FastQCFastQC Report
Wed 28 Jun 2023
EGAF00005804589

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005804589
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences75343
Sequences flagged as poor quality0
Sequence length150
%GC35

[FAIL]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
CATAGATGAGTGTCCTTGTAGATGTGCAATATGGGCTGGGTGATCTATGT50406.689407111476846No Hit
CATAGAGGAGTGACTTTTGTTGCTGCACCTTCCACTACCCACCTGCCTCT32774.349441885775719No Hit
CATAGAGGCACGATCTTGTTTCACTGAGCTGAGGGTCACTTCTATGTGTA29583.9260448880453396No Hit
CATAGAAGGGTTGAGTCTGGAGGCTGACACCTTCCTCCAGACTCTATGTG28463.7773913966791874No Hit
CATAGAAAAAGAACTGAGGAAAGGCAACCAAAATGTCAGGGGATCCTCTA21942.9120157147976586No Hit
CATAGAGGCAGAGTCCAAAGTGTCCTCTAGCCAAATTCCTTACCGATCTA20632.7381442204318915No Hit
CATAGAGGTGAGCGGCTGTCTTCAGCTCTTTGAGGCATCTATGTGTAGAA17282.293511009649204No Hit
CATAGATGGGATTATAGGTGTGAGCCATGCTGAAGTCCCATGATCTATGT16772.2258205805449744No Hit
CATAGACATGATGTGCTATGAAGTTAGAGGAGAATGATATTGTTGCAGAT15342.0360219263899766No Hit
CATAGAGGTGAGCGGCTGTCTCCAGCTCTTTGAGGCATCTATGTGTAGAA15142.009476660074592No Hit
CATAGAGGTGGTGGGTACTTGTAGTCCATCCAGTCCAGCTCCTTCTATGT14661.9457680209176698No Hit
CATAGATCACTGATTCTGTATTTGCAAATTCTGTTTACTCGGAGATTTGA14131.8754230651819015No Hit
CATAGAAGTACCATCAGAGTGAACAGGGCAGAGAGTGTGTTGTATTCTAT12101.6059886120807505No Hit
CATAGAGTGATCCTCCTTTCTCAGCCATGCTGAAGTCCCATGATCTATGT11811.5674979759234435No Hit
CATAGAAGGGTTGAGTCTGGAGGCTGACACCTTCCACTACCCACCTGCCT8311.102955815404218No Hit
CATAGAGTGCTCTCTTTCCCCACCCTAACCTCCCACCCCAGCTGTCTATG7661.016683699879219No Hit
CATAGAGTGATCCTCCTTTCTCAGCCCCAGGTAGCAAAACAGAGTCTATG7050.935720637617297No Hit
CATAGAGCTCCAAGATTTTTAGCTGTTCTCTATGTGTAGAGGAGAATGAT7030.9330661109857585No Hit
CATAGATCTCCCTAATTAACTAAGCTAATGTTCTGTTTACTCGGAGATTT7000.9290843210384508No Hit
CATAGATGGGATTATAGGTGTGAGCCATGTCGTCAGTGTAGACCTTTTTC6940.9211207411438355No Hit
CATAGAAACAGCAAAGCCTTCCACTACCCACCTGCCTCTATGTGTAGAAC6770.8985572647757588No Hit
CATAGACCATCCCTTCTACAAGAGGCATCTATGTGTAGAACCATGTCGTC6540.8680302085130669No Hit
CATAGATCACCAGATGCCAGTTGTGCAATATGGGCTGGGTGATCTATGTG6470.8587393653026824No Hit
CATAGAAACAGCAAAGCCCTCCACCACCCACCTGCCTCTATGTGTAGAAC6380.8467939954607595No Hit
CATAGAGGCAGAGTCCAAAGTGTCCTGGGAAAGGTATGTGGCACATCTAT6040.8016670427246062No Hit
