FastQCFastQC Report
Wed 28 Jun 2023
EGAF00005804578

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005804578
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences66573
Sequences flagged as poor quality0
Sequence length150
%GC43

[WARN]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
CATAGATCATGGGACTTCAGCATGGCGGTGTTTGCAGATTTGGACCTGCG1876928.193111321406576No Hit
CATAGATCACCCAGCCCATATTGCACATCTACAAGGACACTCATCTATGA35875.388070238685353No Hit
CATAGAGGCAGGTGGGTAGTGGAAGGTGCAGCAACAAAAGTCACTCCTCT23073.4653688432247307No Hit
CATAGAGTCTGGAGGAAGGTGTCAGCCTCCAGACTCAACCCTTCTATGAG20493.077824343202199No Hit
CATAGAAGTGACCCTCAGCTCAGTGAAACAAGATCGTGCCTCTATGAGAC16432.467967494329533No Hit
CATAGATCGGTAAGGAATTTGGCTAGAGGACACTTTGGACTCTGCCTCTA12841.9287098373214364No Hit
CATAGATGGAAATTTTTGGCCAGGCGCAGTGGCTCACACCTATAATCCCA11631.7469544710317995No Hit
CATAGAAGGAGCTGGACTGGATGGACTACAAGTACCCACCACCTCTATGA11311.698886936145284No Hit
CATAGAGGCAGGTGGGTAGTGGAAGGTGTCAGCCTCCAGACTCAACCCTT10551.5847265407898097No Hit
CATAGATGGAAATTTTTGGCCAGGCGCGGTGGCTCACACCTATAATCCCA10381.5591906628813483No Hit
CATAGAGGATCCCCTGACATTTTGGTTGCCTTTCCTCAGTTCTTTTTCTA9071.3624141919396753No Hit
CATAGATGCCTCAAAGAGCTGAAGACAGCCGCTCACCTCTATGAGACCAA8531.2813002268186804No Hit
CATAGATGGAAATTTTTGGCCAGGCGTGGTGGCTCACACCTATAATCCCA7701.1566250582067805No Hit
CATAGAATACAACACACTCTCTGCCCTGTTCACTCTGATGGTACTTCTAT7611.143106064019948No Hit
CATAGAACAGTAAGTCAGCTCCTCCTTGGAGAGAAATGCTGCTCTATGAG7331.101046970994247No Hit
CATAGATGCCTCAAAGAGCTGGAGACAGCCGCTCACCTCTATGAGACCAA6450.9688612500563292No Hit
CATAGAACAGTCAAATCTCCGAGTAAACAGAATTTGCAAATACAGAATCA6430.965857029125922No Hit
CATAGAACAGTCAAATCTCCGAGTAAACAGAACAGCTAAAAATCTTGGAG5740.8622114070268727No Hit
CATAGATCACCCAGCCCATATTGCACAACTGGCATCTGGTGATCTATGAG5320.799122767488321No Hit
CATAGAAATCTGCAACAATATCATTCTCCTCTAACTTCATAGCACATCAT3200.48067534886515556No Hit
CATAGAAATCTGCAACAATATCATTCTCCTCCCTCATTATCCCTGTGCCT3140.4716626860739339No Hit
CATAGAGGCAGGTGGGTGGTGGAGGGCTTTGCTGTTTCTATGAGACCAAG2900.43561203490904726No Hit
CATAGACCACCGTGCCCAGATAAGTTTTGTAGTTTTGGTAGAGACAGGGT2620.3935529418833461No Hit
CATAGATGTGCCACATACCTTTCCCAGGACACTTTGGACTCTGCCTCTAT2580.38754450002253166No Hit
CATAGAGCAGCCATAGATAATTAATACACTTCTACAAGGACACTTTGGAC2500.37552761630090276No Hit
CATAGAGGCAGGTGGGTAGTGGAAGGCTTTGCTGTTTCTATGAGACCAAG2440.3665149535096811No Hit
CATAGATCACCCAGCCCATATTGCACATCTACAAGGACACTTTGGACTCT2380.35750229071845946No Hit
CATAGAAGGAGCTGGACTGGATGGACTGGTGGAGGGCTTTGCTGTTTCTA2350.3529959593228486No Hit
CATAGAGGCAGGTGGGTAGTGGAAGGGTAATGGAGGAGTATGGGATCTAT2340.35149384885764495No Hit
CATAGAAATCTGCAACAATATCATTCTCCTCTTCTGTTTACTCATGTCTC2330.3499917383924414No Hit
CATAGAACAGTAAGTCAGCTCCTCCTCTAACTTCATAGCACATCATGTCT2330.3499917383924414No Hit
CATAGATGCTTCTGATATGTTGCCGTACACTGACGACATGGTTCTACACA2320.34848962792723776No Hit
CATAGACCACCGTGCCCAGATAAGTTTTGTATTTTTGGTAGAGACAGGGT2250.3379748546708125No Hit
