FastQCFastQC Report
Wed 28 Jun 2023
EGAF00005804594

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005804594
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences91404
Sequences flagged as poor quality0
Sequence length150
%GC40

[FAIL]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
CATAGACGCGGTATTGTCAGGAGCTAACTGGGATACTGCTCTATGAGACC76018.315828628944029No Hit
CATAGAACTGAGGCTGGTAGAGGGAGGCGTGGTATGAGGGGAATCTATGA65187.130978950592971No Hit
CATAGACCTGGTACTTCTCTTCTGGGTCCATTTTTGGTTCTCTTCTATGA62716.860750076583082No Hit
CATAGATTACTGGGAGACTGGCGCTCACCTCTATGAGACCAAGTCTCTGC47785.2273423482560935No Hit
CATAGAGGGAAGAGAAGAGGAGCTGACATCCCAACCACACGTCTATGAGA31663.463743381033653No Hit
CATAGAAGCTGTCGTTTGTCAACTCCTGGGCCCATAATACACTTTTCTAT28383.1048969410529077No Hit
CATAGAGGATCTCAGGAGTTTAGGTGGGAGGAACAGGGAGATGTTCTATG27533.011903198984727No Hit
CATAGAAAAGTCACCATGCAGCCCTGTGATTGTCCTTGCACACCATGGAT25082.7438624130235003No Hit
CATAGAAAAGTCACCATGCAGCCCTGGGCCCATAATACACTTTTCTATGA21952.4014266334077283No Hit
CATAGACAGTCCTGCCGTGTACATGTACAGCCTACATCCCTCATCTATGA18652.0403921053783205No Hit
CATAGATTACTGGAGACAGCCGCTCACCTCTATGAGACCAAGTCTCTGCT16601.816113080390355No Hit
CATAGAACTTGTGCTTTTGGTGTCACCCGTAATCCCTCCCTTTTCTATGA13701.4988403133342088No Hit
CATAGACGCGGTATTGTCAGGAGCTGACTGGGATACTGCTCTATGAGACC13541.481335608944904No Hit
CATAGAAAAGTCACCATGCAGCCCTGGCAAAAGGGTAAGAGTTCTATGAG12341.3500503260251193No Hit
CATAGACAGTATGGGGGAAACGGCTCTCTTCCGCCTTTATCCTTCTATGA10651.165156885913089No Hit
CATAGAAGCTGTCGTTTGTCAACTCCTCCTGGGCCCATAATACACTTTTC10241.120301080915496No Hit
CATAGATGTCCCCATTCATCCTGCAAACAGAATGGGACCCATCTATGAGA9911.0841976281125554No Hit
CATAGAAAAGTCACCATGCAGCCCTGCCCTTGTCCTTGCACACCATGGAT9151.0010502822633582No Hit
CATAGAAAAGTCACCATGCAGCCCTGCCGTGTACAGCCTACATCCCTCAT8810.9638527854360859No Hit
CATAGAATTGCCTACTTTGGGACCCATCTATGAGACCAAGTCTCTGCTAC8780.9605706533630914No Hit
CATAGATCATGAATGACTCCCACTCTGTAGATTATGCTCTCTTCCGCCTT8290.9069624961708459No Hit
CATAGAATTGCCTACTTTGGGACCCATCTATGCAAACAGAATGGGACCCA8250.9025863200735198No Hit
CATAGATTACTGGGAGACAGCCGCTCACCTCTATGAGACCAAGTCTCTGC8140.8905518358058728No Hit
CATAGACCCCCATGCAACCACATCTATACAATGGGCACACTTAACACCTC7780.8511662509299375No Hit
CATAGAGCACCCAACTATCCTTCAGCATGAGAAGAATGGCCTCTATGAGA7620.8336615465406328No Hit
CATAGAGGCAAGCTAACTCTGAGATCCAGCATGAGAAGAATGGCCTCTAT7120.7789593453240558No Hit
CATAGAATTGCCTACTTTGGGACCCATGCAAACAGAATGGGACCCATCTA6950.7603605969104197No Hit
CATAGATTACTGGGAGACTGGCGCTCTCTTCCGCCTTTATCCTTCTATGA5230.572185024725395No Hit
CATAGAATTGCCTACTTTGGGACCCATCTATGAGACCAAGTCTCTGCAAA5090.5568684083847534No Hit
CATAGACGCGGTATTGTCAGGAGCTGACATCCCAACCACACGTCTATGAG4920.5382696599711172No Hit
CATAGAATTGCCTACTTTGGGACCCATCTGCAAACAGAATGGGACCCATC4800.5251411316791388No Hit
CATAGATGAAGGTCTGGAGAAAGAATGCCAGCATGAGAAGAATGGCCTCT4580.501072163143845No Hit