CATAGAGTGCTCTCTTTCCCCACCCTGACTTGGTCTCATAGAGGAGAATG5870.7791035663565294No Hit
CATAGAAACAGCAAAGCCCTCCACCAGTCCATCCAGTCCAGCTCCTTCTA5490.7286675603572993No Hit
CATAGAGCAGCATTTCTCTCCAAGGAGGAGCTGACTTACTGTTCTATGTG5450.7233585070942224No Hit
CATAGATACCTGTCCTCTGCCTCGAGGAGAATGATATTGTTGCAGATTTC4950.6569953413057616No Hit
CATAGATGGGAGTTTCTAGCTTTGGTCTGTTTACTCGGAGATTTGACTGT4800.6370863915692234No Hit
CATAGAGTGCTCTCTTTCCCCACCCTTTGTCCATCCAGTCCAGCTCCTTC4680.6211592317799928No Hit
CATAGACCATCCCTTCTACAAGAGGCAGGGCAGAGAGTGTGTTGTATTCT4420.5866503855699933No Hit
CATAGAAACAGCAAAGCCCTCCACCATACGGAAGACACAGCACACTCTTC4230.5614323825703782No Hit
CATAGAGTGCTCTCTTTCCCCACCCTTCCACTACCCACCTGCCTCTATGT3700.4910874268346097No Hit
CATAGAGCTCCAAGATTTTTAGCTGTTCTCTATGTGTAGAACCATGTCGT3660.4857783735715328No Hit
CATAGATCCCATACTCCTCCATTACCCTAACCTCCCACCCCAGCTGTCTA3610.4791420569926868No Hit
CATAGATGGGATTATAGGTGTGAGCCATGTCGTCAGTGTGAGGAGAATGA3580.4751602670453791No Hit
CATAGATGGGATTATAGGTGTGAGCCATGTCGTCAGTGTAGGAAACATTG3380.44861500072999483No Hit
CATAGACACAGGCCAATCTCAGCAGACCTTTTTCTGTAGTCAAGTGATCT3230.42870605099345654No Hit
CATAGAGGCAGAGTCCAAAGTGTCCTTGTAGATGTGCAATATGGGCTGGG3090.4101243645726876No Hit
CATAGAGGTGGTGGGTACTTGTAGTCCCATGATCTATGTGTAGAACCATG3080.40879710125691837No Hit
CATAGATGGGAGTTTCTAGCTTTGGTCTTGCTCCTTCTCACACAAATCTA3040.40348804799384147No Hit
CATAGATGGGATTATAGGTGTGAGCCATGTCGTCAGTGCAGGGCAGAGAG3040.40348804799384147No Hit
CATAGATCTCCCTAATTAACTAAGCTAATGTTCTATGTGTAGAACCATGT2820.37428825504691876No Hit
CATAGACCACACACACAACTGAGAGTCACTGAGCTGAGGGTCACTTCTAT2770.3676519384680727No Hit
CATAGACATGATGTGCTATGAAGTTAGAGGAGGAGCTGACTTACTGTTCT2770.3676519384680727No Hit
CATAGAGCTCCAAGATTTTTAGCTGTTCTATCCCCAGGTAGCAAAACAGA2630.3490702520473037No Hit
CATAGAGCTCCAAGATTTTTAGCTGTTCTCACTGAGCTGAGGGTCACTTC2470.32783403899499625No Hit
CATAGATGGGAGTTTCTAGCTTTGGTCTATGTGAGAAGTGTATTAATTAT2440.3238522490476886No Hit
CATAGAAAAAGAACTGAGGAAAGGCAACGGCAACATATCAGAAGCATCTA2430.32252498573191934No Hit
CATAGAGTGATCCTCCTTTCTCAGCCACATAGACCTTTTTCTGTAGTCAA2390.3172159324688425No Hit
CATAGATGAGTGTCCTTGTAGATGTGCAGGGCAGAGAGTGTGTTGTATTC2390.3172159324688425No Hit
CATAGAGGTTTTCTGTTTCTGTGTTAGTTTGCTTCTGTTTACTCGGAGAT2370.3145614058373041No Hit
CATAGAGTGCTCTCTTTCCCCACCCCAGGTAGCAAAACAGAGTCTATGTG2330.3092523525742272No Hit
CATAGACGAAATGTACAGGTTGCTAAGTTGAAGCAGAGGTAGATGGATCA2320.307925089258458No Hit
