FastQCFastQC Report
Wed 28 Jun 2023
EGAF00005804572

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005804572
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences24850
Sequences flagged as poor quality0
Sequence length150
%GC42

[OK]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
CATAGATCATGGGACTTCAGCATGGCGGTGTTTGCAGATTTGGACCTGCG360014.486921529175051No Hit
CATAGAGAGATTTTGGGCTGAGACGATGGGGTTTTCTAGATATACACTCA12715.114688128772635No Hit
CATAGAGAGATTTTGGGCTGAGACGATAATGCCGCATATCTACAACTATC10404.185110663983903No Hit
CATAGATCCCATCCAATAATAATGAGCAAGCAATGGGGAAAGGATTCTAT10034.036217303822938No Hit
CATAGAACTTCACAAGGGCTTTAGGGGCTACACATGGCTATGCAATCTAT9103.6619718309859155No Hit
CATAGACCTGGGCTTAGGGGCTATACATGGCTATGCAATCTATGAGACCA8623.4688128772635816No Hit
CATAGAGAGATTTTGGGCTGAGACGATGGGGTTTTCTAGATATACAACAA8403.3802816901408446No Hit
CATAGACCTGGGCTTAGGGGCTACACATGGCTATGCAATCTATGAGACCA7613.0623742454728373No Hit
CATAGATGCCCTTTTTGTGTACTTCCACACTGACGACATGGTTCTACACA6992.812877263581489No Hit
CATAGATCCCATCCAATAATAATGAGCAAGCAATGGGCAAGCAATGACAG6152.4748490945674044No Hit
CATAGACACCATGCCTGGCTAATTTTTGTAGTTTTAGTAGAGACGAGGTT5842.3501006036217307No Hit
CATAGACACCATGCCTGGCTAATTTTTTGCGTTTTTAGTAGAGATGGGGT5482.2052313883299797No Hit
CATAGATCCCATCCAATAATAATGAACAAGCAATGGGGAAAGGATTCTAT5342.148893360160966No Hit
CATAGAAACCCCAAAGGCTATGTTCAAAATGGTCAAACAGGAGGTCTATG4171.6780684104627765No Hit
CATAGACACCATGCCTGGCTAATTTTTGTATTTTTAGTAGTGGTGTGGTG4171.6780684104627765No Hit
CATAGATGTCAAGAGTCTAATTCCTGCTTCCTTCTGCTGGCTATTCTATG4081.6418511066398391No Hit
CATAGACACCATGCCTGGCTAATTTTTGTATTTTTAGTAGAGATAGGGTT3501.4084507042253522No Hit
CATAGAAAACAGAGTCACAGTCCCCAGTAATGTTAGCATGTCTATATCCC2470.9939637826961771No Hit
CATAGACACCATGCCTGGCTAATTTTTTGTATTTGTAGTAGGGATGGGGT2270.9134808853118712No Hit
CATAGATGCCCTTTTTGTGTACTTCCACATGGTTCTACACATAGATGCCC2110.8490945674044267No Hit
CATAGAGCCAAGGAAAGTTGAATGGAGACAGCCGCTCACCTCTATGAGAC1770.7122736418511066No Hit
CATAGAAAACAGAGTCACAGTCCCCAGTAATGTACCATGTTTTCATCCTG1750.7042253521126761No Hit
CATAGACCTGGGCTTAGGGGCTATACGTGAATGTGGATCAGAACTTCTAT1600.6438631790744467No Hit
CATAGACACCATGCCTGGCTAATTTTTGTATTTTTTGTAGAGACAGAGTT1570.6317907444668008No Hit
CATAGAAAACAGAGTCACAGTCCCCAGTATCCCCAGAAATGTTAGCATGT1510.607645875251509No Hit
CATAGACACCATGCCTGGCTAATTTTTAAATATTTTGTAGAGACCGGGTT1500.6036217303822937No Hit
CATAGACCTTTGGGTTCATATCATCTGGAGACAGCCGCTCACCTCTATGA1440.579476861167002No Hit
CATAGACAGGGAGGCGTATAAGTGATGACTGATACAGGAAGGCCTTTCTA1360.5472837022132797No Hit
CATAGATCATGGGACTTCAGCATGACGGTGTTTGCAGATTTGGACCTGCG1150.46277665995975853No Hit
CATAGAAAACAGAGTCACAGTCCCCAGTAATGTTAGCATGTCTATGAGAC1150.46277665995975853No Hit
CATAGATGCCCTTTTTGTGTACTTCCATGCCCTTTTTGTGTGCTTCTTTC1090.4386317907444668No Hit
CATAGACAGGGAGGCGTATAAGTGATGTGCTTCTTTCAAAAGTCTGGTCT1020.4104627766599598No Hit
CATAGACACCATGCCTGGCTAATTTTTGTATTTTTAGTAGAGACAGGGTT1010.40643863179074446No Hit
CATAGATGCCCTTTTTGTGTACTTCCACTGACGACATGGTTCTACACATA960.38631790744466804No Hit
CATAGACAGAAACCACCCAGACAACCTGATTGGCCATTTGAACTCTATGA840.3380281690140845No Hit
CATAGAGAGATTTTGGGCTGAGACGATGCATGGTACTGGTACCAAAACAG790.3179074446680081No Hit
