FastQCFastQC Report
Wed 28 Jun 2023
EGAF00005804579

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005804579
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences66573
Sequences flagged as poor quality0
Sequence length150
%GC42

[FAIL]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
CATAGAGGTGAGCGGCTGTCTCCACAAGTCCGCGCAGAGCCTTCAGGTCA1892228.42293422258273No Hit
CATAGATGAGTGTCCTTGTAGATGTGCAATATGGGCTGGGTGATCTATGT36115.42412088985024No Hit
CATAGAGGAGTGACTTTTGTTGCTGCACCTTCCACTACCCACCTGCCTCT23363.5089300467156352No Hit
CATAGAAGGGTTGAGTCTGGAGGCTGACACCTTCCTCCAGACTCTATGTG20503.0793264536674023No Hit
CATAGAGGCACGATCTTGTTTCACTGAGCTGAGGGTCACTTCTATGTGTA16322.4514442792122932No Hit
CATAGAGGCAGAGTCCAAAGTGTCCTCTAGCCAAATTCCTTACCGATCTA12941.9437309419734725No Hit
CATAGATGGGATTATAGGTGTGAGCCACTGCGCCTGGCCAAAAATTTCCA11991.8010304477791297No Hit
CATAGAGGTGGTGGGTACTTGTAGTCCATCCAGTCCAGCTCCTTCTATGT11301.6973848256800805No Hit
CATAGATGGGATTATAGGTGTGAGCCACCGCGCCTGGCCAAAAATTTCCA10791.6207771919546963No Hit
CATAGAAGGGTTGAGTCTGGAGGCTGACACCTTCCACTACCCACCTGCCT10751.6147687500938819No Hit
CATAGAAAAAGAACTGAGGAAAGGCAACCAAAATGTCAGGGGATCCTCTA9011.3534015291484536No Hit
CATAGAGGTGAGCGGCTGTCTTCAGCTCTTTGAGGCATCTATGTGTAGAA8521.2797981163534766No Hit
CATAGATGGGATTATAGGTGTGAGCCACCACGCCTGGCCAAAAATTTCCA7851.1791567151848348No Hit
CATAGAAGTACCATCAGAGTGAACAGGGCAGAGAGTGTGTTGTATTCTAT7551.1340934012287263No Hit
CATAGAGCAGCATTTCTCTCCAAGGAGGAGCTGACTTACTGTTCTATGTG7331.101046970994247No Hit
CATAGAGGTGAGCGGCTGTCTCCAGCTCTTTGAGGCATCTATGTGTAGAA6630.9958992384299941No Hit
CATAGATCACTGATTCTGTATTTGCAAATTCTGTTTACTCGGAGATTTGA6380.9583464767999039No Hit
CATAGAGCTCCAAGATTTTTAGCTGTTCTGTTTACTCGGAGATTTGACTG5720.8592071860964655No Hit
CATAGATCACCAGATGCCAGTTGTGCAATATGGGCTGGGTGATCTATGTG5330.8006248779535248No Hit
CATAGAGCTCCAAGATTTTTAGCTGTTCTCTATGTGTAGAACCATGTCGT4930.7405404593453803No Hit
CATAGACATGATGTGCTATGAAGTTAGAGGAGAATGATATTGTTGCAGAT3110.46715635467832306No Hit
CATAGAGGCACAGGGATAATGAGGGAGGAGAATGATATTGTTGCAGATTT3070.4611479128175086No Hit
CATAGAAACAGCAAAGCCCTCCACCACCCACCTGCCTCTATGTGTAGAAC2960.4446246977002689No Hit
CATAGAGTGAAACCCTGTCTCTACCAAAACTACAAAACTTATCTGGGCAC2690.4040677151397714No Hit
CATAGAGGCAGAGTCCAAAGTGTCCTGGGAAAGGTATGTGGCACATCTAT2610.3920508314181425No Hit
CATAGAAACAGCAAAGCCTTCCACTACCCACCTGCCTCTATGTGTAGAAC2470.3710212849052919No Hit
CATAGAGGCAGAGTCCAAAGTGTCCTTGTAGAAGTGTATTAATTATCTAT2460.36951917444008836No Hit
CATAGAGGCAGAGTCCAAAGTGTCCTTGTAGATGTGCAATATGGGCTGGG2430.36501284304447745No Hit
CATAGATCCCATACTCCTCCATTACCCTTCCACTACCCACCTGCCTCTAT2370.35600018025325586No Hit
CATAGAAACAGCAAAGCCCTCCACCAGTCCATCCAGTCCAGCTCCTTCTA2350.3529959593228486No Hit
CATAGAGTGAAACCCTGTCTCTACCAAAAATACAAAACTTATCTGGGCAC2250.3379748546708125No Hit
