FastQCFastQC Report
Wed 28 Jun 2023
EGAF00005804607

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005804607
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences188376
Sequences flagged as poor quality0
Sequence length150
%GC34

[FAIL]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
CATAGAGCAGTATCCCAGTTAGCTCCTGACAATACCGCGTCTATGTGTAG108495.759226228394275No Hit
CATAGAAGAGAACCAAAAATGGACCCAGAAGAGAAGTACCAGGTCTATGT88214.682655964666412No Hit
CATAGATTCCCCTCATACCACGCCTCCCTCTACCAGCCTCAGTTCTATGT74903.976090372446596No Hit
CATAGAGGTGAGCGCCAGTCTCCCAGTAATCTATGTGTAGAACCATGTCG72503.8486856075083877No Hit
CATAGACGTGTGGTTGGGATGTCAGCTCCTCTTCTCTTCCCTCTATGTGT56933.0221471949717587No Hit
CATAGAAAAGTGTATTATGGGCCCAGGAGTTGACAAACGACAGCTTCTAT54282.881471100352486No Hit
CATAGAAAAGGGAGGGATTACGGGTGACACCAAAAGCACAAGTTCTATGT53932.8628912387989978No Hit
CATAGATGAGGGATGTAGGCTGTACATGTACACGGCAGGACTGTCTATGT49822.6447105788423153No Hit
CATAGATGGGTCCCATTCTGTTTGCAGGATGAATGGGGACATCTATGTGT41922.2253365609207116No Hit
CATAGAGGTGAGCGGCTGTCTCCAGTAATCTATGTGTAGAACCATGTCGT32411.7204951798530599No Hit
CATAGAACATCTCCCTGTTCCTCCCACCTAAACTCCTGAGATCCTCTATG30701.629719284834586No Hit
CATAGAAGGATAAAGGCGGAAGAGAGCCGTTTCCCCCATACTGTCTATGT29961.5904361489786383No Hit
CATAGAGGGATGGTATCAGAGAAGGCTGTCTCTCCCTCTCTCACACATCT27121.4396738438017582No Hit
CATAGAGGCCATTCTTCTCATGCTGAAGGATAGTTGGGTGCTCTATGTGT23931.270331677071389No Hit
CATAGAATAGCTGTGTTGAAGAACCTCAAGAAAGAAAACCCACAAAAGAC22341.1859260202998259No Hit
CATAGAAGGATAAAGGCGGAAGAGAGCATAATCTATAGGAGTTGACAAAC20451.0855947679109865No Hit
CATAGATCCATGGTGTGCAAGGACAATCACAGGGCTGCATGGTGACTTTT18961.0064976430118486No Hit
CATAGAAGGGGTGATGCTCTGATGGATCTCAGAGTTAGCTTGCCTCTATG18891.0027816707011508No Hit
CATAGAAAAGTGTATTATGGGCCCAGGGCTGCATGGTGACTTTTCTATGT18480.9810166900242069No Hit
CATAGAGCAGTATCCCAGTCAGCTCCTGACAATACCGCGTCTATGTGTAG18080.9597825625345054No Hit
CATAGAACTCTTACCCTTTTGCCAAGTAAGTCTACAAAGAACCTCTATGT17760.9427952605427442No Hit
CATAGATGAGGGATGTAGGCTGTACACGGCAGGGCTGCATGGTGACTTTT16830.8934259141291885No Hit
CATAGATCCATGGTGTGCAAGGACAAGGGCAGGGCTGCATGGTGACTTTT14590.7745148001868603No Hit
CATAGATGGGTCCCAAAGTAGGCAATTCTATGTGTAGAACCATGTCGTCA14400.7644285896292522No Hit
CATAGAACTCTTACCCTTTTGCCAGGGCTGCATGGTGACTTTTCTATGTG14250.7564657918206141No Hit
CATAGATCCATGGTGTGCAAGGACAAGGGCAGGGATTCTATGTGTAGAAC13690.7267380133350321No Hit
CATAGATGGGTCCCATTCTGTTTGCACAGGACATTGGGGAATTCTATGTG13670.725676306960547No Hit