CATAGAAATCTGCAACAATATCATTCTCCTCCATAGAACAGCTAAAAATC2200.33046430234479446No Hit
CATAGAGAACAGCCCTGAGAGAATGCTGACGACATGGTTCTACACATAGA2090.3139410872275547No Hit
CATAGAATACAACACACTCTCTGCCCTGCACATCTACAAGGACACTCATC2090.3139410872275547No Hit
CATAGACAGCTGGGGTGGGAGGTTAGGGTGGGGAAAGAGAGCACTCTATG2060.30943475583194385No Hit
CATAGATCACTTGACTACAGAAAAAGGTCTACACTGACGACATGGTTCTA1920.2884052093190933No Hit
CATAGAAATCTGCAACAATATCATTCTCCTCTGGGGGCTCTATGGGTCAT1810.2718819942018536No Hit
CATAGAACAGTCAAATCTCCGAGTAAACAGAACATTAGCTTAGTTAATTA1790.2688777732714464No Hit
CATAGAAGGAGCTGGACTGGATGGACCTGGAAGCCATTATCCTAAGCAAA1780.2673756628062428No Hit
CATAGACTCTGTTTTGCTACCTGGGGTGGGGAAAGAGAGCACTCTATGAG1760.26437144187583556No Hit
CATAGAAATCTGCAACAATATCATTCTCCTCTGGGGGCTCTATGAGACCA1730.2598651104802247No Hit
CATAGAACAGTCAAATCTCCGAGTAAACAGAAGCAAACTAACACAGAAAC1620.243341895362985No Hit
CATAGACAGCTGGGGTGGGAGGTTAGCTTGAGCCTTTAGCCAATTGTTTA1620.243341895362985No Hit
CATAGAGGCAGGTGGGTAGTGGAAGGGTGGGGAAAGAGAGCACTCTATGA1600.24033767443257778No Hit
CATAGAAGGAGCTGGACTGGATGGACCTAGAGGCTATTACACTTAGCAAA1560.23432923257176333No Hit
CATAGAGCCTCCACTCTTCTCGCTATCGTAGCCTGTTCACTCTGATGGTA1470.22081023838493083No Hit
CATAGACCCCATGTGCAGTGTAAGCTCTCCCTCATTATCCCTGTGCCTCT1400.21029546512850555No Hit
CATAGATGCTTCTGATATGTTGCCGTATAGATGCTCAGATCTCAAAAGGC1380.20729124419809833No Hit
CATAGAGAACAGCCCTGAGAGAATGCTCAGATCTCAAAAGGCTTCTATGA1380.20729124419809833No Hit
CATAGACCTGTGTGTGAGGCATTGTTGGTAGAGACAGGGTTTCACTCTAT1380.20729124419809833No Hit
CATAGACTAATAGCCTCCCAAAGATTCCTACACTGACGACATGTGTGAGA1370.2057891337328947No Hit
CATAGATGCTTCTGATATGTTGCCGTAGGCTGAGAAAGGAGGATCACTCT1340.20128280233728388No Hit
CATAGAAGAGTGTGCTGTGTCTTCCGTAACTCTCAGTTGTGTGTGTGGTC1330.19978069187208025No Hit
CATAGATGTGGTCTCAGTGCCCTATGCACACGCACAACTGGCATCTGGTG1220.18325747675484055No Hit
CATAGACTCTGTTTTGCTACCTGGGGGGGTCATTCTTCTCTGGGGGCTCT1210.18175536628963695No Hit
CATAGAGAACAGCCCTGAGAGAATGCACATAGAGAACAGCTAAAAATCTT1200.18025325582443333No Hit
CATAGATGTGGTCTCAGTGCCCTATGACAGTGAAACAAGATCGTGCCTCT1200.18025325582443333No Hit
CATAGACGGGCCAGAGAATAGTGCTAGAAACTCCCATCTATGAGACCAAA1150.17274270349841525No Hit
CATAGATGCTTCTGATATGTTGCCGTACAGGTGCAAATTGTCAGTGTGTC1140.17124059303321165No Hit
CATAGACCACCGTGCCCAGATAAGTTGCCTTTCCTCAGTTCTTTTTCTAT1110.16673426163760083No Hit
CATAGATTTGTGTGAGAAGGAGCAAGACCAAAGCTAGAAACTCCCATCTA1100.16523215117239723No Hit
CATAGATGTGCCACATACCTTTCCCATCATCTTCCACTTGCCTACAGGTG1090.1637300407071936No Hit
CATAGAGCTTTAAGACCTGTCAGTGACCCTCAGCACAGTGAAACAAGATC1090.1637300407071936No Hit
CATAGACCCCATGTGCAGTGTAAGCTACACTGACGACATGGTTCTACACA1080.16222793024199No Hit
CATAGAAGTGACCCTCAGCTCAGTGAGTACAGCACAGATCCATGTTGGAA1070.16072581977678638No Hit
CATAGAACAGTAAGTCAGCTCCTCCTTCTGGGTTCACACCATTCTCCTGC1060.15922370931158278No Hit
CATAGATCGGTAAGGAATTTGGCTAGAGGAAAACAATTAGAAAACGAGGA1050.15772159884637915No Hit
CATAGATGGAAATTTTTGGCCAGGCGCGATGGCTCACACCTATAATCCCA1030.15471737791597193No Hit
