACAAGGGCAGGGATTCTATGTGTAGAAC9830.5731410813300605No Hit
CATAGAAGGATAAAGGCGGAAGAGAGCGCCAGTCTCCCAGTAATCTATGT9670.5638122336176689No Hit
CATAGATGGGTCCCAAAGTAGGCAATTCTATGTGTAGAACCATGTCGTCA9440.5504020150311059No Hit
CATAGACTGGTGTAATGTGTCATATACTTGGTAGGTGGCTTCTGGTGCAT9430.5498189620490814No Hit
CATAGATTCTGTTTCTCTTCCCCCAAGGTCAAGGGCAGGGATTCTATGTG9030.5264968427681024No Hit
CATAGAACTCTTACCCTTTTGCCAAGTAAGTCTACAAAGAACCTCTATGT9020.5259137897860778No Hit
CATAGAACATCTCCCTGTTCCTCCCAAGGTCAAGGGCAGGGATTCTATGT8510.4961780877028295No Hit
CATAGAGGTGTTAAGTGTGCCCATTGTATAGATGTGGTTGCATGGGGGTC8420.49093061086460926No Hit
CATAGACACTTGACCATGCCCTTGTTCGACACTTGAAAGCTCCCTGGATC8370.4880153459544869No Hit
CATAGAAGGATAAAGGCGGAAGAGAGCATAATCTATAGGAGTTGACAAAC8170.47635428631399734No Hit
CATAGAATAGCTGTGTTGAAGAACCTCATGCCAAGTAAGTCTACAAAGAA8000.46644238561958123No Hit
CATAGACAGGGGCCAGAACTCCTAAGTACGGTTGCAGGATGAATGGGGAC7670.44720163721277356No Hit
CATAGAAGGAGCTGGGAGTTGAGATAGGAACCAAGGTCAAGGGCAGGGAT7660.446618584230749No Hit
CATAGATGGGTCCCATTCTGTTTGCATGGGTCCCAAAGTAGGCAATTCTA7470.435540577572284No Hit
CATAGAACTGACCATACACTTGCCCTTTTGCCAAGTAAGTCTACAAAGAA6910.4028896105789133No Hit
CATAGAAGGATAAAGGCGGAAGAGAGCCAGTTAGGCTACTTGGGGGTCTC6810.3970590807586685No Hit
CATAGAACTAGTTCCAGCACCACCAGTTAGGCTACTTGGGGGTCTCTATG6670.3888963390103259No Hit
CATAGATGGGTCCCATTCTGTTTGCATAGATGGGTCCCAAAGTAGGCAAT6620.3859810741002035No Hit
CATAGAACCTCAAGCCGGAAAACCTGTGTGTGTAAGTGGGTCTATGTGTA6220.3626589548192244No Hit
CATAGAGGCCATTCTTCTCATGCTGGGTCCCAAAGTAGGCAATTCTATGT6100.35566231903493073No Hit
CATAGAAGAGAGCATAATCTATAGAGTTGGAATACGGTAGGTGGCTTCTG5910.34458431237646564No Hit
CATAGAGTTCCAGCAAAATGAAGGGGTGATGCTCTGAGGAAGTGACATGC5760.3358385176460985No Hit
CATAGAACTGACCATACACTTGCCCTACACTGTCTCTCCCTCTCTCACAC5560.324177458005609No Hit
CATAGAAGGATAAAGGCGGAAGAGAGCTATCTTCTGCTGCACTGCTCTAT5540.32301135204156No Hit
CATAGATGGGTCCCATTCTGTTTGCACAGGACATTGGGGAATTCTATGTG5460.3183469281853642No Hit
CATAGACTGGTGTAATGTGTCATATACTTGGGGGCAGTTAGGCTACTTGG5010.29210954399426275No Hit
CATAGAACTAGTTCCAGCACCACCAGGGCTGCATGGTGACTTTTCTATGT4950.28861122610211587No Hit
CATAGACTGGTGTAATGTGTCATATACTTGGTACGGTAGGTGGCTTCTGG4910.286279014174018No Hit
CATAGATCCATGGTGTGCAAGGACAGGGGTGTGGTGTTCTGTCTATGTGT4880.28452985522794455No Hit
CATAGAACTGACCATACACTTGCCCTTCGTCTAGGATGAGATAATTGCCC4840.28219764329984665No Hit
CATAGATGGGTCCCATTCTGTTTGCACTTGGTCTCATAGATGGGTCCCAA4830.28161459031782216No Hit
CATAGATCCATGGTGTGCAAGGACAAGTGCACAGTTTGGAATGACTCTAT4800.27986543137174874No Hit
CATAGATCCATGGTGTGCAAGGACAAGGACAGGGGTGTGGTGTTCTGTCT4740.2763671134796019No Hit
CATAGAGGTGTTAAGTGTGCCCATTGTCTGGCACAATGAGGCAATCTATG4720.27520100751555293No Hit
CATAGAGTTCCAGCAAAATGAAGGGGTGCTGCTCACGATGGTATTACATG4640.2705365836593571No Hit
CATAGAACTCTTACCCTTTTGCCAGGTAAGTCTACAAAGAACCTCTATGT4140.2413839345581333No Hit
CATAGATCCATGGTGTGCAAGGTCAAGGGCAGGGATTCTATGTGTAGAAC3940.22972287491764376No Hit