CATAGAGAGATTTTGGGCTGAGACGATGGCGTATTCTAAATATACAATCA770.30985915492957744No Hit
CATAGATGTCAAGAGTCTAATTCCTGCTCTGTTATTCAAAGGTTTTCTGC770.30985915492957744No Hit
CATAGAGAGATTTTGGGCTGAGACGATGGGGTTCTCTAAATATACACTCA770.30985915492957744No Hit
CATAGACAGGGAGGCGTATAAGTGATGACTGGTTCTACACATACTCAGGA720.289738430583501No Hit
CATAGACAGGGAGGCGTATAAGTGATGACACTGACTGATACAGGAAGGCC710.2857142857142857No Hit
CATAGAAAACAGAGTCACAGTCCCCAGTACACTGACGACATGGTTCTACA690.2776659959758551No Hit
CATAGATCATGGGACTTCAGCATGGCATATCTATGAGACCAAGTCTCTGC670.26961770623742454No Hit
CATAGAAAACAGAGTCACAGTCCCCAGTAATGTTAGCAATCCCCAGAAAT650.26156941649899396No Hit
CATAGAAAACAGAGTCACAGTCCCCAGTAATGTTAGTATCCCCAGAAATG600.2414486921529175No Hit
CATAGATCCCATCCAATAATAATGAGCAATGGGCAAGCAATGACAGTCTA600.2414486921529175No Hit
CATAGAGCTGGCTTCCTAACTTCCAAACAATGGGCAAGCAATGACAGTCT590.23742454728370221No Hit
CATAGAGAGATTTTGGGCTGAGACGATGGGGTTTTCTAGATATACAATCA570.22937625754527163No Hit
CATAGATTTGTAAATTGCCTAGTCTTGCATACACTGACTGATACAGGAAG570.22937625754527163No Hit
CATAGATCATGGGACTTCAGCATGGCCAACATGGTGAAACCCCATCTCTA550.22132796780684103No Hit
CATAGAACTTCACAAGGGCTTTAGGGGCTATACGTGAATGTGGATCAGAA510.2052313883299799No Hit
CATAGATCATGGGACTTCAGCATGGCCGACATGGCGAAACCCTATCTCTA500.2012072434607646No Hit
CATAGAGCAACAGGGACTCTCATTCAACTTGGTCTCATAGAATCCTTTCC480.19315895372233402No Hit
CATAGAAAACAGAGTCACAGTCCCCAGTGTACAAGCAATGGGGAAAGGAT480.19315895372233402No Hit
CATAGATCCCATCCAATAATAATGAGCAAGCAATGACAGTCTATGAGACC460.1851106639839034No Hit
CATAGATCATGGGACTTCAGCATGGCTACACATGGCTATGCAATCTATGA440.17706237424547283No Hit
CATAGATGTCAAGAGTCTAATTCCTGCTCCGTAAGCAGAATTACCTCTGG430.17303822937625754No Hit
CATAGATTTGTAAATTGCCTAGTCTTGCACAGATCATTTAAGCTCAATCT420.16901408450704225No Hit
CATAGATTGGAACTTTGCCAGCCTTAACATGGAGGAACCCCGTCTCTACT420.16901408450704225No Hit
CATAGATGTCCATCATGTGGAAGCTGCACTGACGACATGCTTCCTTCTGC400.16096579476861167No Hit
CATAGAGAGATTTTGGGCTGAGACAATAATGCCGCATATCTACAACTATC400.16096579476861167No Hit
CATAGAACTTCACAAGGGCTTTAGGGCTACACATGGCTATGCAATCTATG390.15694164989939638No Hit
CATAGATCCCATCCAATAATAATGAGCAAGCAATGACAGTCTATGAGACA380.1529175050301811No Hit
CATAGATGCCCTTTTTGTGTGCTTCTTTCAAAAGTCTGGTCTATGAGACC360.1448692152917505No Hit
CATAGAGCGATTTTGGGCTGAGACGATGGGGTTTTCTAGATATACACTCA330.1327967806841046No Hit
CATAGAGAGATTTTGGGCTGAGACAATGGGGTTTTCTAGATATACACTCA330.1327967806841046No Hit
CATAGAGAGATTTTGGGCTGAGACGAGTACAGCATGGTACTGGTACCAAA330.1327967806841046No Hit
CATAGAACTTCACAAGGGCTTTAGAGGCTACACATGGCTATGCAATCTAT320.12877263581488935No Hit
CATAGAGAGATTTTGGGCTGAGACGATGGGGTTTTCTAAATATACAATCA320.12877263581488935No Hit
CATAGACCTTTGGGTTCATATCATCTGGCTACACATGGCTATGCAATCTA310.12474849094567404No Hit
CATAGACACCATGCCTGGCTAATTTTAAAATTAGTACCTATAATCTCAGC310.12474849094567404No Hit
CATAGAGCTGGCTTCCTAACTTCCAACAATGGGCAAGCAATGACAGTCTA300.12072434607645875No Hit
CATAGAGATGTTTGATAAGCAGGGTGAATCCCCATCTCTACTAAAAATAC290.11670020120724345No Hit
CATAGATGCCCTTTTTGTGTACTTCCACACTGACGTCATGGTTCTACACA270.10865191146881288No Hit
CATAGATCATGGGACTTCAGCATGGCCAATATGGTGAAACCCTGTCTCTA260.10462776659959758No Hit
CATAGAAAACAGAGTCACAGTCCCCAGAAATGTTAGCATGTCTATATCCC250.1006036217303823No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)