FastQCFastQC Report
Wed 28 Jun 2023
EGAF00005804588

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005804588
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences75343
Sequences flagged as poor quality0
Sequence length150
%GC36

[FAIL]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
CATAGATCACCCAGCCCATATTGCACATCTACAAGGACACTCATCTATGA50456.696043428055693No Hit
CATAGAGGCAGGTGGGTAGTGGAAGGTGCAGCAACAAAAGTCACTCCTCT32664.334841989302258No Hit
CATAGAAGTGACCCTCAGCTCAGTGAAACAAGATCGTGCCTCTATGAGAC29573.92471762472957No Hit
CATAGAGTCTGGAGGAAGGTGTCAGCCTCCAGACTCAACCCTTCTATGAG28383.7667732901530333No Hit
CATAGAGGATCCCCTGACATTTTGGTTGCCTTTCCTCAGTTCTTTTTCTA22532.9903242504280425No Hit
CATAGATCGGTAAGGAATTTGGCTAGAGGACACTTTGGACTCTGCCTCTA20602.734162430484584No Hit
CATAGATGCCTCAAAGAGCTGAAGACAGCCGCTCACCTCTATGAGACCAA17132.2736020599126663No Hit
CATAGATCATGGGACTTCAGCATGGCTCACACCTATAATCCCATCTATGA17032.260329426754974No Hit
CATAGAAATCTGCAACAATATCATTCTCCTCTAACTTCATAGCACATCAT15762.0917669856522836No Hit
CATAGAAGGAGCTGGACTGGATGGACTACAAGTACCCACCACCTCTATGA14791.9630224440226698No Hit
CATAGATGCCTCAAAGAGCTGGAGACAGCCGCTCACCTCTATGAGACCAA14651.9444407576019007No Hit
CATAGAACAGTCAAATCTCCGAGTAAACAGAATTTGCAAATACAGAATCA14221.8873684350238242No Hit
CATAGAATACAACACACTCTCTGCCCTGTTCACTCTGATGGTACTTCTAT12251.625897561817289No Hit
CATAGATCATGGGACTTCAGCATGGCTGAGAAAGGAGGATCACTCTATGA11731.5568798693972896No Hit
CATAGAGGCAGGTGGGTAGTGGAAGGTGTCAGCCTCCAGACTCAACCCTT8371.1109193952988334No Hit
CATAGACAGCTGGGGTGGGAGGTTAGGGTGGGGAAAGAGAGCACTCTATG7821.0379199129315266No Hit
CATAGAAATCTGCAACAATATCATTCTCCTCTACACATAGAGAACAGCTA7260.9635931672484505No Hit
CATAGACTCTGTTTTGCTACCTGGGGCTGAGAAAGGAGGATCACTCTATG7080.9397024275646046No Hit
CATAGAACAGTCAAATCTCCGAGTAAACAGAACATTAGCTTAGTTAATTA6980.9264297944069124No Hit
CATAGATCACTTGACTACAGAAAAAGGTCTACACTGACGACATGGCTCAC6940.9211207411438355No Hit
CATAGAGGCAGGTGGGTAGTGGAAGGCTTTGCTGTTTCTATGAGACCAAG6810.9038663180388358No Hit
CATAGACCCCATGTGCAGTGTAAGCTACACTGACGACATGGTTCTACACA6560.8706847351446053No Hit
CATAGATCACCCAGCCCATATTGCACAACTGGCATCTGGTGATCTATGAG6480.8600666286184517No Hit
CATAGAGGCAGGTGGGTGGTGGAGGGCTTTGCTGTTTCTATGAGACCAAG6220.8255577824084519No Hit
CATAGATGTGCCACATACCTTTCCCAGGACACTTTGGACTCTGCCTCTAT6110.8109578859349906No Hit
CATAGAAATCTGCAACAATATCATTCTCCTCTATGAGACCAAGTCAGGGT6000.7963579894615294No Hit
