FastQCFastQC Report
Wed 28 Jun 2023
EGAF00005804595

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005804595
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences91404
Sequences flagged as poor quality0
Sequence length150
%GC38

[FAIL]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
CATAGAGCAGTATCCCAGTTAGCTCCTGACAATACCGCGTCTATGTGTAG76868.408822371012208No Hit
CATAGATTCCCCTCATACCACGCCTCCCTCTACCAGCCTCAGTTCTATGT64717.0795588814493895No Hit
CATAGAAGAGAACCAAAAATGGACCCAGAAGAGAAGTACCAGGTCTATGT62896.88044286902105No Hit
CATAGAGGTGAGCGCCAGTCTCCCAGTAATCTATGTGTAGAACCATGTCG45895.020568027657433No Hit
CATAGACGTGTGGTTGGGATGTCAGCTCCTCTTCTCTTCCCTCTATGTGT31123.40466500371975No Hit
CATAGAAAAGTGTATTATGGGCCCAGGAGTTGACAAACGACAGCTTCTAT28013.0644173121526412No Hit
CATAGAACATCTCCCTGTTCCTCCCACCTAAACTCCTGAGATCCTCTATG27422.9998687147170804No Hit
CATAGATCCATGGTGTGCAAGGACAATCACAGGGCTGCATGGTGACTTTT25012.7362041048531793No Hit
CATAGAAAAGTGTATTATGGGCCCAGGGCTGCATGGTGACTTTTCTATGT21732.377357664872435No Hit
CATAGATGAGGGATGTAGGCTGTACATGTACACGGCAGGACTGTCTATGT18572.031639753183668No Hit
CATAGAGGTGAGCGGCTGTCTCCAGTAATCTATGTGTAGAACCATGTCGT18251.9966303444050588No Hit
CATAGAAAAGGGAGGGATTACGGGTGACACCAAAAGCACAAGTTCTATGT13681.4966522252855454No Hit
CATAGAGCAGTATCCCAGTCAGCTCCTGACAATACCGCGTCTATGTGTAG13411.467113036628594No Hit
CATAGAACTCTTACCCTTTTGCCAGGGCTGCATGGTGACTTTTCTATGTG12221.3369217977331407No Hit
CATAGAAGGATAAAGGCGGAAGAGAGCCGTTTCCCCCATACTGTCTATGT10611.160780709815763No Hit
CATAGAAAAGTGTATTATGGGCCCAGGAGGAGTTGACAAACGACAGCTTC10111.106078508599186No Hit
CATAGATGGGTCCCATTCTGTTTGCAGGATGAATGGGGACATCTATGTGT9841.0765393199422344No Hit
CATAGATCCATGGTGTGCAAGGACAAGGGCAGGGCTGCATGGTGACTTTT9171.0032383703120213No Hit
CATAGATGAGGGATGTAGGCTGTACACGGCAGGGCTGCATGGTGACTTTT8670.9485361690954444No Hit
CATAGAGGTGAGCGGCTGTCTCCCAGTAATCTATGTGTAGAACCATGTCG8330.9113386722681721No Hit
CATAGATGGGTCCCATTCTGTTTGCATAGATGGGTCCCAAAGTAGGCAAT8150.8916458798302043No Hit
CATAGAAGGATAAAGGCGGAAGAGAGCATAATCTACAGAGTGGGAGTCAT8120.8883637477572098No Hit
CATAGAGGTGTTAAGTGTGCCCATTGTATAGATGTGGTTGCATGGGGGTC7730.8456960308082797No Hit
CATAGAGGCCATTCTTCTCATGCTGAAGGATAGTTGGGTGCTCTATGTGT7520.8227211062973173No Hit
CATAGAGGCCATTCTTCTCATGCTGGATCTCAGAGTTAGCTTGCCTCTAT6950.7603605969104197No Hit
CATAGATGGGTCCCATTCTGTTTGCATGGGTCCCAAAGTAGGCAATTCTA6740.7373856723994573No Hit
CATAGAAGGATAAAGGCGGAAGAGAGCGCCAGTCTCCCAGTAATCTATGT5330.5831254649687103No Hit
CATAGATGGGTCCCAAAGTAGGCAATTCTATGTGTAGAACCATGTCGTCA5300.5798433328957157No Hit
CATAGACGTGTGGTTGGGATGTCAGCTCCTGACAATACCGCGTCTATGTG4970.5437398800927749No Hit
CATAGATGGGTCCCATTCTGTTTGCAGAGACTTGGTCTCATAGATGGGTC4940.5404577480197803No Hit
CATAGATGGGTCCCATTCTGTTTGCAGATGGGTCCCAAAGTAGGCAATTC4670.5109185593628287No Hit
