FastQCFastQC Report
Wed 28 Jun 2023
EGAF00005804583

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005804583
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences112403
Sequences flagged as poor quality0
Sequence length150
%GC34

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
CATAGATCTCCCTAATTAACTAAGCTAATGTTCTGTTTACTCGGAGATTT105239.3618497726929No Hit
CATAGATCACTGATTCTGTATTTGCAAATTCTGTTTACTCGGAGATTTGA100778.965063210056671No Hit
CATAGACATGATGTGCTATGAAGTTAGAGGAGAATGATATTGTTGCAGAT93838.347641966851418No Hit
CATAGATGAGTGTCCTTGTAGATGTGCAATATGGGCTGGGTGATCTATGT59935.331708228428067No Hit
CATAGAGGTGAGCGGCTGTCTCCACAAGTCCGCGCAGAGCCTTCAGGTCA54804.875314715799401No Hit
CATAGAAGGGTTGAGTCTGGAGGCTGACACCTTCCTCCAGACTCTATGTG53184.731190448653506No Hit
CATAGAAAAAGAACTGAGGAAAGGCAACCAAAATGTCAGGGGATCCTCTA41713.7107550510217697No Hit
CATAGAAGTACCATCAGAGTGAACAGGGCAGAGAGTGTGTTGTATTCTAT38993.4687686271718725No Hit
CATAGATCTCCCTAATTAACTAAGCTAATGTTCTGAGGAGAATGATATTG31702.8202094250153467No Hit
CATAGAGCAGCATTTCTCTCCAAGGAGGAGCTGACTTACTGTTCTATGTG30612.7232369242813803No Hit
CATAGAGGCAGAGTCCAAAGTGTCCTCTAGCCAAATTCCTTACCGATCTA24602.1885536862895116No Hit
CATAGATGGGATTATAGGTGTGAGCCACTGCGCCTGGCCAAAAATTTCCA19901.77041538037241No Hit
CATAGAGCTCCAAGATTTTTAGCTGTTCTATGTGAGAAGTGTATTAATTA19011.6912359990391714No Hit
CATAGATGGGATTATAGGTGTGAGCCACCGCGCCTGGCCAAAAATTTCCA17631.5684634751741502No Hit
CATAGAGGAGTGACTTTTGTTGCTGCACCTTCCACTACCCACCTGCCTCT15421.3718495057961086No Hit
CATAGATGGGATTATAGGTGTGAGCCACCACGCCTGGCCAAAAATTTCCA12371.1005044349350106No Hit
CATAGATCCCATACTCCTCCATTACCCTTCCACTACCCACCTGCCTCTAT11561.0284423013620634No Hit
CATAGAGGCACGATCTTGTTTCACTGAGCTGAGGGTCACTTCTATGTGTA8600.7651041342312928No Hit
CATAGATGAGTGTCCTTGTAGATGTGCAGGGCAGAGAGTGTGTTGTATTC7950.7072764961789276No Hit
CATAGAAGCCTTTTGAGATCTGAGCATCTATACGGCAACATATCAGAAGC7740.6885937208081635No Hit
CATAGAAGGGTTGAGTCTGGAGGCTGACACCTTCCACTACCCACCTGCCT7440.6619040417070718No Hit
CATAGAGGTGGTGGGTACTTGTAGTCCATCCAGTCCAGCTCCTTCTATGT7370.6556764499168172No Hit
CATAGAGCTCCAAGATTTTTAGCTGTTCTACATAGACCTTTTTCTGTAGT7300.6494488581265625No Hit
CATAGAGGCAGAGTCCAAAGTGTCCTGGGAAAGGTATGTGGCACATCTAT6230.5542556693326691No Hit
CATAGAAACAGCAAAGCCCTCCACCACCCACCTGCCTCTATGTGTAGAAC6120.5444694536622688No Hit
CATAGATCACCAGATGCCAGTTGTGCAATATGGGCTGGGTGATCTATGTG5670.5044349350106314No Hit