CATAGACCACCGTGCCCAGATAAGTTTTGGTACTTTTGGTAGAGACAGGG1010.15171315698556473No Hit
CATAGACTCTGTTTTGCTACCTGGGGTGGAGACAGCCGCTCACCTCTATG1010.15171315698556473No Hit
CATAGAACAGTCAAATCTCCGAGTAAACAGAAAAGCAAACTAACACAGAA980.1472068255899539No Hit
CATAGAAGGAGCTGGACTGGATGGACCTGGAAGCCATTAACCTCAGCAAA980.1472068255899539No Hit
CATAGAGCAGCCATAGATAATTAATACACTTCTACACTGACGACATGGTT980.1472068255899539No Hit
CATAGACCACCGTGCCCAGATAAGTTTTTTGTATTTTTGGTAGAGACAGG920.1381941627987322No Hit
CATAGAAGTGACCCTCAGCTCAGTGAAACAAGATCGTGCCTCTTGTAGAA910.1366920523335286No Hit
CATAGATCACCCAGCCCATATTGCACACACGGACTACAAGTACCCACCAC900.135189941868325No Hit
CATAGAAATCTGCAACAATATCATTCTCCTCTATGAGACCAAAGCTAGAA890.1336878314031214No Hit
CATAGATCATGGGACTTCAGCATGGCGGTGTCTGCAGATTTGGACCTGCG870.13068361047271418No Hit
CATAGATGCTTCTGATATGTTGCCGTTGGTTCTACACATAGAGTCTGGAG850.12767938954230695No Hit
CATAGAATACAACACACTCTCTGCCCTGTGCCTCTTGTAGAAGGGATGGT850.12767938954230695No Hit
CATAGATGCTTCTGATATGTTGCCGTAGGACACTTTGGACTCTGCCTCTA840.12617727907710333No Hit
CATAGATCATGGGACTTCAGCATGGCGGTGCTTGCAGATTTGGACCTGCG830.12467516861189973No Hit
CATAGAACAGTCAAATCTCCGAGTAAACAGAAAGCAAACTAACACAGAAA830.12467516861189973No Hit
CATAGACCCCATGTGCAGTGTAAGCTGAGAAAGGAGGATCACTCTATGAG830.12467516861189973No Hit
CATAGAAGTGACCCTCAGCTCAGTGAGGGTGGGGAAAGAGAGCACTCTAT820.1231730581466961No Hit
CATAGACTAATAGCCTCCCAAAGATTCCTTAGGAGAGGAGGGGGCAGAAT810.1216709476814925No Hit
CATAGAGAACAGCCCTGAGAGAATGCTACACATAGAGAACAGCTAAAAAT800.12016883721628889No Hit
CATAGAGCTTTAAGACCTGTCAGTGACCCTCAGTCCAGTGAACTCAAGGG800.12016883721628889No Hit
CATAGAACAGTCAAATCTCCGAGTAAACAGAAAACCGGAGAGGAGGGGGC780.11716461628588166No Hit
AATAGATCATGGGACTTCAGCATGGCGGTGTTTGCAGATTTGGACCTGCG780.11716461628588166No Hit
CATAGAACAGTCAAATCTCCGAGTAAACAGTGAAACAAGATCGTGCCTCT770.11566250582067804No Hit
CATAGATCATGGGACTTCAGCATGGCGGTGTTCGCAGATTTGGACCTGCG770.11566250582067804No Hit
CATAGATGGAAATTTTTGGCCAGGCGCTGTGGCTCACACCTATAATCCCA750.11265828489027083No Hit
CATAGACCACCGTGCCCAGATAAGTTTTTGTATTTTTGGTAGAGACAGGG750.11265828489027083No Hit
CATAGATGCCTCAAAGAGCTGAAGACATGGTGGAGGGCTTTGCTGTTTCT750.11265828489027083No Hit
CATAGAGAACAGCCCTGAGAGAATGGTTCTACACATAGAGAACAGCTAAA740.11115617442506723No Hit
CATAGACTCTGTTTTGCTACCTGGGGGGTGGGGCGGCTGAGAAAGGAGGA740.11115617442506723No Hit
CATAGATCATGGGACTTCAGCATGGCGGTGTTTGCGGATTTGGACCTGCG740.11115617442506723No Hit
CATAGATCATGGGACTTCAGCATGGCACATGTATACATATGTAACCTGCA730.1096540639598636No Hit
CATAGATCATGGGACTTCAGCATGGCGGTGTTTGCAGATTTGGGCCTGCG730.1096540639598636No Hit
CATAGATCATGGGACTTCAGCATGGTGGTGTTTGCAGATTTGGACCTGCG710.10664984302945638No Hit
CATAGATGCCTCAAAGAGCTGAAGACAGTGAAACAAGATCGTGCCTCTAT690.10364562209904916No Hit
CATAGATGCTTCTGATATGTTGCCGTTGCCTTTCCTCAGTTCTTTTTCTA670.10064140116864194No Hit
CATAGACCCTCCTATCCCTTTTCCCCTCTATGAGAACATTAGCTTAGTTA670.10064140116864194No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)