FastQCFastQC Report
Wed 28 Jun 2023
EGAF00005804582

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005804582
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences112403
Sequences flagged as poor quality0
Sequence length150
%GC36

[OK]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
CATAGAACAGTCAAATCTCCGAGTAAACAGAACATTAGCTTAGTTAATTA106339.459711929396903No Hit
CATAGAACAGTCAAATCTCCGAGTAAACAGAATTTGCAAATACAGAATCA100778.965063210056671No Hit
CATAGAAATCTGCAACAATATCATTCTCCTCTAACTTCATAGCACATCAT94828.43571790788502No Hit
CATAGATCACCCAGCCCATATTGCACATCTACAAGGACACTCATCTATGA60135.349501347828794No Hit
CATAGATCATGGGACTTCAGCATGGCGGTGTTTGCAGATTTGGACCTGCG55344.923356138181365No Hit
CATAGAGTCTGGAGGAAGGTGTCAGCCTCCAGACTCAACCCTTCTATGAG52844.700942145672268No Hit
CATAGAGGATCCCCTGACATTTTGGTTGCCTTTCCTCAGTTCTTTTTCTA41463.6885136517708603No Hit
CATAGAATACAACACACTCTCTGCCCTGTTCACTCTGATGGTACTTCTAT40193.5755273435762387No Hit
CATAGAAATCTGCAACAATATCATTCTCCTCAGAACATTAGCTTAGTTAA32282.8718094712774573No Hit
CATAGAACAGTAAGTCAGCTCCTCCTTGGAGAGAAATGCTGCTCTATGAG30472.710781740700871No Hit
CATAGATCGGTAAGGAATTTGGCTAGAGGACACTTTGGACTCTGCCTCTA24542.1832157504692935No Hit
CATAGATGGAAATTTTTGGCCAGGCGCAGTGGCTCACACCTATAATCCCA19961.7757533161926284No Hit
CATAGAGCAGCCATAGATAATTAATACACTTCTCACATAGAACAGCTAAA19211.7090291184398994No Hit
CATAGATGGAAATTTTTGGCCAGGCGCGGTGGCTCACACCTATAATCCCA17751.5791393468145867No Hit
CATAGAGGCAGGTGGGTAGTGGAAGGTGCAGCAACAAAAGTCACTCCTCT15331.363842602065781No Hit
CATAGATGGAAATTTTTGGCCAGGCGTGGTGGCTCACACCTATAATCCCA12411.104063058815156No Hit
CATAGAGGCAGGTGGGTAGTGGAAGGGTAATGGAGGAGTATGGGATCTAT11701.0408974849425727No Hit
CATAGAAGTGACCCTCAGCTCAGTGAAACAAGATCGTGCCTCTATGAGAC8550.7606558543811108No Hit
CATAGAATACAACACACTCTCTGCCCTGCACATCTACAAGGACACTCATC7850.6983799364785637No Hit
CATAGATGCTTCTGATATGTTGCCGTATAGATGCTCAGATCTCAAAAGGC7740.6885937208081635No Hit
CATAGAGGCAGGTGGGTAGTGGAAGGTGTCAGCCTCCAGACTCAACCCTT7350.6538971379767444No Hit
CATAGATCACTTGACTACAGAAAAAGGTCTATGTAGAACAGCTAAAAATC7350.6538971379767444No Hit
CATAGAAGGAGCTGGACTGGATGGACTACAAGTACCCACCACCTCTATGA7330.6521178260366716No Hit
CATAGATGTGCCACATACCTTTCCCAGGACACTTTGGACTCTGCCTCTAT6240.5551453253027054No Hit
CATAGAGGCAGGTGGGTGGTGGAGGGCTTTGCTGTTTCTATGAGACCAAG6150.5471384215723779No Hit
CATAGATCACCCAGCCCATATTGCACAACTGGCATCTGGTGATCTATGAG5710.5079935588907769No Hit
CATAGACTAATAGCCTCCCAAAGATTCCTATAGACCAAAGCTAGAAACTC5670.5044349350106314No Hit
