FastQCFastQC Report
Wed 28 Jun 2023
EGAF00005804597

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005804597
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences103336
Sequences flagged as poor quality0
Sequence length150
%GC45

[WARN]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
CATAGAGGTGAGCGGCTGTCTCCACAAGTCCGCGCAGAGCCTTCAGGTCA3476333.640744754974065No Hit
CATAGACCATCCTCCCACCTTGACCTCCCAAAGTGCTGTGATTACAGGTG47834.62859022992955No Hit
CATAGATTGCACATAAAGTCTGATCCCATCTCAAGTCTCACTCTTCTATG46974.5453665711852596No Hit
CATAGACTACCACTACCCAGCACAGGAGCACCCTCTATGTGTAGAACCAT31493.047340713788031No Hit
CATAGAGCCTGGCATTTGAGGTAAGGCTTGTGAGGGCTGAAGTCTATGTG22622.188975768367268No Hit
CATAGATCCCAGGCTTTAGAAAATATACCAAGGCTTGTGAGGGCTGAAGT18471.7873732290779591No Hit
CATAGAGATGTCAAGAGCAATGCCCAGCCACCCCATCCTACATGTGTCTA17111.6557637222265231No Hit
CATAGAGAATACAATGAACTGTGATGGCACAATACTCCTATGTAATGTCT16751.6209259115893784No Hit
CATAGAAGCAGCATTGATCATCCTCCACCCCATCCTACATGTGTCTATGT15171.4680266315707982No Hit
CATAGACTACCACTACCCAGTACAGGAGCACCCTCTATGTGTAGAACCAT12851.2435162963536426No Hit
CATAGACCATCCTCCCACCTTGACCTCCCAAAGTGCTGGGATTACAGGTG11131.0770689788650616No Hit
CATAGACTACCACCACCCAGTACAGGAGCACCCTCTATGTGTAGAACCAT9980.9657815282186266No Hit
CATAGACCATCCTCCCACCTTGACCTCCCAAAGTGCTATTACTACAGGTG9440.9135248122629093No Hit
CATAGATCCCAGGCTTTAGAAAATATACCATGTCGTCAGTGTACTCCTAT9270.8970736239064799No Hit
CATAGACCATCCTCCCACCTTGACCTCCCAGAGTGCTGGAATTATAGGCG7790.7538515135093288No Hit
CATAGAGCCTGGCATTTGAGGTAAGGAACACAGGTGGATTTGGAAGCTGC7640.7393357590771852No Hit
CATAGACTCAAGAAACTTACAATCATGGCAGAAGGTGTAAGGGAAGCCAC6650.6435317798250368No Hit
CATAGACTCAAGAAACTTACAATCATGGCAGAAAGTGAAGGAGAGGCCAC6620.640628628938608No Hit
CATAGAGATGTCAAGAGCAATGCCCGGCCACATTATTTTCTATGTGTAGA5420.5245025934814586No Hit
CATAGACCATCCTCCCACCTTGACCTCCCAAAGTGCTGGGATTACAGGCG5140.49740651854145695No Hit
CATAGACCATCCTCCCACCTTGACCTCCCAAAGTGCTGGGATTACAGGCA4860.47031044360145546No Hit
CATAGAGGGACGGAGGCAAGAGGATAGGGATAGTTTGAGGGTAATGCTCT4850.46934272663931254No Hit
CATAGACCATCCTCCCACCTTGACCTTCCAAAGTGCTAGGATAATAGGTG4390.42482774638073856No Hit
CATAGAGATGTCAAGAGCAATGCCCAGCCACATTATTTTCTATGTGTAGA4200.40644112410002325No Hit
CATAGACTCAAGAAACTTACAATCATGGCAGTGTAAGGCTTGTGAGGGCT4010.3880545018193079No Hit
CATAGAAGGTGATAATCATGACAGCCAACTGATCTTTGACAAAGCAAACA3840.3716033134628784No Hit
CATAGACCATCCTCCCACCTTGACCTCCCAACAGGTACTGGGATTACAGG3840.3716033134628784No Hit
CATAGACCATCCTCCCACCTTGACCTCCCAAAGTGCTGGGATTACAGGAG3820.3696678795385926No Hit
CATAGAAGCAGCATTGATCATCCTCCACCCAGTACAGGAGCACCCTCTAT3810.3687001625764496No Hit