CATAGATGGGAGTTTCTAGCTTTGGTCTATAGGAATCTTTGGGAGGCTAT5630.5008763111304859No Hit
CATAGAGTGCTCTCTTTCCCCACCCTTCCACTACCCACCTGCCTCTATGT5620.49998665516044943No Hit
CATAGAAAAAGAACTGAGGAAAGGCAACATAAGAGGAGAATGATATTGTT5430.48308319172975805No Hit
CATAGATCTCCCTAATTAACTAAGCTAATGTTCTTGCTCCTTCTCACACA5090.4528348887485209No Hit
CATAGAAACAGCAAAGCCTTCCACTACCCACCTGCCTCTATGTGTAGAAC5050.4492762648683754No Hit
CATAGATCACTGATTCTGTATTTGCAAATTCTCACTGAGCTGAGGGTCAC4610.41013140218677435No Hit
CATAGACATGATGTGCTATGAAGTTAGAGGAGGAGCTGACTTACTGTTCT4130.3674279156250278No Hit
CATAGACCATCCCTTCTACAAGAGGCAACAATGCCTCACACACAGGTCTA3970.35319342010444565No Hit
CATAGAGTGAAACCCTGTCTCTACCAAAACTACAAAACTTATCTGGGCAC3640.3238347730932449No Hit
CATAGATACCTGTCCTCTGCCTCGAGGAGAATGATATTGTTGCAGATTTC3580.3184968372730265No Hit
CATAGAGTGCTCTCTTTCCCCACCCTAACCTCCCACCCCAGCTGTCTATG3550.31582786936291735No Hit
CATAGAGTGAAACCCTGTCTCTACCAAAAATACAAAACTTATCTGGGCAC3310.2944761260820441No Hit
CATAGAGGTGAGCGGCTGTCTTCAGCTCTTTGAGGCATCTATGTGTAGAA3200.2846899104116438No Hit
CATAGAGTCCTTCCCTCTCACACATGTCTAACAATGCCTCACACACAGGT3050.27134507086109805No Hit
CATAGATGGGAGTTTCTAGCTTTGGTCTATGAGGAATCTTTGGGAGGCTA3010.26778644698095244No Hit
CATAGAGGAGTGACTTTTGTTGCTGCAATAGAGGAGAATGATATTGTTGC2990.2660071350408797No Hit
CATAGAGGTTTTCTGTTTCTGTGTTAGTTTGCTTTCTGTTTACTCGGAGA2920.259779543250625No Hit
CATAGATCACCAGATGCCAGTTGTGCACACGGAAGACACAGCACACTCTT2760.2455450477300428No Hit
CATAGAAGTACCATCAGAGTGAACAGGCTACGGCAACATATCAGAAGCAT2440.21707605668887842No Hit
CATAGAGGCAGAGTCCAAAGTGTCCTTCCACTACCCACCTGCCTCTATGT2340.20817949698851454No Hit
CATAGAGGAGTGACTTTTGTTGCTGCATAGAGGAGAATGATATTGTTGCA2240.19928293728815066No Hit
CATAGAGGAGTGACTTTTGTTGCTGCATACGATAGCGAGAAGAGTGGAGG2210.19661396937804151No Hit
CATAGAGTGAAACCCTGTCTCTACCAAAAGTACCAAAACTTATCTGGGCA2200.19572431340800514No Hit
CATAGAGCTCCAAGATTTTTAGCTGTTCTCTATGCATTCTCTCAGGGCTG2120.18860706564771404No Hit
CATAGAGCTCCAAGATTTTTAGCTGTTCTGTTTACTCGGAGATTTGACTG2010.17882084997731376No Hit
CATAGATGGGATTATAGGTGTGAGCCATCGCGCCTGGCCAAAAATTTCCA2010.17882084997731376No Hit
CATAGAAACAGCAAAGCCCTCCACCAACAATGCCTCACACACAGGTCTAT1750.1556897947563677No Hit
CATAGAGGTTTTCTGTTTCTGTGTTAGTTTGCTTTTCTGTTTACTCGGAG1740.15480013878633134No Hit
CATAGATCTCCCTAATTAACTAAGCTAATGTTCTCATAGGGCACTGAGAC1740.15480013878633134No Hit
CATAGAGGTGAGCGGCTGTCTCCATGCTGAAGTCCCATGATCTATGTGTA1680.149462202966113No Hit
CATAGAGTGATCCTCCTTTCTCAGCCCCAGGTAGCAAAACAGAGTCTATG1680.149462202966113No Hit
