FastQCFastQC Report
Wed 28 Jun 2023
EGAF00005804609

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005804609
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences133591
Sequences flagged as poor quality0
Sequence length150
%GC41

[WARN]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
CATAGAGGTGAGCGGCTGTCTCCACAAGTCCGCGCAGAGCCTTCAGGTCA2131015.95167339117156No Hit
CATAGATGAGTGTCCTTGTAGATGTGCAATATGGGCTGGGTGATCTATGT57984.34011273214513No Hit
CATAGAAAAAGAACTGAGGAAAGGCAACCAAAATGTCAGGGGATCCTCTA50553.783937540702592No Hit
CATAGAAGGGTTGAGTCTGGAGGCTGACACCTTCCTCCAGACTCTATGTG44173.306360458414115No Hit
CATAGAGGCAGAGTCCAAAGTGTCCTCTAGCCAAATTCCTTACCGATCTA44173.306360458414115No Hit
CATAGAGGAGTGACTTTTGTTGCTGCACCTTCCACTACCCACCTGCCTCT30372.273356738103615No Hit
CATAGAGCAGCATTTCTCTCCAAGGAGGAGCTGACTTACTGTTCTATGTG28462.1303830347852775No Hit
CATAGAGCTCCAAGATTTTTAGCTGTTCTGTTTACTCGGAGATTTGACTG21731.62660658277878No Hit
CATAGAGGCACGATCTTGTTTCACTGAGCTGAGGGTCACTTCTATGTGTA17061.2770321353983427No Hit
CATAGATGGGATTATAGGTGTGAGCCACCGCGCCTGGCCAAAAATTTCCA15561.1647491223211146No Hit
CATAGAAGTACCATCAGAGTGAACAGGGCAGAGAGTGTGTTGTATTCTAT15361.1497780539108173No Hit
CATAGATGAGTGTCCTTGTAGATGTGCAGGGCAGAGAGTGTGTTGTATTC14941.1183388102491933No Hit
CATAGAGCTCCAAGATTTTTAGCTGTTCTCGCATTCTCTCAGGGCTGTTC14841.1108532760440448No Hit
CATAGATGGGATTATAGGTGTGAGCCACTGCGCCTGGCCAAAAATTTCCA14651.0966307610542627No Hit
CATAGAGGTGAGCGGCTGTCTTCAGCTCTTTGAGGCATCTATGTGTAGAA13220.9895876219206383No Hit
CATAGATCCCATACTCCTCCATTACCCTTCCACTACCCACCTGCCTCTAT12500.9356917756435688No Hit
CATAGAGGCAGAGTCCAAAGTGTCCTGGGAAAGGTATGTGGCACATCTAT11920.8922756772537073No Hit
CATAGATCACCAGATGCCAGTTGTGCAATATGGGCTGGGTGATCTATGTG10270.7687643628687562No Hit
CATAGATGGGATTATAGGTGTGAGCCACCACGCCTGGCCAAAAATTTCCA10120.7575360615610334No Hit
CATAGAAGCCTTTTGAGATCTGAGCATCTACGGCAACATATCAGAAGCAT9870.738822226048162No Hit
CATAGAAGGGTTGAGTCTGGAGGCTGACACCTTCCACTACCCACCTGCCT8790.6579784566325576No Hit
CATAGAGTGCTCTCTTTCCCCACCCTAACCTCCCACCCCAGCTGTCTATG8610.6445044950632902No Hit
CATAGAGTGCTCTCTTTCCCCACCCTAGCACTATTCTCTGGCCCGTCTAT8380.6272877663914486No Hit
CATAGAGGTGAGCGGCTGTCTCCAGCTCTTTGAGGCATCTATGTGTAGAA8310.6220478924478445No Hit
CATAGACATGATGTGCTATGAAGTTAGAGGAGAATGATATTGTTGCAGAT6910.5172504135757648No Hit
CATAGAGTGCTCTCTTTCCCCACCCTTCCACTACCCACCTGCCTCTATGT6190.4633545672986953No Hit
CATAGATCACTGATTCTGTATTTGCAAATTCTCTTGTCCATCCAGTCCAG6130.4588632467756062No Hit