CATAGATCCCAGGCTTTAGAAAATATACCATGTCGTCAGTGTAGTCTTTT3740.3619261438414493No Hit
CATAGACCATCCTCCCACCTTGACCTCTCAAAGTGCTAGGGTTACAGGCA3610.3493458233335914No Hit
CATAGACTGTTCTTTTAAATTAACACAGTCAGAGACAAGTACTCCTATGT3410.32999148409073314No Hit
CATAGATCCCAGGCTTTAGAAAATATACCATGTCGTCAGTGTGCTGTTTG3080.29805682434001707No Hit
CATAGATCCCAGGCTTTAGAAAATATACCACCACCCAGTACAGGAGCACC2900.28063791902144464No Hit
CATAGAGATGTCAAGAGCAATGCCCACCCCATCCTACATGTGTCTATGTG2820.2728961833243013No Hit
CATAGACCATCTGCGCATCCTGTCTGCTGTTTGTCTTCCATGCTTCTATG2810.2719284663621584No Hit
CATAGACCATCCTCCCACCTTGACCTCCCAAAGTGCTGAGATTACACACG2650.2564449949678718No Hit
CATAGACTCAAGAAACTTACAATCATGGCAGTGTGCTTCCCTGCTTGTCT2570.24870325927072848No Hit
CATAGAAGGTGATAATCATGACAGCCAACTGATCTTCAACAAAGCAAACA2500.24192924053572812No Hit
CATAGACCATCCTCCCACCTTGACCTCCATCTTGACCTCCCAAAGTGCTG2500.24192924053572812No Hit
CATAGATCCCAGGCTTTAGAAAATATACCAACACTGACGATGGGTTTTTG2460.23805837268715646No Hit
CATAGAGAATACAATGAACTGTGATGGCAGGCACTGCCCTGTTTACCACT2340.2264457691414415No Hit
CATAGAGCCTGGCATTTGAGGTAAGGCACTTGGTCCAGACTTTCTATGTG2240.2167685995200124No Hit
CATAGATCCCAGGCTTTAGAAAATATACCACCCAGTACAGGAGCACCCTC2230.21580088255786947No Hit
CATAGACCATCCTCCCACCTTGACCTTCCCGGTAGCTGGGACTACAGGCA2190.21193001470929781No Hit
CATAGACCATCCTCCCACCTTGACCTCCCAAAGTGTTAGGATTACAGGCA2190.21193001470929781No Hit
CATAGAACATCGCACACACATGGAACTCCTATGTAATGTCTTATTTTGTT2150.20805914686072616No Hit
CATAGACCATCCTCCCACCTTGACCTCCCAAAGTGCTGGTATTACAGGTG2140.20709142989858326No Hit
CATAGACCATCCTCCCACCTTGACCTCCCAAAGTGCTAGGATTACAAGTG2050.19838197723929707No Hit
CATAGAAGGTGATAATCATGACAGCCAATGATCTTTGACAAAGCAAACAC2000.19354339242858248No Hit
CATAGACCATCCTCCCACCTTGACCTCCCAAAGTGCTGAGATTACAGAAG1930.1867693736935821No Hit
CATAGAAGGTGATAATCATGACAGCCAAGTGATCTTTGACAAAGCCAACA1880.18193078888286754No Hit
CATAGAATTCTGTCCTATCTTGCTACTGGTACGGTAGCAGACACTCTTGG1850.1790276379964388No Hit
CATAGAAGGTGATAATCATGACAGCCACCCCATCCTACATGTGTCTATGT1810.17515677014786715No Hit
CATAGAGGTGAGCGGCTGTCTCCACAAGTCCGCGCAGAGCCTTCAGGTCG1780.1722536192614384No Hit
CATAGAGAATACAATGAACTGTGATGGCACCACTGCACTCCAGCCTGGGA1770.1712859022992955No Hit
CATAGACCATCCTCCCACCTTGACCTCCCCAGTGCTGGAATTACAGGAGT1740.16838275141286677No Hit
CATAGAGTTTTGTTCCCTTGCTGGCATGATTATCACCTTCTATGAGACAG1680.16257644964000928No Hit
CATAGAACATCGCACACACATGGAACCATGTCGTCAGTGTACTCCTATGT1680.16257644964000928No Hit
CATAGACTCAAGAAACTTACAATCATGGCAGAAGGTGAAGGGGAAGCAGG1680.16257644964000928No Hit
CATAGACCATCCTCCCACCTTGACCTCCCAAAGTGCTGAGATTACAGGCA1650.15967329875358055No Hit
CATAGAACATCGCACACACATGGAACCATGTCGTCAGTGTAGGGATAGTT1620.15677014786715182No Hit
CATAGAGGTGAGCGGCTGTCTCCACAAGTCCGCGCAGAGCCCTCAGGTCA1600.154834713942866No Hit