CATAGAGGCAGGTGGGTAGTGGAAGGGTGGGGAAAGAGAGCACTCTATGA5650.5026556230705587No Hit
CATAGAAATCTGCAACAATATCATTCTCCTCTTATGTTGCCTTTCCTCAG5390.47952456784961256No Hit
CATAGATTTGTGTGAGAAGGAGCAAGAACATTAGCTTAGTTAATTAGGGA5120.45550385665863014No Hit
CATAGAGGCAGGTGGGTAGTGGAAGGCTTTGCTGTTTCTATGAGACCAAG5060.4501659208384118No Hit
CATAGAAGTGACCCTCAGCTCAGTGAGAATTTGCAAATACAGAATCAGTG4670.4154693380069927No Hit
CATAGAACAGTAAGTCAGCTCCTCCTCTAACTTCATAGCACATCATGTCT4130.3674279156250278No Hit
CATAGACCTGTGTGTGAGGCATTGTTGCCTCTTGTAGAAGGGATGGTCTA3930.34963479622430005No Hit
CATAGACCACCGTGCCCAGATAAGTTTTGTAGTTTTGGTAGAGACAGGGT3670.326503741003354No Hit
CATAGAAATCTGCAACAATATCATTCTCCTCGAGGCAGAGGACAGGTATC3650.32472442906328125No Hit
CATAGACAGCTGGGGTGGGAGGTTAGGGTGGGGAAAGAGAGCACTCTATG3640.3238347730932449No Hit
CATAGACCACCGTGCCCAGATAAGTTTTGTATTTTTGGTAGAGACAGGGT3280.2918071581719349No Hit
CATAGATGCCTCAAAGAGCTGAAGACAGCCGCTCACCTCTATGAGACCAA3210.28557956638168025No Hit
CATAGACTAATAGCCTCCCAAAGATTCCTCATAGACCAAAGCTAGAAACT3030.26956575892102524No Hit
CATAGAACAGTCAAATCTCCGAGTAAACAGAAAGCAAACTAACACAGAAA3030.26956575892102524No Hit
CATAGACCTGTGTGTGAGGCATTGTTAGACATGTGTGAGAGGGAAGGACT3000.26689679101091607No Hit
CATAGAAATCTGCAACAATATCATTCTCCTCTATTGCAGCAACAAAAGTC3000.26689679101091607No Hit
CATAGAAGAGTGTGCTGTGTCTTCCGTGTGCACAACTGGCATCTGGTGAT2710.24109676787986084No Hit
CATAGATGCTTCTGATATGTTGCCGTAGCCTGTTCACTCTGATGGTACTT2630.23397952011956977No Hit
CATAGAGGCAGGTGGGTAGTGGAAGGACACTTTGGACTCTGCCTCTATGA2350.2090691529585509No Hit
CATAGAGCCTCCACTCTTCTCGCTATCGTATGCAGCAACAAAAGTCACTC2230.1983932813181143No Hit
CATAGACCACCGTGCCCAGATAAGTTTTGGTACTTTTGGTAGAGACAGGG2180.19394500146793234No Hit
CATAGAAATCTGCAACAATATCATTCTCCTCTATGCAGCAACAAAAGTCA2180.19394500146793234No Hit
CATAGAGAACAGCCCTGAGAGAATGCATAGAGAACAGCTAAAAATCTTGG2090.18593809773760486No Hit
CATAGAACAGTCAAATCTCCGAGTAAACAGAACAGCTAAAAATCTTGGAG2050.18237947385745934No Hit
CATAGATGGAAATTTTTGGCCAGGCGCGATGGCTCACACCTATAATCCCA2040.18148981788742294No Hit
CATAGAACAGTCAAATCTCCGAGTAAACAGAAAAGCAAACTAACACAGAA1800.16013807460654964No Hit
CATAGACCTGTGTGTGAGGCATTGTTGGTGGAGGGCTTTGCTGTTTCTAT1760.1565794507264041No Hit
CATAGATGTGGTCTCAGTGCCCTATGAGAACATTAGCTTAGTTAATTAGG1720.15302082684625853No Hit
CATAGATCATGGGACTTCAGCATGGAGACAGCCGCTCACCTCTATGAGAC1710.15213117087622216No Hit
CATAGATGCCTCAAAGAGCTGGAGACAGCCGCTCACCTCTATGAGACCAA1680.149462202966113No Hit