CATAGAGGCCATTCTTCTCATGCTGGATCTCAGAGTTAGCTTGCCTCTAT13280.7049730326580881No Hit
CATAGAAAAGTGTATTATGGGCCCAGGAGGAGTTGACAAACGACAGCTTC13220.7017879135346328No Hit
CATAGAGGTGAGCGGCTGTCTCCCAGTAATCTATGTGTAGAACCATGTCG13160.6986027944111777No Hit
CATAGAGCTTCAGATTCCATAAGTCATCCTAGATCTGCTCACGATGGTAT12600.6688750159255956No Hit
CATAGAGCAGACAATGGATGATCAAGTGACACCAAAAGCACAAGTTCTAT11730.622690788635495No Hit
CATAGAACTGACCATACACTTGCCCTTTTGCCATGCTGAAGTCCCATGAT11190.594024716524398No Hit
CATAGACACTTGACCATGCCCTTGTTCGACACTTGAAAGCTCCCTGGATC11050.5865927719030025No Hit
CATAGACTGGTGTAATGTGTCATATACTTGGATCTCAGAGTTAGCTTGCC10860.5765065613453942No Hit
CATAGATGGGTCCCATTCTGTTTGCATAGATGGGTCCCAAAGTAGGCAAT10440.5542107274812078No Hit
CATAGAACTGTCCCCTACTTTTCACCATAGAACTTTCCCACCGCCCTTTT9870.5239520958083832No Hit
CATAGAGTTCCAGCAAAATGAAGGGGTGATGCTCTGAGGAAGTGACATGC9870.5239520958083832No Hit
CATAGAAGGATAAAGGCGGAAGAGAGCATAATCTACAGAGTGGGAGTCAT9740.5170510043742302No Hit
CATAGACACTTGACCATGCCCTTGTTCTCATAGACACTTGAAAGCTCCCT9290.4931626109483161No Hit
CATAGACAATTTCAGTGCGGCCGATGTGTAGAACCAATGTTTGCTATTAC8950.4751136025820699No Hit
CATAGATCCATGGTGTGCAAGGACAAGTGCACAGTTTGGAATGACTCTAT8630.45812630059030873No Hit
CATAGATTCTGTTTCTCTTCCCCCAAGGTCAAGGGCAGGGATTCTATGTG8480.45016350278167067No Hit
CATAGAGCTGAGAAGGTAGGTAAAGGGGCATAGACAGGGGTGTGGTGTTC8450.44857094321994306No Hit
CATAGAACTGACCATACACTTGCCCTTTTGCCAAGTAAGTCTACAAAGAA8440.44804009003270057No Hit
CATAGAACTAGTTCCAGCACCACCAGCTCATAGACACTTGAAAGCTCCCT8230.4368921731006073No Hit
CATAGATCCATGGTGTGCAAGGACAAGGACAGGGGTGTGGTGTTCTGTCT8020.425744256168514No Hit
CATAGACGTGTGGTTGGGATGTCAGCTCCTGACAATACCGCGTCTATGTG7700.40875695417675284No Hit
CATAGAACTCTTACCCTTTTGCCAGGTAAGTCTACAAAGAACCTCTATGT7530.3997324499936297No Hit
CATAGAACTGACCATACACTTGCCCTTCGTCTAGGATGAGATAATTGCCC7030.373189790631503No Hit
CATAGATCCATGGTGTGCAAGGTCAAGGGCAGGGATTCTATGTGTAGAAC6960.36947381832080517No Hit
CATAGAACTCTTACCCTTTTGCCAGGCATTCTTTCTCCAGACCTTCATCT6750.35832590138871195No Hit
CATAGACTGGTGTAATGTGTCATATACTTGGGTAGAATCTTGAACTCAGG6680.3546099290780142No Hit
CATAGATGGGTCCCATTCTGTTTGCAGAGACTTGGTCTCATAGATGGGTC6660.3535482227035291No Hit
CATAGATTCTGTTTCTCTTCCCCCAAATGTTTGCTATTACGAGGATGCTC6580.34930139720558884No Hit
CATAGAACCAACCAATAATAATGTGCTTGTAGCGTGTATGTGAGTGCCAA6560.34823969083110373No Hit
CATAGAAAAGGGAGGGATTACGGGTGCTCTGCTGAAGGATAGTTGGGTGC6250.33178324202658516No Hit
CATAGATCCATGGTGTGCAAGGACATTGGGGAATTCTATGTGTAGAACCA6230.33072153565210005No Hit