CATAGACATGATGTGCTATGAAGTTAGAGGAGGAGCTGACTTACTGTTCT2250.3379748546708125No Hit
CATAGATGAGTGTCCTTGTAGATGTGCAGGGCAGAGAGTGTGTTGTATTC2120.31844741862316556No Hit
CATAGAGTGCTCTCTTTCCCCACCCTAACCTCCCACCCCAGCTGTCTATG2070.3109368662971475No Hit
CATAGAGCTCCAAGATTTTTAGCTGTTCTATGGAGGAGAATGATATTGTT2070.3109368662971475No Hit
CATAGACCACACACACAACTGAGAGTTTTTTTTGTGAGATAAAAACTGTT2010.3019242035059258No Hit
CATAGATCTCCCTAATTAACTAAGCTAATGTTCTGTTTACTCGGAGATTT1810.2718819942018536No Hit
CATAGATCTCCCTAATTAACTAAGCTAATGTTCTCATTCTATAGATCATA1800.27037988373665No Hit
CATAGAGGTTTTCTGTTTCTGTGTTAGTTTGCTTAGGATAATGGCTTCCA1770.26587355234103915No Hit
CATAGAGTGCTCTCTTTCCCCACCCCAGGTAGCAAAACAGAGTCTATGTG1750.2628693314106319No Hit
CATAGAGCCCCCAGAGAAGAATGACCCATAGAGCCCCCAGAGGAGAATGA1730.2598651104802247No Hit
CATAGAGTGCTCTCTTTCCCCACCCTTCCACTACCCACCTGCCTCTATGT1640.2463461162933922No Hit
CATAGAGGTTTTCTGTTTCTGTGTTAGTTTGCTAAGTGTAATAGCCTCTA1620.243341895362985No Hit
CATAGAGGTTTTCTGTTTCTGTGTTAGTTTGCTTCTGTTTACTCGGAGAT1590.23883556396737415No Hit
CATAGAAGTACCATCAGAGTGAACAGGCTACGATAGCGAGAAGAGTGGAG1490.22381445931533805No Hit
CATAGAAGCCTTTTGAGATCTGAGCATTCTCTCAGGGCTGTTCTCTATGT1450.21780601745452363No Hit
CATAGAGTGAAACCCTGTCTCTACCAACAATGCCTCACACACAGGTCTAT1450.21780601745452363No Hit
CATAGAAGCCTTTTGAGATCTGAGCATCTATACGGCAACATATCAGAAGC1420.21329968605891275No Hit
CATAGAGGCACAGGGATAATGAGGGAGAGCTTACACTGCACATGGGGTCT1410.21179757559370918No Hit
CATAGAGTGATCCTCCTTTCTCAGCCTACGGCAACATATCAGAAGCATCT1390.20879335466330193No Hit
CATAGAGTCCTTCCCTCTCACACATGTCGTCAGTGTAGGAATCTTTGGGA1360.2042870232676911No Hit
CATAGACCACACACACAACTGAGAGTTACGGAAGACACAGCACACTCTTC1320.19827858140687668No Hit
CATAGAGCCCCCAGAGAAGAATGACCCCCCCAGGTAGCAAAACAGAGTCT1230.18475958722004418No Hit
CATAGAGGCACGATCTTGTTTCACTGTCATAGGGCACTGAGACCACATCT1210.18175536628963695No Hit
CATAGAGCTCCAAGATTTTTAGCTGTTCTCTATGTGCATTCTCTCAGGGC1210.18175536628963695No Hit
CATAGAGGCACGATCTTGTTTCACTGTGCTGAGGGTCACTGACAGGTCTT1150.17274270349841525No Hit
CATAGAGTGATCCTCCTTTCTCAGCCTTCCAACATGGATCTGTGCTGTAC1140.17124059303321165No Hit
CATAGATGGGAGTTTCTAGCTTTGGTCTCATAGATGGGAGTTTCTAGCAC1130.16973848256800805No Hit
CATAGATGGGAGTTTCTAGCTTTGGTCTTGCTCCTTCTCACACAAATCTA1120.16823637210280445No Hit
CATAGATCACCAGATGCCAGTTGTGCGTGTGCATAGGGCACTGAGACCAC1120.16823637210280445No Hit
CATAGACACACTGACAATTTGCACCTGTACGGCAACATATCAGAAGCATC1110.16673426163760083No Hit
CATAGACCATCCCTTCTACAAGAGGCATCTATGTGTAGAACCATGTCGTC1110.16673426163760083No Hit
CATAGAAAAAGAACTGAGGAAAGGCAACTTATCTGGGCACGGTGGTCTAT1090.1637300407071936No Hit
CATAGAGGCACGATCTTGTTTCACTGTAACCTCTGCTTCCCAGGTTCAAG1060.15922370931158278No Hit
CATAGAGGTGGTGGGTACTTGTAGTCCCAGCTACTCGAGAGGCTGAGGCA1060.15922370931158278No Hit
CATAGAGGTGAGCGGCTGTCTCCACCCCAGGTAGCAAAACAGAGTCTATG1020.15321526745076833No Hit
