FastQCFastQC Report
Wed 28 Jun 2023
EGAF00005804584

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005804584
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences21599
Sequences flagged as poor quality0
Sequence length150
%GC38

[WARN]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
CATAGACCTGGGCTTAGGGGCTACACATGGCTATGCAATCTATGAGACCA16517.64387240150007No Hit
CATAGACCTGGGCTTAGGGGCTATACATGGCTATGCAATCTATGAGACCA15547.194777535997036No Hit
CATAGAACTTCACAAGGGCTTTAGGGGCTACACATGGCTATGCAATCTAT14446.685494698828649No Hit
CATAGATCCCATCCAATAATAATGAGCAAGCAATGGGGAAAGGATTCTAT9024.176119264780777No Hit
CATAGATGCCCTTTTTGTGTACTTCCACACTGACGACATGGTTCTACACA8924.1298208250381965No Hit
CATAGATCCCATCCAATAATAATGAGCAAGCAATGGGCAAGCAATGACAG7643.5372007963331633No Hit
CATAGACAGGGAGGCGTATAAGTGATGACTGATACAGGAAGGCCTTTCTA7163.3149682855687765No Hit
CATAGACAGGGAGGCGTATAAGTGATGACACTGACTGATACAGGAAGGCC5972.7640168526320665No Hit
CATAGAAAACAGAGTCACAGTCCCCAGTGTACCTGATTGGCCATTTGAAC5802.685309505069679No Hit
CATAGAAACCCCAAAGGCTATGTTCAAAATGGTCAAACAGGAGGTCTATG5602.5927126255845176No Hit
CATAGATGTCAAGAGTCTAATTCCTGCTTCCTTCTGCTGGCTATTCTATG5042.333441363026066No Hit
CATAGAAAACAGAGTCACAGTCCCCAGTAATGTTAGCATGTCTATGAGAC4842.2408444835409047No Hit
CATAGAAACCCCAAAGGCTATGTTCAGTGTAATAAATGGGGGCAAGGAAG4251.9676836890596787No Hit
CATAGAAAACAGAGTCACAGTCCCCAGTATCCCCAGAAATGTTAGCATGT4151.921385249317098No Hit
CATAGATGCCCTTTTTGTGTACTTCCATGTGCTTCTTTCAAAAGTCTGGT3761.7408213343210335No Hit
CATAGACAATTAAATTTTCTTAAGGGGTTGCACAGATCATTTAAGCTCAA3631.6806333626556786No Hit
CATAGATCATGGGACTTCAGCATGGAGACAGCCGCTCACCTCTATGAGAC3491.6158155470160653No Hit
CATAGATCCCATCCAATAATAATGAACAAGCAATGGGGAAAGGATTCTAT3301.5278485115051623No Hit
CATAGACCTGGGCTTAGGGGCTATACGTGAATGTGGATCAGAACTTCTAT3011.3935830362516783No Hit
CATAGAGGATCCCATCTGAGTTGGTCTATGTGACAAGCAATGGGGAAAGG2561.1852400574100652No Hit
CATAGATGTATACAAGCTGTCACAGACAACAAGCAATGGGGAAAGGATTC2371.097273021899162No Hit
CATAGAGCTGGCTTCCTAACTTCCAAGAGCTGCCTTCCTAACCATGGGCA2150.9954164544654845No Hit
CATAGATCCTCTCATTGTCCAGTTTGGAGACAGCCGCTCACCTCTATGAG2150.9954164544654845No Hit
CATAGAGCCAAGGAAAGTTGAATGGAGACAGCCGCTCACCTCTATGAGAC2080.963007546645678No Hit
CATAGATGTCAAGAGTCTAATTCCTGCTCCCGTAACAAGCAATGGGGAAA1990.9213389508773555No Hit
CATAGATTTGTAAATTGCCTAGTCTTGCATACACTGACTGATACAGGAAG1880.8704106671605167No Hit
CATAGACAGGGAGGCGTATAAGTGATGTCCTTTCCCTCACTCTCTCCATC1580.7315153479327746No Hit
CATAGATGTCAAGAGTCTAATTCCTGCTCACACTGACTGATACAGGAAGG1530.7083661280614844No Hit
CATAGATGTCCATCATGTGGAAGCTGCCTTCCTAACCATGGGCATATCTA1500.6944765961387102No Hit
CATAGAACTTCACAAGGGCTTTAGGGCTACACATGGCTATGCAATCTATG1140.5278022130654197No Hit
CATAGACCTTTGGGTTCATATCATCTGGAGACAGCCGCTCACCTCTATGA1050.4861336172970971No Hit
CATAGAACTTCACAAGGGCTTTAGGGGCTATACGTGAATGTGGATCAGAA1010.46761424140006486No Hit
CATAGACAATTAAATTTTCTTAAGGGGTTGCTTCCTTCTGCTGGCTATTC990.4583545534515487No Hit
CATAGATGTCAAGAGTCTAATTCCTGCTCTTGTCTGTTATTCAAAGGTTT960.4444650215287745No Hit
CATAGACCTTTGGGTTCATATCATCTGGCTACACATGGCTATGCAATCTA890.412056113708968No Hit
CATAGATCCCATCCAATAATAATGAGCAAGCAATGACAGTCTATGAGACC880.40742626973470997No Hit
