FastQCFastQC Report
Wed 28 Jun 2023
EGAF00005804593

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005804593
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences351204
Sequences flagged as poor quality0
Sequence length150
%GC43

[WARN]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
CATAGAGGTGAGCGGCTGTCTCCACAAGTCCGCGCAGAGCCTTCAGGTCA7637621.746904932745643No Hit
CATAGACCTCCTTTCCTCCACGGCAAACACTCAAAACAGCCCTCTATGTG239076.807154816004374No Hit
CATAGATACGATCATAAGGGTGGGGCGAAAGTGATCAGAAGCTCTATGTG174654.97289324722953No Hit
CATAGACACCATTGGAGACCTGAGCATCCCTCATTACTCTGGTTCTATGT152514.3424904044373065No Hit
CATAGACCAGCTTTGCATGAGTGTGGGAAGTAGGGAATGATTACAAGTTC112703.2089611735629435No Hit
CATAGACACACCCAACTCTGCTCAGTCTGCATAGCCACATCTATGTGTAG108563.0910809671871617No Hit
CATAGATGGTGGGTTCTGGAGAGAGCATCCCTCATTACTCTGGTTCTATG96122.7368708784637987No Hit
CATAGACCAGCTTTGCATGAGTGTGGTTAATGAAGCTCTTCCATGTCCCA78922.247127025888088No Hit
CATAGACCAGCTTTGCATGAGTGTGGCCTGTGTTCTTTGCATGATCTATG68251.9433149964123417No Hit
CATAGACACACCCAACTCTACTCAGTCTGCATAGCCACATCTATGTGTAG48171.3715675220099999No Hit
CATAGACTTACTGCCCTCACTCCGTCTGCATAGCCACATCTATGTGTAGA30470.8675869295338322No Hit
CATAGATGATGTGAAAAGGACCCATGGAGATGATGTGGCATGGAGAAGGG26240.7471441099759684No Hit
CATAGAGTTTGCCCTTCCTTCCCTCCACGGCAAACACTCAAAACAGCCCT23850.6790924932517853No Hit
CATAGAGTTATTCAGAGAGAGGGGAAATGAATGTTGGAGAGGCACATCTA23060.6565984442090637No Hit
CATAGAGGTGAGCGGCTGTCTCCATCAATTTAAGGTAGGCACTTCCTCTA21680.6173050420838031No Hit
CATAGACTGGCGGTGATTGCTTTCCTCCACGGCAAACACTCAAAACAGCC21490.6118950809216296No Hit
CATAGACTGGCGGTGATTGCTTTCCTGACTTGGCCTCAGTTTCCCCTCCT20600.5865536838988167No Hit
CATAGAGATGATGGGATCTTATATTTGGAAAAACTGGTAGCAAAGCTGCT20300.5780116399585427No Hit
CATAGACCTGACCTCATGATCTGCCTGTGTTCTTTGCATGATCTATGTGT19890.5663375132401681No Hit
CATAGAGGGGAGACACTGGCTATAAGAAGACACTGGGGGCACAAAGTTCT18740.5335930114691176No Hit
CATAGAGGGGAGACACTGGCTATAAGAACTTGGTCTCATAGAGGGGAGAC18720.5330235418730994No Hit
CATAGATGTTTGAAACTCCTCTACCTAAGATCTATGTGTAGAACCATGTC18060.5142310452044966No Hit
CATAGACTTACTGCCCTCACTCAGTCTGCATAGCCACATCTATGTGTAGA17980.5119531668204235No Hit
CATAGAGTTTGCCCTTCCTTCCCTCCAAGCAGATCTGTGTTCTATGTGTA15980.45500620721859664No Hit
CATAGACCAGCTTTGCATGAGTGTGGCATGGAGAAGGGTCTATGTGTAGA15740.4481725720663774No Hit
CATAGAGGGGAGACACTGGGGGCACAAAGTTCTATGTGTAGAACCATGTC15660.4458946936823043No Hit
CATAGAGTTTGCCCTTCCTTCCCTCCCATCAATTTAAGGTAGGCACTTCC15600.4441862848942495No Hit
CATAGATGACCTGTTAATCTGCCCCCATCAATTTAAGGTAGGCACTTCCT15490.441054202116149No Hit
