FastQCFastQC Report
Wed 28 Jun 2023
EGAF00005804581

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005804581
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences643660
Sequences flagged as poor quality0
Sequence length150
%GC40

[WARN]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
CATAGAGGTGAGCGGCTGTCTCCACAAGTCCGCGCAGAGCCTTCAGGTCA6474710.059192741509493No Hit
CATAGATCCAGCTTCATCCATGTCCCGTGGTGTGCAAATTCTCTATGTGT546508.490507410744803No Hit
CATAGAAAGGGACAAGGGCTCACTCTAGCCTGGGAGACATCTATGTGTAG417906.492558182891589No Hit
CATAGAACCAACCCTGATTCTGCTGCTCACTCTTTGGGTTCTATGTGTAG301254.680265978932977No Hit
CATAGAACAATCAGGCACCCACCATGCTGAAGTCCCATGATCTATGTGTA227513.5346300842059475No Hit
CATAGATCTCAAACAGCCTCTCCCAGGAAAGTTGGAACCTATCAGTGTCT209183.249852406550042No Hit
CATAGATCAAGGTGTGAGCATGGTCCCGTGGTGTGCAAATTCTCTATGTG163802.5448218003293666No Hit
CATAGATGAAAGAGCATTGGTTGTAACACCGAAAAACACCCTCTATGTGT140552.183606251747817No Hit
CATAGATGTTGTTGTTCTGTTGCCCAATATGAACAGAAAGAAGCTCTATG134402.0880589130907623No Hit
CATAGAGTTCTCACTCTCCGCTAATTCTGTGTGGCCAACAGGAAGGTCTA123391.917005872665693No Hit
CATAGAGCCATCATCATTTCTCACCCAGGAAAGTTGGAACCTATCAGTGT109931.7078892583040735No Hit
CATAGATGTTGTTGTTCTGTTCCCCAATATGAACAGAAAGAAGCTCTATG103971.6152937886461796No Hit
CATAGATCTCAAACAGCCTCTCCCAGGGTAATTCTGGCCTTGTTCTATGT103091.6016219743342757No Hit
CATAGATGAAAGAGCATTGGTTGTGACACCGAAAAACACCCTCTATGTGT97421.5135319889382592No Hit
CATAGATGTTGTTGTTCTGTTGCCCATGTCGTCAGTGTAGAAGCTTTGAG95531.4841686604729205No Hit
CATAGATCCCTGGCAAGAATTCCTCTTCTTCCTCCTCCTGTCTATGTGTA83411.2958704906317No Hit
CATAGAGATCTTCTCGGCTTAGCGGCCATTGTCGCCTTCTCTTCTCTATG68951.071217723642917No Hit
CATAGAGCCATCATCATTTCTCACCCAGGGTAATTCTGGCCTTGTTCTAT61880.9613771245688718No Hit
CATAGACAAGCCTGCCAAGACCTCTCTACGGAGGCTGAAACTCTAAGGGT58020.901407575428021No Hit
CATAGATAGCAGCAATCTCAGGCCTGGGAGACCCCATATCTACCAAAGAT57980.9007861293229344No Hit
CATAGATCCAGCTTCATCCATGTCCCGTGGTGTGCAAAATTCTCTTGACA56880.8836963614330549No Hit
CATAGAAAGGGACAAGGGCTCACTCTGCTGCTCACTCTTTGGGTTCTATG47120.7320635117919398No Hit
CATAGAACAATCAGGCACCCACCATGTCGTCAGTGTAGTATGCAGTCTGT46580.7236739893732717No Hit
CATAGAAAGGGACAAGGGCTCACTCTTTGGGTTCTATGTGTAGAACCATG44010.6837460771214616No Hit
CATAGAACTGAAACTAGGAAACATGTCTGAGGTTTCCTGGGCATCAAGTC43140.6702296243358294No Hit
CATAGAGCCATCATCATTTCTCACCCAGAAGCTTTGAGATTTGTGTCTGT42460.6596650405493584No Hit
CATAGAACAATCAGGCACCCACCATGTCAGTATGCAGTCTGTGAGCTGTC41410.6433520802908368No Hit
CATAGATGGTAAGATGACATAGTGAAGAGTCAGTGTAGAAGCTTTGAGAT39630.6156977286144859No Hit
CATAGAACAATCAGGCACCCACCATGTCGTCAGTGTAGAAGCTTTGAGAT33720.5238790665879501No Hit
CATAGAACAATCAGGCACCCACCATGTCGTCAGTGTACCAAAAGCACAAG31600.49094242301836377No Hit
CATAGATCTCAAACAGCCTCTCCCAGAAGCTTTGAGATTTGTGTCTGTTC28670.4454214958207749No Hit
CATAGAGCTAGATCTAATTCTGTATGAGCACAAGGGAGAATCACCAAAAG28010.4351676350868471No Hit
CATAGATCAAGGTGTGAGCATGGTCCCGTGGTGTGCAAAATTCTCTTGAC27890.4333032967715875No Hit
CATAGATGTTGTTGTTCTGTTGCCCAGGAAAGTTGGAACCTATCAGTGTC27140.4216511823012149No Hit
CATAGAAAGGGACAAGGGCGCACTCTAGCCTGGGAGACATCTATGTGTAG26460.41108659851474383No Hit
CATAGAAAGGGACAAGGGCTCACTCTCTGCTGCTCACTCTTTGGGTTCTA26350.40937762172575587No Hit