CATAGACACACTGACAATTTGCACCTGTACGGAAGACACAGCACACTCTT2320.307925089258458No Hit
CATAGAGCTCCAAGATTTTTAGCTGTTCTATGCCCCAGGTAGCAAAACAG2320.307925089258458No Hit
CATAGAGTGATCCTCCTTTCTCAGCTTACACTGCACATGGGGTCTATGTG2320.307925089258458No Hit
CATAGAGCTCCAAGATTTTTAGCTGTTCTCATGGTTCTAGCACTATTCTC2300.30527056262691954No Hit
CATAGAGCTCCAAGATTTTTAGCTGTTCTCTATGGCATTCTCTCAGGGCT2280.3026160359953811No Hit
CATAGAGGCACGATCTTGTTTCACTGTGCTGAGGGTCACTGACAGGTCTT2260.2999615093638427No Hit
CATAGATATTCTGCCCCCTCCTCTCCACACTGGGAAAGGTATGTGGCACA2170.2880161395219198No Hit
CATAGATGGGATTATAGGTGTGAGCCATGTCGTCAGTGTAGCTTACACTG2150.2853616128903813No Hit
CATAGACCATCCCTTCTACAAGAGGCACAGGAATCTTTGGGAGGCTATTA2140.2840343495746121No Hit
CATAGAGGCAGAGTCCAAAGTGTCCTTGTAGAAGTGTATTAATTATCTAT2110.28005255962730446No Hit
CATAGACACAGGCCAATCTCAGCAGAAGTGTATTAATTATCTATGGCTGC2070.27474350636422756No Hit
CATAGATCCCATACTCCTCCATTACCCTTCCACTACCCACCTGCCTCTAT2060.27341624304845835No Hit
CATAGAGCTCCAAGATTTTTAGCTGTTCTACACGGCAACATATCAGAAGC2000.2654526631538431No Hit
CATAGACCAAGAGTTGACAAGGATCTGGAGGAGAATGATATTGTTGCAGA2000.2654526631538431No Hit
CATAGATGAGTGTCCTTGTAGATGTGCAGAACCATGTCGTCAGTGTTGTA1960.26014360989076624No Hit
CATAGATACCTGTCCTCTGCCTCTAGCCAAATTCCTTACCGATCTATGTG1950.25881634657499697No Hit
CATAGAGGTTTTCTGTTTCTGTGTTAGTTTGCTACGATAGCGAGAAGAGT1940.2574890832592278No Hit
CATAGAGCAGCATTTCTCTCCAAGGAATCTTTGGGAGGCTATTAGTCTAT1940.2574890832592278No Hit
CATAGATGGGAGTTTCTAGCTTTGGTCTATGTGTACCCCAGGTAGCAAAA1930.2561618199434586No Hit
CATAGAGGCACAGGGATAATGAGGGAGAGGAGAATGATATTGTTGCAGAT1920.25483455662768933No Hit
CATAGAAACAGCAAAGCCCTCCACCAGGAAACATTGGAAAGATGGGGATC1900.25218002999615097No Hit
CATAGATATTCTGCCCCCTCCTCTCCAGAAGTGTATTAATTATCTATGGC1900.25218002999615097No Hit
CATAGATGGGATTATAGGTGTGAGCCATGTCGTCAGTGTACTTTTCTAAT1890.2508527666803817No Hit
CATAGAGTCCTTCCCTCTCACACATGTCTATGTGTAGCAATGCCTCACAC1860.24687097673307407No Hit
CATAGACGAAATGTACAGGTTGCTAAGTTAATTAGGAGGAGCTGACTTAC1820.24156192346999722No Hit
CATAGATCCCATACTCCTCCATTACCCTGGCCATGCTGAAGTCCCATGAT1770.23492560689115116No Hit
CATAGAAAAAGAACTGAGGAAAGGCAACATATCAGAAGCATCTATGTGTA1710.22696202699653586No Hit
CATAGATGGGATTATAGGTGTGAGCCATGTCGTCAGTGTACGGCAACATA1710.22696202699653586No Hit
CATAGACACACTGACAATTTGCACCTGGCCAAAAATTTCCATCTATGTGT1700.22563476368076663No Hit