CATAGATGGGTCCCATTCTGTTTGCAGAGACTTGGTCTCATAGATGGGTC3920.22855676895359478No Hit
CATAGAGAAGCCAGGGAACAAAGTGGGTCCCAAAGTAGGCAATTCTATGT3760.21922792124120322No Hit
CATAGAGGTGAGCGGCTGTCTCCACAAGTCCGCGCAGAGCCTTCAGGTCA3740.21806181527715424No Hit
CATAGAAAAGTGTATTATGGGCCCAGGCAGCTCCTCTTCTCTTCCCTCTA3670.2139804444029829No Hit
CATAGAACATCTCCCTGTTCCTCCCAGATCTATGTGTAGAACCATGTCGT3590.20931602054678708No Hit
CATAGAATAGCTGTGTTGAAGAACCTCAAGCCGGAAAACCTGTGTGTGTA3490.20348549072654235No Hit
CATAGAACTAGTTCCAGCACCACCAGCTGCCAGGCTAGGCCTCCAAGGCT3430.19998717283439543No Hit
CATAGATGGGTCCCATTCTGTTTGCAGATGGGTCCCAAAGTAGGCAATTC3200.1865769542478325No Hit
CATAGATCCATGGTGTGCAAGGACAATGTTTGCTATTACGAGGATGCTCT3140.18307863635568564No Hit
CATAGAACCAACCAATAATAATGTGCTTGTGACACCAAAAGCACAAGTTC3100.18074642442758773No Hit
CATAGAGGTGTTAAGTGTGCCCATTGTCTGCTTTTACAAACTCAAGTGAT3100.18074642442758773No Hit
CATAGAACATCTCCCTGTTCCTCCCAGAGTGGGAGTCATTCATGATCTAT3090.18016337144556327No Hit
CATAGAGAAGGAAAACTGGGCTGTGGGACAGGGGTGTGGTGTTCTGTCTA3040.17724810653544087No Hit
CATAGAACTCTTACCCTTTTGCCAGGGAACAGAGTGGGAGTCATTCATGA3040.17724810653544087No Hit
CATAGATGAGGGATGTAGGCTGTACACGGCAGCTGCTCACGATGGTATTA2930.17083452373317162No Hit
CATAGAGGTTGAGGTCTATATTTGAGTGACTCAAGTGCACAGTTTGGAAT2700.15742430514660868No Hit
CATAGACACTTGACCATGCCCTTGTTCTACGGTTGCAGGATGAATGGGGA2560.14926156339826602No Hit
CATAGACAGGGGCCAGAACTCCTAAGACAGGGGTGTGGTGTTCTGTCTAT2380.13876660972182542No Hit
CATAGATGAGGGATGTAGGCTGTACACATGTACACGGCAGGACTGTCTAT2360.13760050375777647No Hit
CATAGAAGGAGCTGGGAGTTGAGATACTAGGAGTTGACAAACGACAGCTT2310.13468523884765407No Hit
CATAGAGGTGTTAAGTGTGCCCATTGTAGACTGGGTCCCAAAGTAGGCAA2210.12885470902740934No Hit
CATAGAGCTTCAGATTCCATAAGTCATCCTACTTGGATCTCAGAGTTAGC2170.1265224970993114No Hit
CATAGAACTGACCATACACTTGCCCTGGATCTCAGAGTTAGCTTGCCTCT2130.12419028517121351No Hit
CATAGAGGCCATTCTTCTCATGCTGGATCTCAGAGTTAGCTTGCCTCTAT2110.12302417920716456No Hit
CATAGATGAGGGATGTAGGCTGTACACTACGGTTGCAGGATGAATGGGGA2110.12302417920716456No Hit
CATAGAACTGACCATACACTTGCCCTGTTGCAGGATGAATGGGGACATCT2080.12127502026109112No Hit
CATAGAATAGCTGTGTTGAAGAACCTCAGTGTAGGAGTTGACAAACGACA2040.11894280833299321No Hit
CATAGAACTGACCATACACTTGCCCTTTTGCCATGCTGAAGTCCCATGAT2030.11835975535096875No Hit
CATAGAGGTGTTAAGTGTGCCCATTGTGAGACTGGGTCCCAAAGTAGGCA2010.11719364938691978No Hit
CATAGATCCATGGTGTGCACAGGACATTGGGGAATTCTATGTGTAGAACC1990.11602754342287085No Hit
CATAGATGGCCCACTGACATTTTCCTGTCTCTCCCTCTCTCACACATCTA1990.11602754342287085No Hit
CATAGATTCCCCTCATACCACGCCTCAGTTCTATGTGTAGAACCATGTCG1800.10494953676440578No Hit
CATAGATGGGTCCCATTCTGTTTGCAGACTTGGTCTCATAGATGGGTCCC1790.10436648378238131No Hit
CATAGACTGGTGTAATGTGTCATATACTTGGGTAGAATCTTGAACTCAGG1740.10145121887225891No Hit
CATAGACACTTGACCATGCCCTTGTTGACACTTGAAAGCTCCCTGGATCT1730.10086816589023444No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)