CATAGAGGCCATTCTTCTCATGCTGGCATTCTTTCTCCAGACCTTCATCT4530.4956019430221872No Hit
CATAGAAGGATAAAGGCGGAAGAGAGCATAATCTATAGGAGTTGACAAAC4240.46387466631657254No Hit
CATAGAACTGACCATACACTTGCCCTTTTGCCATGCTGAAGTCCCATGAT3880.4244890814406372No Hit
CATAGATCCATGGTGTGCAAGGACAAGGACAGGGGTGTGGTGTTCTGTCT3680.40260820095400646No Hit
CATAGAAGGGGTGATGCTCTGATGGATCTCAGAGTTAGCTTGCCTCTATG3680.40260820095400646No Hit
CATAGACTTGTTGCCGAGACTGGAGTTACGGTTGCAGGATGAATGGGGAC3630.3971379808323487No Hit
CATAGATGGGTCCCATTCTGTTTGCACAGGACATTGGGGAATTCTATGTG3630.3971379808323487No Hit
CATAGATTCTGTTTCTCTTCCCCCAAGGTCAAGGGCAGGGATTCTATGTG3600.3938558487593541No Hit
CATAGAGGGATGGTATCAGAGAAGGCTGTCTCTCCCTCTCTCACACATCT3550.3883856286376964No Hit
CATAGAACTGACCATACACTTGCCCTTTTGCCAAGTAAGTCTACAAAGAA3520.3851034965647018No Hit
CATAGAGGCCATTCTTCTCATGCTGGGTCCCAAAGTAGGCAATTCTATGT3450.377445188394381No Hit
CATAGAACTAGTTCCAGCACCACCAGCTGCCAGGCTAGGCCTCCAAGGCT3220.3522821758347556No Hit
CATAGAATAGCTGTGTTGAAGAACCTCAAGAAAGAAAACCCACAAAAGAC3120.3413417355914402No Hit
CATAGAACCAACCAATAATAATGTGCTTGTCCTCTTCACCTCCCAGATCT3070.3358715154697825No Hit
CATAGAGCAGACAATGGATGATCAAGTGAGGTGCACAGGACATTGGGGAA2990.3271191632751302No Hit
CATAGAGTTCCAGCAAAATGAAGGGGTAGGTGGCTTCTGGTGCATCTATG2870.3139906349831517No Hit
CATAGAAAAGTGTATTATGGGCCCAGGCAGCTCCTCTTCTCTTCCCTCTA2800.30633232681283096No Hit
CATAGAACTGACCATACACTTGCCCTTCTGTCTAGGATGAGATAATTGCC2750.30086210669117325No Hit
CATAGAAGAGAACCAAAAATGGACCCAAGGTCAAGGGCAGGGATTCTATG2750.30086210669117325No Hit
CATAGACACTTGACCATGCCCTTGTTCTCATAGACACTTGAAAGCTCCCT2740.2997680626668417No Hit
CATAGATCCATGGTGTGCAAGGACAAGGGCAGGGATTCTATGTGTAGAAC2630.2877335783991948No Hit
CATAGACGTGTGGTTGGGATGTCAGCGTGTATGTGAGTGCCAAATCTATG2610.28554549035053167No Hit
CATAGACTGGCTATTGTTTGGTTTGTACATGTACACGGCAGGACTGTCTA2580.28226335827753707No Hit
CATAGAAGGATAAAGGCGGAAGAGAGCACTGCTCACGATGGTATTACATG2550.27898122620454247No Hit
CATAGAGGTGAGCGGCTGTCTCCACAAGTCCGCGCAGAGCCTTCAGGTCA2500.2735110060828848No Hit
CATAGACACTTGACCATGCCCTTGTTCATAGACACTTGAAAGCTCCCTGG2490.27241696205855326No Hit
CATAGACAATTTCAGTGCGGCCGATGGGTCCCAAAGTAGGCAATTCTATG2490.27241696205855326No Hit
CATAGATGGGTCCCATTCTGTTTGCACTTGGTCTCATAGATGGGTCCCAA2470.27022887400989015No Hit
CATAGAAGAGAACCAAAAATGGACCCACCTAAACTCCTGAGATCCTCTAT2420.26475865388823244No Hit
CATAGAACTAGTTCCAGCACCACCAGTACGGTAGCAGCTCCTCTTCTCTT2200.2406896853529386No Hit
CATAGACACTTGACCATGCCCTTGTTCGACACTTGAAAGCTCCCTGGATC2200.2406896853529386No Hit
CATAGACAGGGGCCAGAACTCCTAAGACAGGGGTGTGGTGTTCTGTCTAT2190.23959564132860706No Hit
CATAGATCCATGGTGTGCAAGGACAATGGTGTGCACAGGACATTGGGGAA2070.22646711303662861No Hit
CATAGACAGGGGCCAGAACTCCTAAGGACAGGGGTGTGGTGTTCTGTCTA2050.22427902498796554No Hit
CATAGAATAGCTGTGTTGAAGAACCTCAAGCCGGAAAACCTGTGTGTGTA2030.22209093693930246No Hit