CATAGAAGGAGCTGGACTGGATGGACTGGTGGAGGGCTTTGCTGTTTCTA5420.7193767171469148No Hit
CATAGAACAGTAAGTCAGCTCCTCCTTGGAGAGAAATGCTGCTCTATGAG5390.7153949271996072No Hit
CATAGAACAGTCAAATCTCCGAGTAAACAGACCAAAGCTAGAAACTCCCA4950.6569953413057616No Hit
CATAGAAATCTGCAACAATATCATTCTCCTCGAGGCAGAGGACAGGTATC4840.6423954448323003No Hit
CATAGAAGGAGCTGGACTGGATGGACAAAGGGTGGGGAAAGAGAGCACTC4550.603904808674993No Hit
CATAGAATACAACACACTCTCTGCCCTGCCTCTTGTAGAAGGGATGGTCT4250.5640869092019165No Hit
CATAGAAGAGTGTGCTGTGTCTTCCGTATGGTGGAGGGCTTTGCTGTTTC4250.5640869092019165No Hit
CATAGAGGCAGGTGGGTAGTGGAAGGGTGGGGAAAGAGAGCACTCTATGA3630.4817965836242252No Hit
CATAGAAATCTGCAACAATATCATTCTCCTCACACTGACGACATGGCTCA3610.4791420569926868No Hit
CATAGACAGCTGGGGTGGGAGGTTAGGGTAATGGAGGAGTATGGGATCTA3520.46719668715076385No Hit
CATAGATCCCCATCTTTCCAATGTTTCCTACACTGACGACATGGCTCACA3250.431360577624995No Hit
CATAGATCACTTGACTACAGAAAAAGGTCTGCTGAGATTGGCCTGTGTCT3210.4260515243619182No Hit
CATAGATCACCCAGCCCATATTGCACATCTACAAGGACACTTTGGACTCT3190.42339699773037975No Hit
CATAGATCATGGGACTTCAGCATGGCACACTGACGACATGGTTCTACACA3130.4154334178357645No Hit
CATAGAAATCTGCAACAATATCATTCTCCTCTGGGGGCTCTATGAGACCA3070.40746983794114916No Hit
CATAGATTTGTGTGAGAAGGAGCAAGACCAAAGCTAGAAACTCCCATCTA3060.40614257462537995No Hit
CATAGAATACAACACACTCTCTGCCCTGCACTGACGACATGGCTCACACC3030.40216078467807226No Hit
CATAGAACAGTAAGTCAGCTCCTCCTCTAACTTCATAGCACATCATGTCT2820.37428825504691876No Hit
CATAGAAGTGACCCTCAGCTCAGTGACTCTCAGTTGTGTGTGTGGTCTAT2770.3676519384680727No Hit
CATAGACTCTGTTTTGCTACCTGGGGATAGAACAGCTAAAAATCTTGGAG2670.35437930531038053No Hit
CATAGAACAGTCAAATCTCCGAGTAAACAGAAGCAAACTAACACAGAAAC2480.32916130231076546No Hit
CATAGAAGTGACCCTCAGCTCAGTGAGAACAGCTAAAAATCTTGGAGCTC2470.32783403899499625No Hit
CATAGATGCTTCTGATATGTTGCCGTTGCCTTTCCTCAGTTCTTTTTCTA2460.326506775679227No Hit
CATAGAGCAGCCATAGATAATTAATACACTTCTCACATAGACCAAAGCTA2430.32252498573191934No Hit
CATAGAACAGTAAGTCAGCTCCTCCTACACTGACGACATGGTTCTACACA2420.32119772241615013No Hit
CATAGATGATCCATCTACCTCTGCTTCAACTTAGCAACCTGTACATTTCG2420.32119772241615013No Hit
CATAGAATACAACACACTCTCTGCCCTGCACATCTACAAGGACACTCATC2370.3145614058373041No Hit
CATAGACTCTGTTTTGCTACCTGGGGCATAGAACAGCTAAAAATCTTGGA2370.3145614058373041No Hit
CATAGATCACTTGACTACAGAAAAAGGTCTATGTGGCTGAGAAAGGAGGA2340.3105796158899964No Hit