CATAGATCCATGGTGTGCAAGGACAGGGGTGTGGTGTTCTGTCTATGTGT6220.33019068246485755No Hit
CATAGAACCAACCAATAATAATGTGCTTGTACACTGCTCACGATGGTATT6080.322758737843462No Hit
CATAGATCCATGGTGTGCACAGGACATTGGGGAATTCTATGTGTAGAACC6010.3190427655327642No Hit
CATAGAACCTCAAGCCGGAAAACCTTGTCGTCAGTGTGCCAAGTAAGTCT5920.3142650868475814No Hit
CATAGATGGGTCCCATTCTGTTTGCATGGGTCCCAAAGTAGGCAATTCTA5610.2978086380430628No Hit
CATAGAGCTTCAGATTCCATAAGTCATCCTGGATCTCAGAGTTAGCTTGC5320.28241389561302926No Hit
CATAGAGGTGTTAAGTGTGCCCATTGTCGTCAGTGTGTTGATTTAGGAAG5320.28241389561302926No Hit
CATAGAGCTTCAGATTCCATAAGTCATCCTACGGTAGGTGGCTTCTGGTG5140.2728585382426636No Hit
CATAGATGGGTCCCATTCTGTTTGCACTTGGTCTCATAGATGGGTCCCAA5060.26861171274472334No Hit
CATAGAGGTGTTAAGTGTGCCCATTGTGGATCTCAGAGTTAGCTTGCCTC5030.2670191531829957No Hit
CATAGAGTTCCAGCAAAATGAAGGGGTGCTGCTCACGATGGTATTACATG4910.2606489149360853No Hit
CATAGAGGCCATTCTTCTCATGCTGGGTCCCAAAGTAGGCAATTCTATGT4900.2601180617488427No Hit
CATAGAGGTGTTAAGTGTGCCCATTGTCGTCAGTGTGGGTAGAATCTTGA4680.24843929162950695No Hit
CATAGAAGGATAAAGGCGGAAGAGAGCGCCAGTCTCCCAGTAATCTATGT4580.2431307597570816No Hit
CATAGAACTAGTTCCAGCACCACCAGTACGGTTGCAGGATGAATGGGGAC4370.23198284282498835No Hit
CATAGATGAGGGATGTAGGCTGTACACTTTCTGAAAATGTTTGCTATTAC4360.2314519896377458No Hit
CATAGAAGGGGTGATGCTCTGATGGATACGGTAGCAGCTCCTCTTCTCTT4210.22348919182910773No Hit
CATAGAAGGATAAAGGCGGAAGAGAGCATTCTTTCTCCAGACCTTCATCT4200.2229583386418652No Hit
CATAGAGCTTCAGATTCCATAAGTCATCCTGGGTAGAATCTTGAACTCAG3950.20968700896080178No Hit
CATAGAACTGACCATACACTTGCCCTGCATTCTTTCTCCAGACCTTCATC3860.20490933027561894No Hit
CATAGAAAAGTGTATTATGGGCCCAGGCAGCTCCTCTTCTCTTCCCTCTA3700.1964156792797384No Hit
CATAGAACTGACCATACACTTGCCCTCTGCTTTTACAAACTCAAGTGATT3690.19588482609249588No Hit
CATAGAAGGATAAAGGCGGAAGAGAGCATAGATGTGGTTGCATGGGGGTC3690.19588482609249588No Hit
CATAGAACCAACCAATAATAATGTGCTTGTGACACCAAAAGCACAAGTTC3600.19110714740731305No Hit
CATAGAGGGATGGTATCAGAGAAGGCTATCTTCTGCTGCACTGCTCTATG3570.18951458784558542No Hit
CATAGAGAAGCCAGGGAACAAAGTGGGCAATTGTCCTCTTCACCTCCCAG3410.18102093684970486No Hit
CATAGACGTGTGGTTGGGATGTCAGCGTGTATGTGAGTGCCAAATCTATG3340.1773049645390071No Hit
CATAGAACATCTCCCTGTTCCTCCCAGTTAGGCTACTTGGGGGTCTCTAT3310.1757124049772795No Hit
CATAGAGGCCATTCTTCTCATGCTGGTAGGTGGCTTCTGGTGCATCTATG3180.1688113135431265No Hit
CATAGATGGCCCACTGACATTTTCCTGGAACTCTATGGCTAACTTCGCCT3160.16774960716864146No Hit
CATAGACACTTGACCATGCCCTTGTTGACACTTGAAAGCTCCCTGGATCT3150.1672187539813989No Hit