CATAGAGTTCCAGCAAAATGAAGGGGTGATGCTCTGAGGAAGTGACATGC2020.2209968929149709No Hit
CATAGAGTTCCAGCAAAATGAAGGGGTGCTGCTCACGATGGTATTACATG2020.2209968929149709No Hit
CATAGAGCTGAGAAGGTAGGTAAAGGGGTAGGTGGCTTCTGGTGCATCTA2010.21990284889063938No Hit
CATAGAACCTCAAGCCGGAAAACCTTGTCGTCAGTGTGCCAAGTAAGTCT1950.21333858474465012No Hit
CATAGATGGGTCCCATTCTGTTTGCAGACTTGGTCTCATAGATGGGTCCC1870.2045862325499978No Hit
CATAGAACTGTCCCCTACTTTTCACCATCTCATAGAACTTTCCCACCGCC1860.20349218852566625No Hit
CATAGAACTCTTACCCTTTTGCCAGGGAACAGAGTGGGAGTCATTCATGA1810.1980219684040086No Hit
CATAGAAAAGTGTATTATGGGCCCAGGACCCTTTTGCCATGCTGAAGTCC1790.19583388035534552No Hit
CATAGATCCATGGTGTGCAAGGACAGGGGTGTGGTGTTCTGTCTATGTGT1670.18270535206336702No Hit
CATAGATGAAAACATTCCGAAGCTAGATCAGTGACCCAGAAGAGAAGTAC1600.17504704389304626No Hit
CATAGAGCTTCAGATTCCATAAGTCATCCTTCTGCTCTCGGTGAACATGG1590.1739529998687147No Hit
CATAGACCAGGACAATCACAGGGCACTACGGTAGCAGCTCCTCTTCTCTT1560.1706708677957201No Hit
CATAGAAAAGGGAGGGATTACGGGTGTACGGTAGCAGCTCCTCTTCTCTT1550.16957682377138855No Hit
CATAGAACCTCAAGCCGGAAAACCTGTGTGTGTAAGTGGGTCTATGTGTA1510.16520064767406242No Hit
CATAGAGAAGGAAAACTGGGCTGTGGGTAGAATCTTGAACTCAGGAGTCT1490.16301255962539932No Hit
CATAGACTGGTGTAATGTGTCATATACTTGGGTCCCAAAGTAGGCAATTC1470.16082447157673624No Hit
CATAGAGAAGCCAGGGAACAAAGTGGACACTGACGGCATTCTTTCTCCAG1440.15754233950374164No Hit
CATAGAATAGCTGTGTTGAAGAACCTCATGTTGCCAAGTAAGTCTACAAA1400.15316616340641548No Hit
CATAGAGAAGCCAGGGAACAAAGTGGGTCCCAAAGTAGGCAATTCTATGT1350.14769594328475777No Hit
CATAGACCAGGACAATCACAGGGCAGGGCTGCATGGTGACTTTTCTATGT1240.13566145901711085No Hit
CATAGAACTGACCATACACTTGCCCTAACTTCGCCTGCCTTTCTCTATGT1230.1345674149927793No Hit
CATAGAAGGGGTGATGCTCTGATGGATAGTTGGGTGCTGAAGGATAGTTG1220.13347337096844777No Hit
CATAGACAATTTCAGTGCGGCCGATGTACGGTAGCAGAGACTGGGTCCCA1220.13347337096844777No Hit
CATAGATGGGTCCCATTCTGTTTGCAGTCTCATAGATGGGTCCCAAAGTA1210.13237932694411622No Hit
CATAGATCCATGGTGTGCAAGGTCAAGGGCAGGGATTCTATGTGTAGAAC1190.13019123889545314No Hit
CATAGAACCAACCAATAATAATGTGCTTGTGACACCAAAAGCACAAGTTC1130.12362697474946392No Hit
CATAGATCCATGGTGTGCAAGGACAAGTGCACAGTTTGGAATGACTCTAT1100.1203448426764693No Hit
CATAGACTGGCTATTGTTTGGTTTGTACAACACTGTCTCTCCCTCTCTCA1040.11378057853048007No Hit
CATAGAACTAGTTCCAGCACCACCAGGGCTGCATGGTGACTTTTCTATGT1010.11049844645748545No Hit
CATAGAACTCTTACCCTTTTGCCAAGTAAGTCTACAAAGAACCTCTATGT1010.11049844645748545No Hit
CATAGACACTTGACCATGCCCTTGTTCGACTTGGTCTCATAGACACTTGA990.10831035840882237No Hit
CATAGAATAGCTGTGTTGAAGAACCTCAGTGTCCAAGGTCAAGGGCAGGG970.1061222703601593No Hit
CATAGATTCCCCTCATACCACGCCTCAGTTCTATGTGTAGAACCATGTCG970.1061222703601593No Hit
CATAGAATAGCTGTGTTGAAGAACCTCAGCTCGTCTCATAGACAGGGGTG940.10284013828716466No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)