CATAGAGCTTTAAGACCTGTCAGTGACCCTCAGCACAGTGAAACAAGATC2310.30659782594268875No Hit
CATAGAAGAGTGTGCTGTGTCTTCCGTACAGGTGCAAATTGTCAGTGTGT2300.30527056262691954No Hit
CATAGACGGGCCAGAGAATAGTGCTAGAACCATGAGAACAGCTAAAAATC2300.30527056262691954No Hit
CATAGACTCTGTTTTGCTACCTGGGGTGGGGAAAGAGAGCACTCTATGAG2290.30394329931115033No Hit
CATAGAGAACAGCCCTGAGAGAATGCCATAGAGAACAGCTAAAAATCTTG2280.3026160359953811No Hit
CATAGACCCCATGTGCAGTGTAAGCTGAGAAAGGAGGATCACTCTATGAG2230.29597971941653506No Hit
CATAGACCAGCAGTTCTACTCCTAGATATACAACACTGACGACATGGTTC2220.2946524561007658No Hit
CATAGAGCAGCCATAGATAATTAATACACTTCTACAAGGACACTTTGGAC2190.29067066615345816No Hit
CATAGATGTGCCACATACCTTTCCCAGTGTGGAGAGGAGGGGGCAGAATA2190.29067066615345816No Hit
CATAGACTAATAGCCTCCCAAAGATTCCTGTGCCTCTTGTAGAAGGGATG2120.2813798229430737No Hit
CATAGACCCCATGTGCAGTGTAAGCTACACTGACGACATGGCTCACACCT2110.28005255962730446No Hit
CATAGAGCAGCCATAGATAATTAATACACTTCTGCTGAGATTGGCCTGTG2050.2720889797326892No Hit
CATAGAGGCAGGTGGGTAGTGGAAGGGTAATGGAGGAGTATGGGATCTAT2050.2720889797326892No Hit
CATAGAAATCTGCAACAATATCATTCTCCTCCAGATCCTTGTCAACTCTT2040.27076171641691993No Hit
CATAGATGCTTCTGATATGTTGCCGTGTAGAACAGCTAAAAATCTTGGAG2000.2654526631538431No Hit
CATAGACTCTGTTTTGCTACCTGGGGTACACATAGACCAAAGCTAGAAAC1980.26279813652230466No Hit
CATAGATCGGTAAGGAATTTGGCTAGAGGCAGAGGACAGGTATCTATGAG1970.26147087320653545No Hit
CATAGAAATCTGCAACAATATCATTCTCCTCTCCCTCATTATCCCTGTGC1960.26014360989076624No Hit
CATAGATCCCCATCTTTCCAATGTTTCCTGGTGGAGGGCTTTGCTGTTTC1950.25881634657499697No Hit
CATAGAGAACAGCCCTGAGAGAATGCTGCTCTATGAGACCAAGTCTCTGC1950.25881634657499697No Hit
CATAGAGCCTCCACTCTTCTCGCTATCGTAGCAAACTAACACAGAAACAG1920.25483455662768933No Hit
CATAGAAGGTAGGGTACTATTGATTAGAAAAGTACACTGACGACATGGCT1910.2535072933119201No Hit
CATAGAGCAGCCATAGATAATTAATACACTTCTGGAGAGGAGGGGGCAGA1900.25218002999615097No Hit
CATAGACTAATAGCCTCCCAAAGATTCCTTGGAGAGAAATGCTGCTCTAT1900.25218002999615097No Hit
CATAGAACAGTAAGTCAGCTCCTCCTAATTAACTTAGCAACCTGTACATT1890.2508527666803817No Hit
CATAGACCTGTGTGTGAGGCATTGTTACACATAGACCTGTGTGTGAGGCA1830.2428891867857664No Hit
CATAGATCATGGGACTTCAGCATGGCCAGGGTAATGGAGGAGTATGGGAT1780.23625287020692035No Hit
CATAGATGCTTCTGATATGTTGCCGTAGATTTACTGACATGGGCAATTCG1720.22828929031230508No Hit
CATAGATGGAAATTTTTGGCCAGGTGCAAATTGTCAGTGTGTCTATGAGA1720.22828929031230508No Hit
CATAGAAATCTGCAACAATATCATTCTCCTCTGGTCATTCTTCTCTGGGG1700.22563476368076663No Hit