CATAGATCACCAGATGCCAGTTGTGCGTGTGGTCTATGTCCATCCAGTCC5850.4379037510011902No Hit
CATAGAGCTCCAAGATTTTTAGCTGTTCTCTATGTGTAGAACCATGTCGT5820.4356580907396456No Hit
CATAGAGGCAGAGTCCAAAGTGTCCTTCCACTACCCACCTGCCTCTATGT5820.4356580907396456No Hit
CATAGAGGAGAATGATATTGTTGCAGATTTCTATGTGTAGAACCATGTCG5750.43041821679604164No Hit
CATAGATACCTGTCCTCTGCCTCGAGGAGAATGATATTGTTGCAGATTTC5670.42442978943192283No Hit
CATAGAGCCCCCAGAGAAGAATGACCAGCCCCCAGGTAGCAAAACAGAGT5510.41245293470368516No Hit
CATAGAAACAGCAAAGCCCTCCACCACCCACCTGCCTCTATGTGTAGAAC5380.402721740236992No Hit
CATAGAAGTACCATCAGAGTGAACAGGCTACGGCAACATATCAGAAGCAT5340.3997275265549326No Hit
CATAGAGCTCCAAGATTTTTAGCTGTTCTATGCCCCAGGTAGCAAAACAG5300.39673331287287317No Hit
CATAGACATGATGTGCTATGAAGTTAGAGGAATCTTTGGGAGGCTATTAG5210.3899963320882395No Hit
CATAGAAGTACCATCAGAGTGAACAGGCCCCAGGTAGCAAAACAGAGTCT5170.38700211840618004No Hit
CATAGAGCCCCCAGAGAAGAATGACCCCAGGTAGCAAAACAGAGTCTATG4930.36903683631382356No Hit
CATAGATCACTGATTCTGTATTTGCAAATTCTGTTTACTCGGAGATTTGA4820.36080274868816015No Hit
CATAGACACACTGACAATTTGCACCTGGGTAGAGAGTTCTGTAGATGTTC4800.35930564184713043No Hit
CATAGAAACAGCAAAGCCTTCCACTACCCACCTGCCTCTATGTGTAGAAC4710.35256866106249674No Hit
CATAGAGTGATCCTCCTTTCTCAGCCCCAGGTAGCAAAACAGAGTCTATG4250.3181352037188134No Hit
CATAGACGAAATGTACAGGTTGCTAAGTTGTGCTATGAAGCAGAGGTAGA4220.31588954345726883No Hit
CATAGATCCCATACTCCTCCATTACCCTGTGCCAGGAGGAGCTGACTTAC4190.3136438831957243No Hit
CATAGAAACAGCAAAGCCCTCCACCAGACTCCCCCAGGTAGCAAAACAGA3910.2926843874213083No Hit
CATAGAGGTTTTCTGTTTCTGTGTTAGTTTGCTTTCTGTTTACTCGGAGA3890.29118728058027865No Hit
CATAGAAGCCTTTTGAGATCTGAGCATCTACTACGGCAACATATCAGAAG3880.29043872715976377No Hit
CATAGAGCAGCATTTCTCTCCAAGGAGCATTCTCTCAGGGCTGTTCTCTA3870.2896901737392489No Hit
CATAGAGGCACGATCTTGTTTCACTGTCGTCAGTGTTGGGAAAGGTATGT3850.2881930668982192No Hit
CATAGACCACACACACAACTGAGAGTCGGTAACAATGCCTCACACACAGG3760.2814560861135855No Hit
CATAGACATGATGTGCTATGAAGTTAGAGGAGGAGCTGACTTACTGTTCT3760.2814560861135855No Hit
CATAGAGTGAAACCCTGTCTCTACCAAAACTACAAAACTTATCTGGGCAC3760.2814560861135855No Hit
CATAGAGCTCCAAGATTTTTAGCTGTTCTATAGGAGGAGCTGACTTACTG3590.26873067796483296No Hit
CATAGAGGTTTTCTGTTTCTGTGTTAGTTTGCTAGACTCTGTTTACTCGG3530.2642393574417438No Hit
CATAGAGGTGGTGGGTACTTGTAGTCCGTGTAGAACCATGTCGTCAGTGT3350.2507653958724764No Hit
CATAGAGTGCTCTCTTTCCCCACCCTCACTGAGCTGAGGGTCACTTCTAT3260.24402841508784273No Hit