CATAGACCTCCTTTCCTCCACGGCAAAGCTGCTATGGGATCTTCTATGTG15240.4339358321659207No Hit
CATAGAGTCTCAATTATTCATCTCAACATGCTAGGTAGCAAAGCTGCTAT15100.4299495449937928No Hit
CATAGATGATGTGAAAAGGACCCATGGCCATGCTGAAGTCCCATGATCTA14210.40460814797097977No Hit
CATAGAGTCTCAATTATTCATCTCAACATGCTCTTGGCCTCAGTTTCCCC14080.4009065955968611No Hit
CATAGACTGGCGGTGATTGCTTTCCTTTTGCTCATCCATTGTTGATCTAT13870.39492716483866924No Hit
CATAGACCAAACACAGAAGACATGGCAAACACTCAAAACAGCCCTCTATG13420.3821140989282582No Hit
CATAGACTTTTCCTCCAATATAGCTGCACTTAAGACACTGGGGGCACAAA13280.37812781175613036No Hit
CATAGACTGGCGGTGATTGCTTTCCTGATGTTTTAAAATGAGCACCTAAC13080.3724331157959477No Hit
CATAGAGTCTCAATTATTCATCTCAACATGCTATAGATTTATCCAGCATG13060.3718636461999294No Hit
CATAGAGGGGAGACACTGGCTATAAGAAGAGGGGAGACACTGGGGGCACA12890.3670231546337741No Hit
CATAGAGTTTGCCCTTCCTTCCCTCCATCAATTTAAGGTAGGCACTTCCT12620.3593353150875275No Hit
CATAGAGGGGAGACACTGGCTATAAGAAGGGGAGACACTGGGGGCACAAA12530.35677270190544524No Hit
CATAGATGATGTGAAAAGGACCCATGGGACTTGGCCTCAGTTTCCCCTCC12470.35506429311739046No Hit
CATAGAGTTATTCAGAGAGAGGGGAAATGAGACACTGGGGGCACAAAGTT12260.34908486235919867No Hit
CATAGAGTCTCAATTATTCATCTCAACATGCTACTTGGCCTCAGTTTCCC11750.3345633876607328No Hit
CATAGAGTTTGCCCTTCCTTCCCTCCTTGGCCTCAGTTTCCCCTCCTTCT11530.32829922210453183No Hit
CATAGATGATGTGAAAAGGACCCATGGCGTCAGTGTACCAGTGTAGCAGA11480.32687554811448616No Hit
CATAGAGGGGAGACACTGGCTATAAGAATAGAGGGGAGACACTGGGGGCA11280.3211808521543035No Hit
CATAGAAGAAAGTAGTACTCTCCTCATTCTTGAGTCTATGGCAAAGCTGC11240.3200419129622669No Hit
CATAGAGATGATGGGATCTTATATTTGGAAAAACTAGGTAGCAAAGCTGC10840.30865252104190155No Hit
CATAGAGTTTGCCCTTCCTTCCCTCCCGGATTCAAGCAATTCTTCTATGT10520.2995410075056093No Hit
CATAGAGTCTCAATTATTCATCTCAACATGCTGAAGTTTTGAGGTAAAAC9860.2807485108370064No Hit
CATAGAAGAAAGTAGTACTCTCCTCATTCTTGATGTGGCATGGAGAAGGG9160.26081707497636697No Hit
CATAGACCAGCTTTGCATGAGTGTGGCAGACCATCACCAGTGTAGCAGAC9000.25626131820822085No Hit
CATAGAGTTTGCCCTTCCTTCCCTCCTGGCCTCAGTTTCCCCTCCTTCTA8730.24857347866197424No Hit
CATAGATGATGTGAAAAGGACCCATGGCCTCAGTTTCCCCTCCTTCTATG8710.24800400906595596No Hit
CATAGAGGGGAGACACTGGCTATAAGAAGAGACTTGGTCTCATAGAGGGG8690.2474345394699377No Hit
CATAGATGGTGGGTTCTGGAGAGAGGGCGAAAGTGATCAGAAGCTCTATG8630.2457261306818829No Hit
CATAGACCAGCTTTGCATGAGTGTGGAACACCAGTGTAGCAGACCATCTT8290.23604514754957234No Hit
CATAGACCAGCTTTGCATGAGTGTGGCATGATGTGGCATGGAGAAGGGTC8260.2351909431555449No Hit
CATAGAGATGATGGGATCTTATATTTGGAAAAACTTACGGTAGCAAAGCT8220.2340520039635084No Hit
CATAGACACACCCAACTCTGCTCAGTGTACTCAGTCTGCATAGCCACATC8200.2334825343674901No Hit