CATAGATGTTGTTGTTCTGTTGCCCAACCTGTGTATATTCTCCTGCATTC24130.37488736289345304No Hit
CATAGATGTTGTTGTTCTGTTGCCCACATAGAGGCAAGGGTACTATTTTG23300.36199235621290743No Hit
CATAGAACAATCAGGCACCCACCATGTCGTCAGTGTCAGGAAAGTTGGAA22260.3458347574806575No Hit
CATAGAGGTGTTTCTTATAGTCAACTGAAGTCACATAGAGGTTTCCTGGG22050.3425721654289532No Hit
CATAGAAAGGGACAAGGGCTCACTCTTTGGGTTCTGCTGCTCACTCTTTG21490.3338719199577417No Hit
CATAGAGGAAAGAACAACTGCGGACGGTCTCATAGAGGCAAGGGTACTAT21270.3304539663797657No Hit
CATAGAGCTAGATCTAATTCTGTATGAGCACAAGGGAGAATCTATGTGTA19550.30373178386104466No Hit
CATAGAGGCGAGCGGCTGTCTCCACAAGTCCGCGCAGAGCCTTCAGGTCA18430.28633129291862164No Hit
CATAGATCCAGCTTCATCCATGTCCCAGTGTCAGGAAAGTTGGAACCTAT17100.2656682099244943No Hit
CATAGATCAAGGTGTGAGCATGGTCCTCTGTGACACCGAAAAACACCCTC16380.25448218003293666No Hit
CATAGAAAGGGACAAGGGCTCACTCTTTGGGCTGCTGCTCACTCTTTGGG16240.2523071186651338No Hit
CATAGATCCAGCTTCATCCATGTCCCGATGCCCAGGAAAGTTGGAACCTA15100.2345959046701675No Hit
CATAGATGTTGTTGTTCTGTTGCCCACTCTTTGGGTTCTATGTGTAGAAC14890.23133331261846315No Hit
CATAGATCCAGCTTCATCCATGTCCCATTGTCGCCTTCTCTTCTCTATGT14720.2286921666718454No Hit
CATAGATCTAGCTTCATCCATGTCCCGTGGTGTGCAAATTCTCTATGTGT14720.2286921666718454No Hit
CATAGATCCAGCTTCATCCATGTCCCGTGGTGTGCAAATTCTCTATGTGC14280.2218562595158935No Hit
CATAGAACAATCAGGCACCCACCATGTGACACCGAAAAACACCCTCTATG12000.1864338315259609No Hit
CATAGATCCCTGGCAAGAATTCCTCAATATGAACAGAAAGAAGCTCTATG11520.1789764782649225No Hit
CATAGAGGAAAGAACAACTGCGGACGACTTGGTCTCATAGAGGCAAGGGT10980.17058695584625422No Hit
CATAGAAAGGGACAAGGGCTCACTCTAGCCTGGGAGACCCCATATCTACC10870.16887797905726626No Hit
CATAGATCTCAAACAGCCTCTCCCAGCTGTGTGGCCAACAGGAAGGTCTA10870.16887797905726626No Hit
CATAGAGGTGTTTCTTATAGTCAACTGAAGTACACTGAAACATTTTCTGG10820.1681011714259081No Hit
CATAGATCCAGCTTCATCCATGTCCCAGTGTAACCTGTGTATATTCTCCT10470.16266351800640091No Hit
CATAGATAGCAGCAATCTCAGGCCTCGTTCAGGGTAATTCTGGCCTTGTT10300.16002237205978312No Hit
CATAGATCCCTGGCAAGAATTCCCCAATATGAACAGAAAGAAGCTCTATG10130.15738122611316532No Hit
CATAGAACTGAAACTAGGAAACATGTCTGAGTGTAGGTAAACAAACTTCT10050.15613833390299225No Hit
CATAGAAAGGGACAAGGGCTCACTCTTCTGCTGCTCACTCTTTGGGTTCT9520.14790417301059566No Hit
CATAGATCCAGCTTCATCCATGTCCCAGTGTAGGTAAACAAACTTCTGGC9400.14603983469533605No Hit
CATAGATCCAGCTTCATCCATGTCCCAGGGTAATTCTGGCCTTGTTCTAT9290.14433085790634806No Hit
CATAGATAGCAGCAATCTCAGGCCTCCTCTTCTTCCTCCTCCTGTCTATG8990.13967001211819904No Hit
CATAGACACAACGTTTGAGACTGCCTGGGAGACCCCATATCTACCAAAGA8960.13920392753938415No Hit
CATAGATGTTGTTGTTCTGCTGCTCACTCTTTGGGTTCTATGTGTAGAAC8750.13594133548767984No Hit
CATAGAACAATCAGGCACCCACCATGTCGTCAGTGGCCATTGTCGCCTTC8330.1294161513842712No Hit
CATAGAGCTAGATCTAATTCTGTATGAGCACTCTAGCCTGGGAGACATCT7980.123978497964764No Hit
CATAGAACAATCAGGCACCCACCATGTCGTCAGTGTACTATGGCTTAATG7580.11776403691389865No Hit
CATAGAACTAACCCTGATTCTGCTGCTCACTCTTTGGGTTCTATGTGTAG7530.11698722928254048No Hit
CATAGAACAATCAGGCACCCACCATGTCGTCAGTGTAGGTAAACAAACTT7510.1166765062299972No Hit
CATAGAAAGGGACAAGGGCTCACTCTTTGGGTTCTATGCTGCTGCTCACT7300.11341391417829289No Hit
CATAGAGGTGTTTCTTATAGTCAACTGAAGTCCCGTGGTGTGCAAATTCT7150.11108349128421838No Hit
CATAGATCCAGCTTCATCCATGTCCCTCCTCTTCTTCCTCCTCCTGTCTA6640.10316005344436503No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)