CATAGAAGCTGTCGTTTGTCAACTCCTATAGATTATGCTCTCTTCCGCCT4340.47481510655988796No Hit
CATAGATCATGGGACTTCAGCATGGCAAAAGGGCAAGTGTATGGTCAGTT3890.42558312546496874No Hit
CATAGACAGAACACCACACCCCTGTCCTTGTCCTTGCACACCATGGATCT3720.4069843770513325No Hit
CATAGAATCCCTGCCCTTGACCTTGGGGGAAGAGAAACAGAATCTATGAG3680.40260820095400646No Hit
CATAGATGTCCCCATTCATCCTGCAACCGTAACTCCAGTCTCGGCAACAA3670.40151415692967485No Hit
CATAGAGGCAAGCTAACTCTGAGATCCATCAGAGCATCACCCCTTCTATG3660.40042011290534335No Hit
CATAGAATTCCCCAATGTCCTGTGCAAACAGAATGGGACCCATCTATGAG3650.39932606888101174No Hit
CATAGAGGTTCTTTGTAGACTTACTTGGCAAAAGGGCAAGTGTATGGTCA3570.39057371668635943No Hit
CATAGAATTGCCTACTTTGGGACCCAGCATGAGAAGAATGGCCTCTATGA3570.39057371668635943No Hit
CATAGATGTGTGAGAGAGGGAGAGACAGCCTTCTCTGATACCATCCCTCT3560.3894796726620279No Hit
CATAGAACTGAGGCTGGTAGAGGGAGCCTTGGAGGCCTAGCCTGGCAGCT3260.3566583519320818No Hit
CATAGATCTGGGAGGTGAAGAGGACAAGCACATTATTATTGGTTGGTTCT3110.34024769156710866No Hit
CATAGACGTCTTTTGTGGGTTTTCTTTCTTGAGGTTCTTCAACACAGCTA3090.33805960351844555No Hit
CATAGAATTCCCCAATGTCCTGTGCACCTCACTTGATCATCCATTGTCTG2980.32602511925079863No Hit
CATAGATGCACCAGAAGCCACCTACCCCTTCATTTTGCTGGAACTCTATG2910.3183668110804779No Hit
CATAGATCATGGGACTTCAGCATGGCGGTGTTTGCAGATTTGGACCTGCG2800.30633232681283096No Hit
CATAGAGGGAAGAGAAGAGGAGCTGCCTGGGCCCATAATACACTTTTCTA2790.3052382827884994No Hit
CATAGATCCAGGGAGCTTTCAAGTGTCTATGAGAACAAGGGCATGGTCAA2790.3052382827884994No Hit
CATAGAAGGGCAATTATCTCATCCTAGACAGAAGGGCAAGTGTATGGTCA2780.3041442387641679No Hit
CATAGAATCCCTGCCCTTGACCTTGGGTCCATTTTTGGTTCTCTTCTATG2740.2997680626668417No Hit
CATAGATTTGGCACTCACATACACGCTGACATCCCAACCACACGTCTATG2660.2910157104721894No Hit
CATAGACAGTCCTGCCGTGTACATGTACAAACCAAACAATAGCCAGTCTA2630.2877335783991948No Hit
CATAGACCATGTAATACCATCGTGAGCAGTGCTCTCTTCCGCCTTTATCC2610.28554549035053167No Hit
CATAGATCCAGGGAGCTTTCAAGTGTCTATGAACAAGGGCATGGTCAAGT2570.28116931425320557No Hit
CATAGAATTGCCTACTTTGGGACCCATCTATGAGACCAAGTGCAAACAGA2520.27569909413154786No Hit
CATAGAATTGCCTACTTTGGGACCCATCGGCCGCACTGAAATTGTCTATG2510.2746050501072163No Hit
CATAGAGGATCTCAGGAGTTTAGGTGGGTCCATTTTTGGTTCTCTTCTAT2430.265852697912564No Hit
CATAGAATCCCTGCCCTTGTCCTTGCACACCATGGATCTATGAGACCAAG2330.25491225766924863No Hit
CATAGATCCAGGGAGCTTTCAAGTGTCGAACAAGGGCATGGTCAAGTGTC2210.24178372937727013No Hit
CATAGACAGAACACCACACCCCTGTCTTAGGAGTTCTGGCCCCTGTCTAT2180.23850159730427553No Hit
CATAGAGGGAAGAGAAGAGGAGCTGCTACCGTACTGGTGGTGCTGGAACT2150.2352194652312809No Hit
CATAGAATTCCCCAATGTCCTGTGCACACCATTGTCCTTGCACACCATGG2100.2297492451096232No Hit
CATAGATGCACCAGAAGCCACCTACCCCTTTACCTACCTTCTCAGCTCTA2060.22537306901229706No Hit
CATAGACAGAACACCACACCCCTGTCCTTAGGAGTTCTGGCCCCTGTCTA2060.22537306901229706No Hit
CATAGACCCACTTACACACACAGGTTTTCCGGCTTGAGGTTCTTCAACAC2040.22318498096363398No Hit