CATAGACCAAGAGTTGACAAGGATCTGGAGGAGAATGATATTGTTGCAGA3110.23280011378011994No Hit
CATAGAGTGAAACCCTGTCTCTACCAAAAGTACCAAAACTTATCTGGGCA3000.2245660261544565No Hit
CATAGATCTCCCTAATTAACTAAGCTAATGTTCTCACTGAGCTGAGGGTC2930.21932615221085255No Hit
CATAGAAGCCTTTTGAGATCTGAGCATCTATGTGTAGAACCATGTCGTCA2860.21408627826724852No Hit
CATAGAGTGATCCTCCTTTCTCAGCCTACGGCAACATATCAGAAGCATCT2850.21333772484673372No Hit
CATAGAGTCCTTCCCTCTCACACATGTGTGACGGAAGACACAGCACACTC2840.21258917142621883No Hit
CATAGATCACCAGATGCCAGTTGTGCTACGGCAACATATCAGAAGCATCT2840.21258917142621883No Hit
CATAGAGGTGGTGGGTACTTGTAGTCCGTGTAGCTTACACTGCACATGGG2800.20959495774415943No Hit
CATAGAGGTTTTCTGTTTCTGTGTTAGTTTGCTTAGGATAATGGCTTCCA2780.2080978509031297No Hit
CATAGAAAAAGAACTGAGGAAAGGCAACTTATCTGGGCACGGTGGTCTAT2760.20660074406210002No Hit
CATAGAGGCACGATCTTGTTTCACTGTGCTGAGGGTCACTGACAGGTCTT2750.20585219064158514No Hit
CATAGAGGCACAGGGATAATGAGGGAGGAGAATGATATTGTTGCAGATTT2700.20210942353901087No Hit
CATAGAAACAGCAAAGCCCTCCACCATACGATAGCGAGAAGAGTGGAGGC2680.20061231669798113No Hit
CATAGAGGTGGTGGGTACTTGTAGTCCGTGTCGTCAGTGTCAGGGCAGAG2600.19462388933386232No Hit
CATAGAGTGCTCTCTTTCCCCACCCTACGATAGCGAGAAGAGTGGAGGCT2470.1848926948671692No Hit
CATAGATCCCATACTCCTCCATTACCCTCACTGAGCTGAGGGTCACTTCT2440.18264703460562465No Hit
CATAGAGTGATCCTCCTTTCTCAGCCTACGATAGCGAGAAGAGTGGAGGC2410.18040137434408007No Hit
CATAGAGCTCCAAGATTTTTAGCTGTTCTATCCCCAGGTAGCAAAACAGA2410.18040137434408007No Hit
CATAGAAGCCTTTTGAGATCTGAGCATCTATACGGCAACATATCAGAAGC2390.17890426750305036No Hit
CATAGACATGATGTGCTATGAAGTTAGAGGTCACTGACAGGTCTTAAAGC2380.1781557140825355No Hit
CATAGATGGGATTATAGGTGTGAGCCATCGCGCCTGGCCAAAAATTTCCA2330.17441294697996124No Hit
CATAGAGTGATCCTCCTTTCTCAGCCGTCTATGGTATAAGCTTACACTGC2320.17366439355944635No Hit
CATAGAGGTGGTGGGTACTTGTAGTCCGTGTCCCCAGGTAGCAAAACAGA2310.17291584013893152No Hit
CATAGAAACAGCAAAGCCCTCCACCAGAGGTTTTCTGTTTACTCGGAGAT2280.17067017987738695No Hit
CATAGAGCTCCAAGATTTTTAGCTGTTCTAACCTCCCACCCCAGCTGTCT2230.16692741277481268No Hit
CATAGAGGCACAGGGATAATGAGGGAGGAGGAGCTGACTTACTGTTCTAT2160.1616875388312087No Hit
CATAGATGGGAGTTTCTAGCTTTGGTCTAGGAAACATTGGAAAGATGGGG2150.16093898541069382No Hit
CATAGAGGCAGAGTCCAAAGTGTCCTTGTAGATGTGCAATATGGGCTGGG2070.154950558046575No Hit
CATAGAGGTGGTGGGTACTTGTAGTCCATCCAGTCCAGCTCCTTCTATGT2070.154950558046575No Hit
CATAGAGGTTTTCTGTTTCTGTGTTAGTTTGCGAAACAACAATGCCTCAC2070.154950558046575No Hit