CATAGATGCTTCTGATATGTTGCCGTACACTGACGACATGGCTCACACCT1680.2229802370492282No Hit
CATAGATGCCTCAAAGAGCTGAAGACACACTGACGACATGGCTCACACCT1650.21899844710192057No Hit
CATAGATCGGTAAGGAATTTGGCTAGAGGACCACACGCACAACTGGCATC1650.21899844710192057No Hit
CATAGAAGAGTGTGCTGTGTCTTCCGTAGGACACTTTGGACTCTGCCTCT1620.21501665715461293No Hit
CATAGAGAACAGCCCTGAGAGAATGCTGGTTCTACACATAGAGAACAGCT1590.21103486720730527No Hit
CATAGATCATGGGACTTCAGCATGGAGACAGCCGCTCACCTCTATGAGAC1570.20838034057576682No Hit
CATAGATGCCTCAAAGAGCTGAAGACATGTGTGAGAGGGAAGGACTCTAT1540.20439855062845919No Hit
CATAGATCCCCATCTTTCCAATGTTTCCTATCTCCCTCATTATCCCTGTG1510.20041676068115155No Hit
CATAGAAATCTGCAACAATATCATTCTCCTCTGGGGGCGGTCATTCTTCT1510.20041676068115155No Hit
CATAGAGCTTTAAGACCTGTCAGTGACCACACTGACGACATGGCTCACAC1480.1964349707338439No Hit
CATAGACCACCGTGCCCAGATAAGTTGCCTTTCCTCAGTTCTTTTTCTAT1460.19378044410230547No Hit
CATAGAGCCTCCACTCTTCTCGCTATCGTACTCTCAGTTGTGTGTGTGGT1440.19112591747076701No Hit
CATAGAACATCTACAGAACTCTCTACCCAGGGTGGGGAAAGAGAGCACTC1420.1884713908392286No Hit
CATAGAAGGAGCTGGACTGGATGGAGACAGCCGCTCACCTCTATGAGACC1390.18448960089192096No Hit
CATAGATGCCTCAAAGAGCTGAAGACAGTGTTGGTGGAGGGCTTTGCTGT1390.18448960089192096No Hit
CATAGACCCTCCTATCCCTTTTCCCCACACTGACGACATGGCTCACACCT1380.18316233757615172No Hit
CATAGATGCTTCTGATATGTTGCCGTAGGACACTTTGGACTCTGCCTCTA1370.18183507426038253No Hit
CATAGAGAACAGCCCTGAGAGAATGGAGAACAGCTAAAAATCTTGGAGCT1360.1805078109446133No Hit
CATAGATGCTTCTGATATGTTGCCGTAGGACTACAAGTACCCACCACCTC1360.1805078109446133No Hit
CATAGACCTGTGTGTGAGGCATTGTTCTCTGGTCATTCTTCTCTGGGGGC1340.17785328431307487No Hit
CATAGATCCCCATCTTTCCAATGTTTCCTGACATGGCTCACACCTATAAT1340.17785328431307487No Hit
CATAGACTCTGTTTTGCTACCTGGGGAGAGGAGGGGGCAGAATATCTATG1330.17652602099730566No Hit
CATAGAACAGTAAGTCAGCTCCTCCTCACTGACGACATGGCTCACACCTA1330.17652602099730566No Hit
CATAGAGAACAGCCCTGAGAGAATGGAGACAGCCGCTCACCTCTATGAGA1310.17387149436576724No Hit
CATAGAACAGTCAAATCTCCGAGTAAACAGACACTGGAGACAGCCGCTCA1290.1712169677342288No Hit
CATAGATGCCTCAAAGAGCTGAAGACATGGCTCACACCTATAATCCCATC1290.1712169677342288No Hit
CATAGATGCTTCTGATATGTTGCCGTATAGATGCTTCTGATATGTTGCCT1280.16988970441845958No Hit
CATAGAAATCTGCAACAATATCATTCTCCTCTATGAGACCAAGTCTCTGC1280.16988970441845958No Hit
CATAGACCCCATGTGCAGTGTAAGCTACACTGACGACATGTGTGAGAGGG1270.16856244110269036No Hit