CATAGATGGCATGTCACTTCCTCAGAGCATCACCCCTTCATTTTGCTGGA2010.21990284889063938No Hit
CATAGACCATGTAATACCATCGTGAGCAGCACCCCTTCATTTTGCTGGAA2010.21990284889063938No Hit
CATAGAGGTTCTTTGTAGACTTACTTGGCACACTGACGACAAGGTTTTCC1990.21771476084197627No Hit
CATAGAAAAGGGCGGTGGGAAAGTTCTATGAGATGGTGAAAAGTAGGGGA1900.2078683646229924No Hit
CATAGAATTGCCTACTTTGGGACCCATCTATGAGACCAAGTCTGCAAACA1890.20677432059866088No Hit
CATAGATCATGAATGACTCCCACTCTGTTCCCTGGCAAAAGGGTAAGAGT1810.1980219684040086No Hit
CATAGATCATGGGACTTCAGCATGGCAAAAGGGTCCTGGGCCCATAATAC1790.19583388035534552No Hit
CATAGACAGAACACCACACCCCTGTCCTTGCACACCATGGATCTATGAGA1690.1848934401120301No Hit
CATAGACCCCCATGCAACCACATCTACACTGACGACATGGTTCTACACAT1610.1761410879173778No Hit
CATAGACCTGGTACTTCTCTTCTGGGTCACTGATCTAGCTTCGGAATGTT1600.17504704389304626No Hit
CATAGAGGGAAGAGAAGAGGAGCTGCTACCGTAGTGCCCTGTGATTGTCC1590.1739529998687147No Hit
CATAGACTCCTGAGTTCAAGATTCTACCCACAGCCCAGTTTTCCTTCTCT1550.16957682377138855No Hit
CATAGACAGAACACCACACCCCTGTCCACCCGCTTCTCCCGGGACACTTA1550.16957682377138855No Hit
CATAGAGGGAAGAGAAGAGGAGCTGCTACCGTACACCCGTAATCCCTCCC1550.16957682377138855No Hit
CATAGACCCACTTACACACACAGGTTTTCCGGCTTGAGGTTCTATGAGAC1540.168482779747057No Hit
CATAGAATTGCCTACTTTGGGACCCAAGTATATGACACATTACACCAGTC1540.168482779747057No Hit
CATAGATGAAGGTCTGGAGAAAGAATGCCGTCAGTGTCCACTTTGTTCCC1450.15863638352807316No Hit
CATAGAGGTTCTTTGTAGACTTACTTGGCAACATGAGGTTCTTCAACACA1400.15316616340641548No Hit
CATAGAATTGCCTACTTTGGGACCCACTTTGTTCCCTGGCTTCTCTATGA1340.14660189926042624No Hit
CATAGAAAAGTCACCATGCAGCCCTGCCCTGTGATTGTCCTGGTCTATGA1240.13566145901711085No Hit
CATAGAGAAAGGCAGGCGAAGTTAGGGCAAGTGTATGGTCAGTTCTATGA1230.1345674149927793No Hit
CATAGAATTGCCTACTTTGGGACCCATCTATGAGACTGCAAACAGAATGG1210.13237932694411622No Hit
CATAGAATCCCTGCCCTTGACCTTGCACACCATGGATCTATGAGACCAAG1200.1312852829197847No Hit
CATAGAATTGCCTACTTTGGGACCCAGTCTCTGCTACCGTACATCGGCCG1190.13019123889545314No Hit
CATAGAACTTGTGCTTTTGGTGTCACAAGCACATTATTATTGGTTGGTTC1130.12362697474946392No Hit
CATAGAGTCATTCCAAACTGTGCACTTGTCCTTGCACACCATGGATCTAT1110.12143888670080084No Hit
CATAGAATTCCCCAATGTCCTGTGCACACCATGGATCTATGAGACCAAGT1100.1203448426764693No Hit
CATAGATGTGTGAGAGAGGGAGAGACAGTGTTGTACAAACCAAACAATAG1050.1148746225548116No Hit
CATAGATCCAGGGAGCTTTCAAGTGTCTATGAGACCAAGTCGAACAAGGG1010.11049844645748545No Hit
CATAGAAAAGTCACCATGCAGCCCTGGTGGTGCTGGAACTAGTTCTATGA1000.10940440243315391No Hit
CATAGAGGTTCTTTGTAGACTTACTTGGCAAAAGGGTAAGAGTTCTATGA980.10721631438449084No Hit
CATAGAATTGCCTACTTTGGGACCCATCTATGTGCAAACAGAATGGGACC970.1061222703601593No Hit
CATAGAGCACCCAACTATCCTTCAGCACCCAACTATCCATCAGAGCATCA940.10284013828716466No Hit
CATAGAATCCCTGCCCTTGACCTTGGACACTGAGGTTCTTCAACACAGCT940.10284013828716466No Hit
CATAGACAGAACACCACACCCCTGTCTATGAGACGAGCTGAGGTTCTTCA930.10174609426283313No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)