CATAGAACTAGTTCCAGCACCACCAGTTAGGCTACTTGGGGGTCTCTATG3130.16615704760691383No Hit
CATAGACACTTGACCATGCCCTTGTTCATAGACACTTGAAAGCTCCCTGG3130.16615704760691383No Hit
CATAGACACTTGACCATGCCCTTGTTCGAACTTTCCCACCGCCCTTTTCT3100.16456448804518622No Hit
CATAGAGCAGAATTTTGGGGAGAGGGATGGATCTCAGAGTTAGCTTGCCT2980.1581942497982758No Hit
CATAGATGGGTCCCATTCTGTTTGCAGACTTGGTCTCATAGATGGGTCCC2920.15500913067482058No Hit
CATAGATGGGTCCCATTCTGTTTGCAGATGGGTCCCAAAGTAGGCAATTC2870.1523548647386079No Hit
CATAGAGTTCCAGCAAAATGAAGGGGACATAGATCTAGGAGTTGACAAAC2810.14916974561515267No Hit
CATAGACAGGGGCCAGAACTCCTAAGTCTCATAGACAGGGGTGTGGTGTT2800.14863889242791015No Hit
CATAGAACTGACCATACACTTGCCCTTCTATGTCTAGGATGAGATAATTG2770.14704633286618254No Hit
CATAGAGAAGCCAGGGAACAAAGTGGGTCCCAAAGTAGGCAATTCTATGT2760.14651547967894No Hit
CATAGAGAAGCCAGGGAACAAAGTGGCGGTTGCAGGATGAATGGGGACAT2760.14651547967894No Hit
CATAGAGCAGACAATGGATGATCAAGTGATCTGCTTTTACAAACTCAAGT2730.1449229201172124No Hit
CATAGAACTAGTTCCAGCACCACCAGCTCTGATGTCTCTCCCTCTCTCAC2580.13696012230857435No Hit
CATAGACACTTGACCATGCCCTTGTTCTAGACACTTGAAAGCTCCCTGGA2540.1348367095596042No Hit
CATAGAACTGACCATACACTTGCCCTTCTGCTATCTTCTGCTGCACTGCT2530.13430585637236167No Hit
CATAGAGGGATGGTATCAGAGAAGGCTACGGTAGGTGGCTTCTGGTGCAT2440.12952817768717884No Hit
CATAGATGGGTCCCATTCTGTTTGCAGCAGAGACTTGGTCTCATAGATGG2400.12740476493820868No Hit
CATAGACTTGTTGCCGAGACTGGAGTGCACAGGACATTGGGGAATTCTAT2360.12528135218923853No Hit
CATAGATTCCCCTCATACCACGCCTCAGTTCTATGTGTAGAACCATGTCG2300.12209623306578332No Hit
CATAGAGAAGCCAGGGAACAAAGTGGGCAATTCTATGTGTAGAACCATGT2270.1205036735040557No Hit
CATAGATGGGTCCCATTCTGTTTGCATTCTTTCTCCAGACCTTCATCTAT2250.11944196712957064No Hit
CATAGAACCTCAAGCCGGAAAACCTTACACTGAACGAAATTTAGGTGAGC2210.1173185543806005No Hit
CATAGAACTCTTACCCTTTTGCCAGGGAACAGAGTGGGAGTCATTCATGA2190.11625684800611544No Hit
CATAGACACTTGACCATGCCCTTGTTCTACGGTTGCAGGATGAATGGGGA2140.11360258206990276No Hit
CATAGACGTGTGGTTGGGATGTCAGCTAGCAGCTCCTCTTCTCTTCCCTC2130.1130717288826602No Hit
CATAGAAGAGAACCAAAAATGGACCCACCTAAACTCCTGAGATCCTCTAT2050.10882490338471992No Hit
CATAGAACTGACCATACACTTGCCCTGGACACTTGAAAGCTCCCTGGATC2040.1082940501974774No Hit
CATAGAACTAGTTCCAGCACCACCAGGCAGCTCCTCTTCTCTTCCCTCTA2010.10670149063574978No Hit
CATAGACAGGGGCCAGAACTCCTAAGACAGGGGTGTGGTGTTCTGTCTAT1960.10404722469953709No Hit
CATAGACGTGTGGTTGGGATGTCAGCGTATACGGTAGGTGGCTTCTGGTG1940.10298551832505204No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)