CATAGAGTGATCCTCCTTTCTCAGCCCTTCTATGAGACCAGGGCAGAGAG2070.154950558046575No Hit
CATAGAGGTGGTGGGTACTTGTAGTCCGTGCAGGGCAGAGAGTGTGTTGT2040.15270489778503044No Hit
CATAGAGGCAGAGTCCAAAGTGTCCTACTCTGTTTACTCGGAGATTTGAC2010.15045923752348586No Hit
CATAGAGCTCCAAGATTTTTAGCTGTTCTCTATGTGCATTCTCTCAGGGC1990.14896213068245617No Hit
CATAGATGGGAGTTTCTAGCTTTGGTCTATAGGAATCTTTGGGAGGCTAT1980.1482135772619413No Hit
CATAGATGGGAGTTTCTAGCTTTGGTCTATGTGTAAACTTATCTGGGCAC1940.14521936357988188No Hit
CATAGAGCTCCAAGATTTTTAGCTGTTCTATGTGTAGAACCATGTCGTCA1920.14372225673885217No Hit
CATAGACATGATGTGCTATGAAGTTAGAGGCATGATGTGCTATGAAGCAG1870.1399794896362779No Hit
CATAGAGGTTTTCTGTTTCTGTGTTAGTTTGCTGAGGATAACGGCTTCCA1860.13923093621576305No Hit
CATAGAGGCAGAGTCCAAAGTGTCCTTAGACTCTGTTTACTCGGAGATTT1830.13698527595421847No Hit
CATAGACCACACACACAACTGAGAGTCACTCACTGAGCTGAGGGTCACTT1800.1347396156926739No Hit
CATAGAGGTGGTGGGTACTTGTAGTCCCCAGGTAGCAAAACAGAGTCTAT1790.13399106227215907No Hit
CATAGAGTGAAACCCTGTCTCTACCAAAAATACAAAACTTATCTGGGCAC1750.13099684859009963No Hit
CATAGAGTCCTTCCCTCTCACACATGTCGTCAGTGGAGGAGAATGATATT1700.12725408148752537No Hit
CATAGAAAAAGAACTGAGGAAAGGCAACTAGAGGAGAATGATATTGTTGC1690.1265055280670105No Hit
CATAGAAACAGCAAAGCCCTCCACCAACGGCAACATATCAGAAGCATCTA1660.12425986780546594No Hit
CATAGAGGCACGATCTTGTTTCACTGTGTAGAACCATGTCGTCAGTGTAG1630.12201420754392137No Hit
CATAGAGTGCTCTCTTTCCCCACCCTAGCTGTCTATGTGCCTCTAGCCAA1610.12051710070289166No Hit
CATAGAGGTTTTCTGTTTCTGTGTTAGTTTGCTAAGTGTAATAGCCTCTA1600.11976854728237679No Hit
CATAGAAGTACCATCAGAGTGAACAGGCCATGCTGAAGTCCCATGATCTA1560.11677433360031739No Hit
CATAGATGGGAGTTTCTAGCTTTGGTCTGAGACTTGGTCTCATAGAGGAG1550.11602578017980254No Hit
CATAGATCACCAGATGCCAGTTGTGCCATGCTGAAGTCCCATGATCTATG1480.11078590623619855No Hit
CATAGAGGCACGATCTTGTTTCACTGTGTAGAACCATGTCGTCAGTGTGA1470.11003735281568368No Hit
CATAGAGTGCTCTCTTTCCCCACCCTCTTGGTCTCATAGAGGAGAATGAT1450.10854024597465398No Hit
CATAGAGGTGAGCGGCTGTCTCCACGAGTCCGCGCAGAGCCTTCAGGTCA1440.10779169255413913No Hit
CATAGACCATCCCTTCTACAAGAGGCAGGGTCACTGACAGGTCTTAAAGC1440.10779169255413913No Hit
CATAGAGGTGGTGGGTACTTGTAGTCCGTGTCTAGCACTATTCTCTGGCC1430.10704313913362426No Hit
CATAGATATTCTGCCCCCTCCTCTCCTCTAGCCAAATTCCTTACCGATCT1430.10704313913362426No Hit
CATAGAGTGCTCTCTTTCCCCACCCCAGGTAGCAAAACAGAGTCTATGTG1380.10330037203105001No Hit
CATAGACCCCCTTGAGTTCACTGGACTGAGGGTCACTGACAGGTCTTAAA1370.10255181861053514No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)