CATAGATCACCAGATGCCAGTTGTGCGTGTGGTCCTCTAGCCAAATTCCT1670.22165297373345896No Hit
CATAGAGCAGCATTCTCTCAGGGCTGTTCTCTATGTGTAGAACCATGTCG1660.22032571041768978No Hit
CATAGATGGGATTATAGGTGTGAGCCATGTCGTCAGTGTGTCTTCAGCTC1650.21899844710192057No Hit
CATAGAGGCAGAGTCCAAAGTGTCCTACGGAAGACACAGCACACTCTTCT1640.21767118378615133No Hit
CATAGACGAATTGCCCATGTCAGTAAATCTACGGCAACATATCAGAAGCA1640.21767118378615133No Hit
CATAGAGCCCCCAGAGAAGAATGACCAGAGGAGAATGATATTGTTGCAGA1620.21501665715461293No Hit
CATAGAGGTGAGCGGCTGTCTCCATGCTGAAGTCCCATGATCTATGTGTA1600.21236213052307448No Hit
CATAGAGTCCTTCCCTCTCACACATGTCTTCAGCTCTTTGAGGCATCTAT1590.21103486720730527No Hit
CATAGAGCTCCAAGATTTTTAGCTGTTCTCTATGTGTAGAACCAGCATTC1560.20705307725999764No Hit
CATAGATGGGATTATAGGTGTGAGCCATGTCGTCAGTGTGGGGAAAAGGG1480.1964349707338439No Hit
CATAGACCACACACACAACTGAGAGTACGATAGCGAGAAGAGTGGAGGCT1480.1964349707338439No Hit
CATAGAGGCACAGGGATAATGAGGGAGATAGGAAACATTGGAAAGATGGG1460.19378044410230547No Hit
CATAGAGGTGAGCGGCTGTCTCCATCCAGTCCAGCTCCTTCTATGTGTAG1460.19378044410230547No Hit
CATAGAGTGCTCTCTTTCCCCACCCTGGGTAGAGAGTTCTGTAGATGTTC1450.19245318078653625No Hit
CATAGAGCCCCCAGAGAAGAATGACCGCCCCCAGAGGAGAATGATATTGT1430.18979865415499783No Hit
CATAGAAAAAGAACTGAGGAAAGGCAACTTATCTGGGCACGGTGGTCTAT1430.18979865415499783No Hit
CATAGATGGGATTATAGGTGTGAGCCATGTCGTCAGTGTGGTCACTGACA1420.1884713908392286No Hit
CATAGAAACAGCAAAGCCCTCCACCAACACTGTCTTCAGCTCTTTGAGGC1420.1884713908392286No Hit
CATAGAGGCAGAGTCCAAAGTGTCCTACGGCAACATATCAGAAGCATCTA1390.18448960089192096No Hit
CATAGAGCTCCAAGATTTTTAGCTGTTCTCCATTCTCTCAGGGCTGTTCT1350.17918054762884408No Hit
CATAGATGGGATTATAGGTGTGAGCCATGTCGTCAGTGAGGAGGAGCTGA1320.17519875768153642No Hit
CATAGAGTCCTTCCCTCTCACACATGTCGTCAGTGTAGCTTACACTGCAC1320.17519875768153642No Hit
CATAGATATTCTGCCCCCTCCTCTCCCCAGGTAGCAAAACAGAGTCTATG1320.17519875768153642No Hit
CATAGATGGGATTATAGGTGTGAGCCATGTCAGGAAACATTGGAAAGATG1310.17387149436576724No Hit
CATAGAGGTGAGCGGCTGTCTCCAGTGTCTGTTTACTCGGAGATTTGACT1310.17387149436576724No Hit
CATAGAGGTGGTGGGTACTTGTAGTCCTACGGCAACATATCAGAAGCATC1300.172544231049998No Hit
CATAGATGGGATTATAGGTGTGAGCCATGTCTTCAGCTCTTTGAGGCATC1300.172544231049998No Hit
CATAGAGGTGAGCGGCTGTCTCCATTCTCTCAGGGCTGTTCTCTATGTGT1290.1712169677342288No Hit
CATAGAGCCCCCAGAGAAGAATGACCAGAGAACAATGCCTCACACACAGG1270.16856244110269036No Hit