CATAGACCTGACCTCATGATCTGCCTTTTGCTCATCCATTGTTGATCTAT8030.22864204280133482No Hit
CATAGATGGTGGGTTCTGGAGAGAGACACTGGGGGCACAAAGTTCTATGT7980.22721836881128918No Hit
CATAGACCAGCTTTGCATGAGTGTGGAAGGCCTGTGTTCTTTGCATGATC7620.21696791608296034No Hit
CATAGACCAGCTTTGCATGAGTGTGGTGGCCTCAGTTTCCCCTCCTTCTA7500.2135510985068507No Hit
CATAGACACACCCAACTCTGCTCAGTGTCTTTCTGGGTAGCTGCGACCTC7190.20472431976856753No Hit
CATAGATGTTTGAAACTCCTCTACCTAAGACACTGGGGGCACAAAGTTCT7130.20301591098051275No Hit
CATAGAGTCTCAATTATTCATCTCAACATGCTGATGTGGCATGGAGAAGG6970.19846015421236662No Hit
CATAGATGATGTGAAAAGGACCCATGGTCTATGTGTAAGACAACACAGGA6630.18877917108005604No Hit
CATAGACTTACTGCCCTCACTCCGTCTACGGTAGCAAACACTCAAAACAG6570.18707076229200123No Hit
CATAGAGGGGAGACACTGGCTATAAGAAGGGAGACACTGGGGGCACAAAG6340.18052186193779116No Hit
CATAGATGGTGGGTTCTGGAGAGAGCCGGGGAAGTAGGGAATGATTACAA6240.1776745139576998No Hit
CATAGAGTCTCAATTATTCATCTCAACATGCTGGTAGCAGAGACTTGGCC6200.17653557476566328No Hit
CATAGAGGGGAGACACTGGCTATAAGAAGCAGAGACTTGGTCTCATAGAG5680.1617293652691883No Hit
CATAGAGGTGAGCGGCTGTCTCCAATGGCCATGCTGAAGTCCCATGATCT5350.15233311693488685No Hit
CATAGATGACCTGTTAATCTGCCCCCCACATAGACAACACAGGATCCAGG4950.1409437250145215No Hit
CATAGAGTTTGCCCTTCCTTCCCTCCCTTGGCCTCAGTTTCCCCTCCTTC4910.13980478582248493No Hit
CATAGAGTTTGCCCTTCCTTCCCTCCTACGGTAGCAAACACTCAAAACAG4900.1395200510244758No Hit
CATAGAGTTTGCCCTTCCTTCCCTCCGCAGAGACTTGGCCTCAGTTTCCC4760.13553376385234792No Hit
CATAGAGATGATGGGATCTTATATTTGGAAAAACTAGGGCGAAAGTGATC4750.1352490290543388No Hit
CATAGACCAGCTTTGCATGATGTGGCATGGAGAAGGGTCTATGTGTAGAA4650.13240168107424743No Hit
CATAGACTGGCGGTGATTGCTTTCCTCCACGGCAAAGCTGCTATGGGATC4550.1295543330941561No Hit
CATAGAGGTGAGCGGCTGTCTCCACAAGTCCGCGCAGGGCCTTCAGGTCA4510.12841539390211956No Hit
CAGTTTCCCCTCCTTCTATGTGTAGAACCATGTCGTCAGTGTAGATCTCG4390.12499857632600996No Hit
CATAGATGTGAGCACTACTGATAATCCCTGATGTGGCATGGAGAAGGGTC4290.12215122834591861No Hit
CATAGAGGGGAGACACTGGCTATAAGAAGACTTGGTCTCATAGAGGGGAG4240.12072755435587293No Hit
CATAGAGTCTCAATTATTCATCTCAACATGCCATGCTGAAGTCCCATGAT4240.12072755435587293No Hit
CATAGATACGATCATAAGGGTGGGGCTGGGCTCAGTGGCTTATGCCTGTA4180.11901914556781813No Hit
CATAGAGTTTGCCCTTCCTTCCCTCCACGGCAAAGCTGCTATGGGATCTT3870.11019236682953497No Hit
CATAGACTGGCGGTGATTGCTTTCCTGAGACTCAGTCTGCATAGCCACAT3790.10791448844546189No Hit
CATAGAGGCTGGGTGACTTGGTGAATGTTGGAGAGGCACATCTATGTGTA3770.10734501884944363No Hit
CATAGAGATGATGGGATCTTATATTTGGAAAAACTTTGAGGTAAAACTAT3740.10649081445541624No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)