CATAGAGCTTTAAGACCTGTCAGTGACCTGTTCACTCTGATGGTACTTCT1200.15927159789230586No Hit
CATAGAGAACAGCCCTGAGAGAATGCGTCAGGGTGGGGAAAGAGAGCACT1170.1552898079449982No Hit
CATAGATGATCCATCTACCTCTGCTTCACACTGACGACATGGCTCACACC1110.1473262280503829No Hit
CATAGATGCCTCAAAGAGCTGAAGACAACTAGGACACTTTGGACTCTGCC1110.1473262280503829No Hit
CATAGAAGTGACCCTCAGCTCAGTGAAACAAGATCGTGCCTCTTGTAGAA1100.1459989647346137No Hit
CATAGAGGCATAGTATTGAAACTGTAGATCACTCAACTTAGCAACCTGTA1090.14467170141884447No Hit
CATAGAAATCTGCAACAATATCATTCTCCTCTATGAGACCAAGTCTGCAG1080.14334443810307526No Hit
CATAGATGTGGTCTCAGTGCCCTATGACAGTGAAACAAGATCGTGCCTCT1080.14334443810307526No Hit
CATAGAACAGTCAAATCTCCGAGTAAACAGACACATAGAACAGCTAAAAA1070.14201717478730605No Hit
CATAGATGCTTCTGATATGTTGCCGTCTACACATAGATGCTTCTGATATG1050.13936264815576763No Hit
CATAGATCATGGGACTTCAGCATGGCTACGGTTGGTAGAGACAGGGTTTC1020.13538085820845996No Hit
CATAGATCGGTAAGGAATTTGGCTAGAGGTCATTCTTCTCTGGGGGCTCT1010.13405359489269075No Hit
CATAGAACAGTCAAATCTCCGAGTAAACAGACATAGAACAGCTAAAAATC950.12609001499807548No Hit
CATAGAGAACAGCCCTGAGAGAATGCTAGAGAACAGCTAAAAATCTTGGA930.12343548836653703No Hit
CATAGAGCAGCCATAGATAATTAATACACTTCTACACTGACGACATGGCT910.12078096173499861No Hit
CATAGAGGCAGGTGGGTAGTGGAAGGACACTTTGGACTCTGCCTCTATGA900.1194536984192294No Hit
CATAGACTCTGTTTTGCTACCTGGGGTGGAGACAGCCGCTCACCTCTATG890.11812643510346017No Hit
CATAGACGGGCCAGAGAATAGTGCTAGAAACTCCCATCTATGAGACCAAA890.11812643510346017No Hit
CATAGATGATCCATCTACCTCTGCTTCAGAACATTAGCTTAGTTAATTAG880.11679917178769096No Hit
CATAGAAATCTGCAACAATATCATTCTCCTCTATGAGACCAAAGCTAGAA870.11547190847192175No Hit
CATAGAAGGAGCTGGACTGGATGGACTGGACTGGAGACAGCCGCTCACCT850.11281738184038331No Hit
CATAGAACAGTCAAATCTCCGAGTAAACAGAACAGCTAAAAATCTTGGAG830.11016285520884489No Hit
CATAGACCCTCCTATCCCTTTTCCCCATAGACCAAAGCTAGAAACTCCCA830.11016285520884489No Hit
CATAGAACAGTAAGTCAGCTCCTCCTATAGAACATTAGCTTAGTTAATTA810.10750832857730647No Hit
CATAGAGCAGCCATAGATAATTAATACACTTCTATAGATCTCCCTCATTA810.10750832857730647No Hit
CATAGAAGTGACCCTCAGCACAGTGAAACAAGATCGTGCCTCTATGAGAC790.10485380194576802No Hit
CATAGATGATCCATCTACCTCTGCTTCACACTGACGACATGGTTCTACAC780.10352653862999882No Hit
CATAGATCCCCATCTTTCCAATGTTTCCTACATGGCTCACACCTATAATC760.10087201199846037No Hit
CATAGACCCCATGTGCAGTGTAAGCTGACGACATGGTTCTACACATAGAG760.10087201199846037No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)