CATAGAAGTACCATCAGAGTGAACAGGTCACTGACAGGTCTTAAAGCTCT1230.1632533878396135No Hit
CATAGAGTGCTCTCTTTCCCCACCCTGACGCATTCTCTCAGGGCTGTTCT1210.16059886120807507No Hit
CATAGAAAAAGAACTGAGGAAAGGCAACATATCAGAAGCATCTATACGGC1200.15927159789230586No Hit
CATAGACCATCCCTTCTACAAGAGGCACGATCTTGTTTCACTGAGCTGAG1130.14998075468192135No Hit
CATAGAGGCACGATCTTGTTTCACTGTCATAGGGCACTGAGACCACATCT1120.14865349136615214No Hit
CATAGAGGCAGAGTCCAAAGTGTCCTAGTTGTCTTCAGCTCTTTGAGGCA1100.1459989647346137No Hit
CATAGACGAAATGTACAGGTTGCTAAGTTGAGTGATCTACAGTTTCAATA1080.14334443810307526No Hit
CATAGATGGGATTATAGGTGTGAGCCATGTCGTCAGTGTGAAGCAGAGGT1060.14068991147153684No Hit
CATAGAGCTCCAAGATTTTTAGCTGTTCTATGTGTCTGTTTACTCGGAGA1060.14068991147153684No Hit
CATAGAGTGAAACCCTGTCTCTACCAACCGTAGCCATGCTGAAGTCCCAT1040.13803538483999842No Hit
CATAGAGGAGTGACTTTTGTTGCTGCAGACTTGGTCTCATAGAGGAGAAT1030.13670812152422918No Hit
CATAGATGGGATTATAGGTGTGAGCCATGTCGTCAGTGTAGAAGTGTATT970.1287445416296139No Hit
CATAGAGCCCCCAGAGAAGAATGACCTCTAGCCAAATTCCTTACCGATCT960.12741727831384467No Hit
CATAGAGCTCCAAGATTTTTAGCTGTTCTCTAGCATTCTCTCAGGGCTGT940.12476275168230624No Hit
CATAGAGCTCCAAGATTTTTAGCTGTTCTATGTCTGTTTACTCGGAGATT880.11679917178769096No Hit
CATAGAGGTGAGCGGCTGTCTCCAGTCCAGTCCATCCAGTCCAGCTCCTT870.11547190847192175No Hit
CATAGAGGCAGAGTCCAAAGTGTCCTTCCACTACCCACCTGCCTCTATGT870.11547190847192175No Hit
CATAGAGGTGAGCGGCTGTCTCCACCCCAGGTAGCAAAACAGAGTCTATG860.11414464515615254No Hit
CATAGATGGGAGTTTCTAGCTTTGGTCTCATAGATGGGAGTTTCTAGCAC850.11281738184038331No Hit
CATAGATCTCCCTAATTAACTAAGCTAATGTTCTGAAGCAGAGGTAGATG830.11016285520884489No Hit
CATAGAGCTCCAAGATTTTTAGCTGTTCTGTTTACTCGGAGATTTGACTG830.11016285520884489No Hit
CATAGATGGGAGTTTCTAGCTTTGGTCTCATAGAGGAGAATGATATTGTT820.10883559189307566No Hit
CATAGAGGCACGATCTTGTTTCACTGTGCTGAGGGTCACTTCTATGTGTA810.10750832857730647No Hit
CATAGATCTCCCTAATTAACTAAGCTAATGTTCTGGTCTCATAGATCTCC790.10485380194576802No Hit
CATAGATCTCCCTAATTAACTAAGCTAATGTTCTATAGGAGGAGCTGACT780.10352653862999882No Hit
CATAGATGGGATTATAGGTGTGAGCCATGTAGGAAACATTGGAAAGATGG770.10219927531422959No Hit
CATAGAGGCACAGGGATAATGAGGGAGATCTATAGAAGTGTATTAATTAT770.10219927531422959No Hit
CATAGACGAAATGTACAGGTTGCTAAGTTACGGTAGCTTACACTGCACAT770.10219927531422959No Hit
CATAGATGGGAGTTTCTAGCTTTGGTCTATGGGGAAAAGGGATAGGAGGG760.10087201199846037No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)