CATAGACTCTGTTTTGCTACCTGGGGCTGAGAAAGGAGGATCACTCTATG1670.1485725469960766No Hit
CATAGACTCTGTTTTGCTACCTGGGGACACTGACGACATGTGTGAGAGGG1590.14145529923578554No Hit
CATAGATCCCCATCTTTCCAATGTTTCCTACGGAGATAGAGAGGTTGGTT1590.14145529923578554No Hit
CATAGATCATGGGACTTCAGCATGGCTGAGAAAGGAGGATCACTCTATGA1580.14056564326574914No Hit
CATAGATGCTTCTGATATGTTGCCGTAGGAGAGGAGGGGGCAGAATATCT1580.14056564326574914No Hit
CATAGACTCTGTTTTGCTACCTGGGGTGGGGAAAGAGAGCACTCTATGAG1540.13700701938560358No Hit
CATAGACGGGCCAGAGAATAGTGCTAGGACACTTTGGACTCTGCCTCTAT1520.1352277074455308No Hit
CATAGAACAGTAAGTCAGCTCCTCCTCATAGAACAGCTAAAAATCTTGGA1490.13255873953542166No Hit
CATAGACTCTGTTTTGCTACCTGGGGGCGGTCATTCTTCTCTGGGGGCTC1460.1298897716253125No Hit
CATAGATGGAAATTTTTGGCCAGGCGCAATGGCTCACACCTATAATCCCA1440.1281104596852397No Hit
CATAGATCACCCAGCCCATATTGCACATCTACAAGGACACTTTGGACTCT1430.12722080371520333No Hit
CATAGATGTGCCACATACCTTTCCCATAGAACAGCTAAAAATCTTGGAGC1420.12633114774516693No Hit
CATAGAGAACAGCCCTGAGAGAATGCTAGAGAACAGCTAAAAATCTTGGA1400.12455183580509417No Hit
CATAGACCACCGTGCCCAGATAAGTTTTTTGTATTTTTGGTAGAGACAGG1390.12366217983505777No Hit
CATAGATCATGGGACTTCAGCATGGCTCACACCTATAATCCCATCTATGA1380.1227725238650214No Hit
CATAGAAGAGTGTGCTGTGTCTTCCGTAGCACAACTGGCATCTGGTGATC1380.1227725238650214No Hit
CATAGACCCCATGTGCAGTGTAAGCTGAGAAAGGAGGATCACTCTATGAG1340.11921389998487585No Hit
CATAGAGCTTTAAGACCTGTCAGTGACCTGTTCACTCTGATGGTACTTCT1320.11743458804480307No Hit
CATAGATGCTTCTGATATGTTGCCGTAGGACACTTTGGACTCTGCCTCTA1300.1156552761047303No Hit
CATAGAAGGAGCTGGACTGGATGGACTGGTGGAGGGCTTTGCTGTTTCTA1300.1156552761047303No Hit
CATAGAAGAGTGTGCTGTGTCTTCCGTGTACTCTCAGTTGTGTGTGTGGT1250.11120699625454837No Hit
CATAGACCACCGTGCCCAGATAAGTTTTTGTATTTTTGGTAGAGACAGGG1230.1094276843144756No Hit
CATAGACCACCGTGCCCAGATAAGTTTTGTAGTTTTGGTGGAGACAGCCG1220.10853802834443921No Hit
CATAGAAGTGACCCTCAGCTCAGTGACTCTCAGTTGTGTGTGTGGTCTAT1220.10853802834443921No Hit
CATAGAGCAGCCATAGATAATTAATACACTTCTACAAGGACACTTTGGAC1210.10764837237440283No Hit
CATAGACTCTGTTTTGCTACCTGGGGGCTGGTCATTCTTCTCTGGGGGCT1210.10764837237440283No Hit
CATAGAACATCTACAGAACTCTCTACCCATCTATGAGACCAAAGCTAGAA1200.10675871640436643No Hit
CATAGATGCCTCAAAGAGCTGAAGACAGTGTAACTTAGCAACCTGTACAT1160.10320009252422087No Hit
CATAGACTAATAGCCTCCCAAAGATTCCTGTGCCTCTTGTAGAAGGGATG1150.1023104365541845No Hit
CATAGAGAACAGCCCTGAGAGAATGCTCAGATCTCAAAAGGCTTCTATGA1150.1023104365541845No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)