CATAGATCACCAGATGCCAGTTGTGCCCCCCATATCATTGTGATCCTACC1010.15171315698556473No Hit
CATAGAGTGAAACCCTGTCTCTACCAAAAGTACCAAAACTTATCTGGGCA1000.15021104652036113No Hit
CATAGATGGGATTATAGGTGTGAGCCATCGCGCCTGGCCAAAAATTTCCA990.1487089360551575No Hit
CATAGAGGTTTTCTGTTTCTGTGTTAGTTTGCTGAGGTTAATGGCTTCCA990.1487089360551575No Hit
CATAGAGGTTTTCTGTTTCTGTGTTAGTTTGCTTTTCTGTTTACTCGGAG970.14570471512475028No Hit
CATAGAGTGAAACCCTGTCTCTACCAAAAATACAAAAAACTTATCTGGGC930.13969627326393583No Hit
CATAGACCATCCCTTCTACAAGAGGCACGATCTTGTTTCACTGAGCTGAG920.1381941627987322No Hit
CATAGAGGTGAGCGGCTGTCTCCACAAGTCCGCGCAGAGCCTTCAGGTCG910.1366920523335286No Hit
CATAGAGGTGGTGGGTACTTGTAGTCCGTGTGTGCAATATGGGCTGGGTG900.135189941868325No Hit
CATAGATGGGAGTTTCTAGCTTTGGTCTCATAGAGGAGAATGATATTGTT880.13218572093791778No Hit
CATAGATATTCTGCCCCCTCCTCTCCAGACTCTATGTGTAGAACCAACGG860.12918150000751055No Hit
CATAGACCATCCCTTCTACAAGAGGCACAGGGCAGAGAGTGTGTTGTATT850.12767938954230695No Hit
CATAGAGGCAGAGTCCAAAGTGTCCTACGGCAACATATCAGAAGCATCTA840.12617727907710333No Hit
CATAGAGTGATCCTCCTTTCTCAGCTTACACTGCACATGGGGTCTATGTG840.12617727907710333No Hit
CATAGATATTCTGCCCCCTCCTCTCCTAAGGAATCTTTGGGAGGCTATTA840.12617727907710333No Hit
CATAGAGTGCTCTCTTTCCCCACCCTCACTGAGCTGAGGGTCACTTCTAT830.12467516861189973No Hit
CATAGAGGTTTTCTGTTTCTGTGTTAGTTTGCTTTCTGTTTACTCGGAGA810.1216709476814925No Hit
CATAGACCATCCCTTCTACAAGAGGCAACATATCAGAAGCATCTATGTGT810.1216709476814925No Hit
CATAGACCCCCTTGAGTTCACTGGACTGAGGGTCACTGACAGGTCTTAAA800.12016883721628889No Hit
CATAGAGCTCCAAGATTTTTAGCTGTTCTCTATGTGTAGCATTCTCTCAG800.12016883721628889No Hit
CATAGAGTGATCCTCCTTTCTCAGCCTCCCAAAGTGCTGGGATTACAGGC790.11866672675108529No Hit
CATAGAGTGAAACCCTGTCTCTACCAAAAATACAAAAACTTATCTGGGCA790.11866672675108529No Hit
CATAGATATTCTGCCCCCTCCTCTCCGGTTTTCTGTTTACTCGGAGATTT770.11566250582067804No Hit
CATAGAGGCACGATCTTGTTTCACTGTTTACTCGGAGATTTGACTGTTCT760.11416039535547444No Hit
CATAGAAACAGCAAAGCCCTCCACCATGTCTTCAGCTCTTTGAGGCATCT760.11416039535547444No Hit
CATAGAGTGATCCTCCTTTCTCAGCCGCCCCACCCCCCAGGTAGCAAAAC740.11115617442506723No Hit
CATAGAGCTCCAAGATTTTTAGCTGTTCTCTATGTGTAGAACCATTCTCT740.11115617442506723No Hit
CATAGAGGCACGATCTTGTTTCACTGTCTTCAGCTCTTTGAGGCATCTAT720.10815195349466No Hit
CATAGAGCTCCAAGATTTTTAGCTGTTCTATGTGTAGAACCATGTCGTCA720.10815195349466No Hit
CATAGATGGGATTATAGGTGTGAGCCACAGCGCCTGGCCAAAAATTTCCA710.10664984302945638No Hit
CATAGAGGTGAGCGGCTGTCTCCACAAGTCCGCGCAGAGCCTTCGGGTCA700.10514773256425278No Hit
CATAGAGGTGAGCGGCTGTCTCCACGAGTCCGCGCAGAGCCTTCAGGTCA700.10514773256425278No Hit
CATAGACGAAATGTACAGGTTGCTAAGTTTTAGGGTACATGTGCACATTG690.10364562209904916No Hit
CATAGAGGTGAGCGGCTGTCTCCACAAGTCCGCGCGGAGCCTTCAGGTCA670.10064140116864194No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)