CATAGAGGTGAGCGGCTGTCTCCAGCTCTTTGAGGCATCTATGTGTAGAA1650.14679323505600383No Hit
CATAGAACCAACCTCTCTATCTCCGTAGGAAACATTGGAAAGATGGGGAT1620.14412426714589469No Hit
CATAGATATTCTGCCCCCTCCTCTCCTACGGCAACATATCAGAAGCATCT1600.1423449552058219No Hit
CATAGAGTCCTTCCCTCTCACACATGTCGTCAGTGTCCCCAGGTAGCAAA1590.14145529923578554No Hit
CATAGAGTGATCCTCCTTTCTCAGCCATGCTGAAGTCCCATGATCTATGT1550.13789667535563996No Hit
CATAGAGTGCTCTCTTTCCCCACCCCAGGTAGCAAAACAGAGTCTATGTG1540.13700701938560358No Hit
CATAGAGGCAGAGTCCAAAGTGTCCTAGCACTATTCTCTGGCCCGTCTAT1520.1352277074455308No Hit
CATAGAGCTCCAAGATTTTTAGCTGTTCTATGAGGAGGAGCTGACTTACT1490.13255873953542166No Hit
CATAGATGGGATTATAGGTGTGAGCCATTGCGCCTGGCCAAAAATTTCCA1480.13166908356538526No Hit
CATAGAGCCCCCAGAGAAGAATGACCGCCCCCAGGTAGCAAAACAGAGTC1440.1281104596852397No Hit
CATAGAGGCAGAGTCCAAAGTGTCCTTGTAGATGTGCAATATGGGCTGGG1440.1281104596852397No Hit
CATAGATGGGATTATAGGTGTGAGCCATGCTGAAGTCCCATGATCTATGT1400.12455183580509417No Hit
CATAGAGCTCCAAGATTTTTAGCTGTTCTATGGGAAAGGTATGTGGCACA1400.12455183580509417No Hit
CATAGATCACCAGATGCCAGTTGTGCTACGGAAGACACAGCACACTCTTC1390.12366217983505777No Hit
CATAGAGCTCCAAGATTTTTAGCTGTTCTCTAGCATTCTCTCAGGGCTGT1380.1227725238650214No Hit
CATAGAGTGAAACCCTGTCTCTACCAAAAATACAAAAAACTTATCTGGGC1380.1227725238650214No Hit
CATAGAGTGATCCTCCTTTCTCAGCTTACACTGCACATGGGGTCTATGTG1340.11921389998487585No Hit
CATAGAGGCAGAGTCCAAAGTGTCCTACGGCAACATATCAGAAGCATCTA1310.1165449320747667No Hit
CATAGAAACAGCAAAGCCCTCCACCAGTCCATCCAGTCCAGCTCCTTCTA1300.1156552761047303No Hit
CATAGACCACACACACAACTGAGAGTACACGGAAGACACAGCACACTCTT1300.1156552761047303No Hit
CATAGAAGTACCATCAGAGTGAACAGGTCACTGACAGGTCTTAAAGCTCT1280.11387596416465753No Hit
CATAGAGGCAGAGTCCAAAGTGTCCTTGTAGAAGTGTATTAATTATCTAT1240.11031734028451197No Hit
CATAGACCACACACACAACTGAGAGTCACTGAGCTGAGGGTCACTTCTAT1230.1094276843144756No Hit
CATAGAGGTGAGCGGCTGTCTCCACCAAAACTACAAAACTTATCTGGGCA1220.10853802834443921No Hit
CATAGAGTGAAACCCTGTCTCTACCAAAAATACAAAAACTTATCTGGGCA1210.10764837237440283No Hit
CATAGAGCCCCCAGAGAAGAATGACCAGCCCCCAGGTAGCAAAACAGAGT1200.10675871640436643No Hit
CATAGAAGCCTTTTGAGATCTGAGCATTCTCTCAGGGCTGTTCTCTATGT1190.10586906043433003No Hit
CATAGATGGGAGTTTCTAGCTTTGGTCTCATAGATGGGTAGAGAGTTCTG1180.10497940446429366No Hit
CATAGACCATCCCTTCTACAAGAGGCACAGGAATCTTTGGGAGGCTATTA1160.10320009252422087No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)