CATAGACCATCTGCGCATCCTGTCTGGCTTCCCTGCTTGTCTTTCATCTA1460.14128667647286522No Hit
CATAGAGGTGAGCGGCTGTCTCCATGCTGAAGTCCCATGATCTATGTGTA1450.14031895951072232No Hit
CATAGAAGGTGATAATCATGACAGCCAACTGGTCTTTGACAAAGCAAACA1410.13644809166215066No Hit
CATAGAGGTGAGCGGCTGTCTCCACAAGTCCGCGCAGAGCCTTCAGGCCA1370.132577223813579No Hit
CATAGAGCCTGGCATTTGAGGTAAGGGATCCACCCAGTACAGGAGCACCC1370.132577223813579No Hit
CATAGACCATCCTCCCACCTTGACCTCCCAAAGTACTGGGATTATAGGCG1330.12870635596500737No Hit
CATAGAGGTGAGCGGCTGTCTCCACGAGTCCGCGCAGAGCCTTCAGGTCA1320.12773863900286445No Hit
CATAGACCATCCTCCCACCTTGACCTCCCAAGTGTTGGGATTATAGGCGT1310.12677092204072155No Hit
CATAGAGGTGAGCGGCTGTCTCCACAGGTCCGCGCAGAGCCTTCAGGTCA1310.12677092204072155No Hit
CATAGACCATCCTCCCACCTTGACCTCCCAAAGTGCTGGGATGACAGGCA1310.12677092204072155No Hit
CATAGACTGTTCTTTTAAATTAACACAGTCAGAGAGGCACTTGGTCCAGA1300.12580320507857862No Hit
CATAGAAGCAGCATTGATCATCCTCCATGTGTCTATGTGTAGAACCATGT1290.12483548811643572No Hit
CATAGACCATCCTCCCACCTTGACCTCCCAAAGTGCTTGGATTACAGGTG1280.1238677711542928No Hit
CATAGAGATGTCAAGAGCAATGCCCATGCTGAAGTCCCATGATCTATGTG1260.12193233723000697No Hit
CATAGAGGTGAGCGGCTGTCTCCATAAGTCCGCGCAGAGCCTTCAGGTCA1250.12096462026786406No Hit
CATAGATCCCAGGCTTTAGAAAATATACCATGTCGTCAGTGTAGGGATAG1250.12096462026786406No Hit
CATAGAAGGTGATAATCATGACAGCCAAGCCAGGAAAGCCAGCCTGCCAA1240.11999690330572114No Hit
CATAGACCATCCTCCCACCTTGACCTCCCAAAGTGCTGGGATTATAGGCA1240.11999690330572114No Hit
CATAGAGGTGAGCGGCTGTCTCCAAGTCCGCGCAGAGCCTTCAGGTCAGA1230.11902918634357823No Hit
CATAGACCATCCTCCCACCTTGACCTCCCAAAATGCTAGGATTATAGGAG1230.11902918634357823No Hit
CATAGAGGGACGGAGGCAAGAGGATAGTTTGAGGGTAATGCTCTATGTGT1210.1170937524192924No Hit
CATAGAGGTGAGCGGCTGTCTCCACAAGTCCGCGCAGAGCCTTCGGGTCA1210.1170937524192924No Hit
CATAGAGGTGAGCGGCTGTCTCCACAAGTCCGCGCGGAGCCTTCAGGTCA1130.10935201672214911No Hit
CATAGACTCAAGAAACTTACAATCATGGCAGAAGGCGAGGGGAGCAGGCA1130.10935201672214911No Hit
CATAGAGGTGAGCGGCTGTCTCCACAAGTCTGCGCAGAGCCTTCAGGTCA1120.1083842997600062No Hit
CATAGACCATCCTCCCACCTTGACCTCTCAGAACACTGGAATTACAGGTG1090.10548114887357746No Hit
CATAGAGAATACAATGAACTGTGATGGCACTTGGTCTCATAGAGAATACA1090.10548114887357746No Hit
CATAGAAGCAGCATTGATCATCCTCCATACGGTAGCATTTTAACACAGCA1080.10451343191143454No Hit
CATAGACCATCCTCCCACCTTGACCTCCCAAAATGCTGGGATTACAGGCG1060.10257799798714873No Hit
CATAGAGGTGAGCGGCTGTCTCCACAAGTCCGCGCAGAGCCTCCAGGTCA1060.10257799798714873No Hit
CATAGAGATGTCAAGAGCAATGCCCATGCCTAGCCATTTTTGGTTCTATG1050.10161028102500581No Hit
CATAGACTACCACTACCCAGCACAGCATTTTAACACAGCATTGAAGTTCT1040.1006425640628629No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)