CATAGATGTATACAAGCTGTCACAGACAACAATGGGCAAGCAATGACAGT860.39816658178619385No Hit
CATAGATCCCATCCAATAATAATGAGCAACACTGACTGATACAGGAAGGC820.37964720588916157No Hit
CATAGATGCCCTTTTTGTGTACTTCCATACGGTAGCAGAATTACCTCTGG780.3611278299921293No Hit
CATAGATGTCAAGAGTCTAATTCCTGCTCTATATACGTGAATGTGGATCA760.3518681420436131No Hit
CATAGATGTCAAGAGTCTAATTCCTGCTCTATTCTGTTATTCAAAGGTTT740.342608454095097No Hit
CATAGATGTCCATCATGTGGAAGCTGTCACAGACAAGCAATGGGGAAAGG730.33797861012083896No Hit
CATAGAAAACAGAGTCACAGTCCCCAGTAATGTTAGCATGTCTATCCCCA710.3287189221723228No Hit
CATAGAAAACAGAGTCACAGTCCCCAGTAATGTTATCCCCAGAAATGTTA640.2963100143525163No Hit
CATAGATGCCCTTTTTGTGTACTTCCACTGACGACATGGTTCTACACATA630.2916801703782583No Hit
CATAGAAAACAGAGTCACAGTCCCCAGTAATGTACCATGTTTTCATCCTG610.2824204824297421No Hit
CATAGATCCTCTCATTGTCCAGTTTGGACACTGACTGATACAGGAAGGCC610.2824204824297421No Hit
CATAGATCCCATCCAATAATAATGAGCACACTGACTGATACAGGAAGGCC600.277790638455484No Hit
CATAGAAAACAGAGTCACAGTCCCCAGTTATCCCCAGAAATGTTAGCATG590.273160794481226No Hit
CATAGACAGGGAGGCGTATAAGTGATGCACTGACGACATGGTTCTACACA560.2592712625584518No Hit
CATAGAAAACAGAGTCACAGTCCCCAGTAATGTTAGCATATCCCCAGAAA550.2546414185841937No Hit
CATAGATGAAAGCCTGTTGAATTTATGAGACCAAGTCTCTGCTACCGTAG550.2546414185841937No Hit
CATAGACCTGGGCTTAGGGGCTATACACTGACGACATGGTTCTACACATA530.2453817306356776No Hit
CATAGATGCCCTTTTTGTGTGCTTCTTTCAAAAGTCTGGTCTATGAGACC500.23149219871290336No Hit
CATAGATGCCCTTTTTGTGTACTTCCATTCTACACATAGATGCCCTTTTT490.2268623547386453No Hit
CATAGATGCCCTTTTTGTGTACTTCCACACATAGATGCCCTTTTTGTGTG480.22223251076438724No Hit
CATAGATCATGGGACTTCAGCATGGCTACACATGGCTATGCAATCTATGA450.20834297884161304No Hit
CATAGAACCTCTTTTGGGGCAAAGTTCCAATCCACAAAGTCACGAAAGTG450.20834297884161304No Hit
CATAGAAAACAGAGTCACAGTCCCCAGTCAGAGTCACAATCCCCAGAAAT450.20834297884161304No Hit
CATAGATGTCAAGAGTCTAATTCCTGCTCTGTTATTCAAAGGTTTTCTGC440.20371313486735498No Hit
CATAGATCCCATCCAATAATAATGAGCAAGCAATGACAGTCCAATGGGCA410.18982360294458078No Hit
CATAGAGCTGGCTTCCTAACTTCCAAACAATGGGCAAGCAATGACAGTCT400.1851937589703227No Hit
CATAGATGCCCTTTTTGTGTACTTCCATGCTTCCTTCTGCTGGCTATTCT390.18056391499606464No Hit
CATAGAAAACAGAGTCACAGTCCCCAGTGAGTCACAATCCCCAGAAATGT380.17593407102180655No Hit
CATAGATCCCATCCAATAATAATGAGCAAGCAATGACAATGGGCAAGCAA380.17593407102180655No Hit
CATAGAGCCAAGGAAAGTTGAATGGACAAGCAATGGGGAAAGGATTCTAT370.1713042270475485No Hit
CATAGATGCCCTTTTTGTGTACTTCCATGTCGTCACAAGCAATGGGGAAA350.16204453909903235No Hit
CATAGAGCTGGCTTCCTAACTTCCAACAATGGGCAAGCAATGACAGTCTA340.1574146951247743No Hit
CATAGAAAACAGAGTCACAGTCCCCAGAAATGTTAGCATGTCTATGAGAC320.14815500717625815No Hit
CATAGATCCCATCCAATAATAATGAGCAAGCAACAATGGGCAAGCAATGA310.1435251632020001No Hit
CATAGATTTGTAAATTGCCTAGTCTTGCATCTATGAGACCAAGTCTCTGC300.138895319227742No Hit
CATAGATCCCATCCAATAATAATGAGCAATGGGCAAGCAATGACAGTCTA300.138895319227742No Hit
CATAGACAGAAACCACCCAGACAACCCTGACTGATACAGGAAGGCCTTTC280.1296356312792259No Hit
CATAGAAAACAGAGTCACAGTCCCCAGTAATGTTAGCATGTTATCCCCAG270.12500578730496784No Hit
CATAGATGTCCATCATGTGGAAGCTGGCTATTCTATGAGACCAAGTCTCT230.10648641140793555No Hit
CATAGAACTTCACAAGGGCTTTAGGGGCTATACACTGACGACATGGTTCT220.10185656743367749No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)