FastQCFastQC Report
Wed 28 Jun 2023
EGAF00005804611

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005804611
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences85411
Sequences flagged as poor quality0
Sequence length150
%GC48

[WARN]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
CATAGAGGTGAGCGGCTGTCTCCACAAGTCCGCGCAGAGCCTTCAGGTCA3564441.73232955942443No Hit
CATAGATTGCACATAAAGTCTGATCCCATCTCAAGTCTCACTCTTCTATG42364.9595485359028695No Hit
CATAGACCATCCTCCCACCTTGACCTCCTGAGTAGCTGAGACCACAGGCA30483.568626991839459No Hit
CATAGACCATCCTCCCACCTTGACCTCCCAAAGTGCTGTGATTACAGGTG19802.3182025734390184No Hit
CATAGAAGCAGCATTGATCATCCTCCACCCCATCCTACATGTGTCTATGT18742.1940967791033943No Hit
CATAGACTACCACTACCCAGCACAGGAGCACCCTCTATGTGTAGAACCAT17132.0055964688389083No Hit
CATAGACTACCACTACCCAGCACAGCTACTTCTCTATGCACTTTGCCACA15721.8405123461849175No Hit
CATAGAGATGTCAAGAGCAATGCCCAGCCACCCCATCCTACATGTGTCTA9861.15441804919741No Hit
CATAGACTCAAGAAACTTACAATCATGGCAGAAGGTGTAAGGGAAGCCAC9541.116952149020618No Hit
CATAGACTACCACTACCCAGTACAGGAGCACCCTCTATGTGTAGAACCAT8090.9471847888445283No Hit
CATAGACCATCCTCCCACCTTGACCTCCCAAAGTGCTGGGATTACAGGTG7480.8757654166325182No Hit
CATAGACCATCCTCCCACCTTGACCTCTTAAGTAGCTGGGACTACAGGTG6270.7340974815890225No Hit
CATAGACTGTTCTTTTAAATTAACACAGTCAGAGAAAAATTTTTTTAAAA5470.6404327311470419No Hit
CATAGACTACCACCACCCAGTACAGGAGCACCCTCTATGTGTAGAACCAT5310.6216997810586459No Hit
CATAGAGCCTGGCATTTGAGGTAAGGCTTGTGAGGGCTGAAGTCTATGTG4970.5818922621208041No Hit
CATAGACTCAAGAAACTTACAATCATGGCAGAAAGTGAAGGAGAGGCCAC4220.49408155858144737No Hit
CATAGAGATGTCAAGAGCAATGCCCATGCTGAAGTCCCATGATCTATGTG4200.4917399398203979No Hit
CATAGACCATCCTCCCACCTTGACCTCCATCTTGACCTCCCAAAGTGCTG3600.4214913769889124No Hit
CATAGACCATCCTCCCACCTTGACCTCCCAGAGTGCTGGAATTATAGGCG3530.4132957113252391No Hit
CATAGAGATGTCAAGAGCAATGCCCACCCCATCCTACATGTGTCTATGTG3330.389879523714744No Hit
CATAGACCATCCTCCCACCTTGACCTCCCAAAGTGCTATTACTACAGGTG3100.3629509079626746No Hit
CATAGACCATCCTCCCACCTTGACCTCCCAAAGTGCTGAGATTACAGGTG2960.346559576635328No Hit
CATAGACCATCCTCCCACCTTGACCTCCCAAAGTGCTGGGATTACAGGCA2920.34187633911322896No Hit
CATAGACCATCCTCCCACCTTGACCTCTCGAGTAGCTGGGACTGCAGGCC2810.32899743592745667No Hit
CATAGAGGTGAGCGGCTGTCTCCACAAGTCCGCGCAGAGCCTTCAGGTCG2680.31377691398063484No Hit
CATAGAAGCAGCATTGATCATCCTCCAGAAGCAGCATTTTAACACAGCAT2370.27748182318436737No Hit
CATAGACCATCCTCCCACCTTGACCTTCCAAAGTGCTAGGATAATAGGTG2320.27162777628174356No Hit
CATAGAGATGTCAAGAGCAATGCCCATGCCTAGCCATTTTTGGTTCTATG2190.25640725433492173No Hit
CATAGAGGTGAGCGGCTGTCTCCAAGTCCGCGCAGAGCCTTCAGGTCAGA2160.25289482619334747No Hit
CATAGACCATCCTCCCACCTTGACCTCCCAAAGTGCTGGGATTACAGGCG2070.24235754176862465No Hit
CATAGAGGTGAGCGGCTGTCTCCACAAGTCCGCGCAGAGCCTTCAGGCCA2040.23884511362705038No Hit
CATAGAGGTGAGCGGCTGTCTCCACATGTGTCCTGAATGAGAGCAGCTCC2000.23416187610495134No Hit
CATAGAGTTTTGTTCCCTTGCTGGCAAGTAGCTGTGATCCTTTGGAGAAG1860.21777054477760474No Hit
CATAGACCATCCTCCCACCTTGACCTCCCAAAGTGCTGGGATTACAGGAG1860.21777054477760474No Hit
CATAGAAGGTGATAATCATGACAGCCACCCCATCCTACATGTGTCTATGT1750.20489164159183246No Hit
CATAGAGCCTGGCATTTGAGGTAAGGCACTTGGTCCAGACTTTCTATGTG1750.20489164159183246No Hit
CATAGAGGTGAGCGGCTGTCTCCACAGGTCCGCGCAGAGCCTTCAGGTCA1680.19669597592815916No Hit
CATAGACCATCCTCCCACCTTGACCTCCCAAAGTGCTGAGATTACACACG1660.1943543571671096No Hit
CATAGACTCAAGAAACTTACAATCATGGCAGAAGGCAAAAAAGAAGCAGG1640.1920127384060601No Hit
CATAGAGGTGAGCGGCTGTCTCCATGCTGAAGTCCCATGATCTATGTGTA1630.19084192902553535No Hit
CATAGAGATGTCAAGAGCAATGCCCAGCCACATTATTTTCTATGTGTAGA1620.1896711196450106No Hit
CATAGACCATCCTCCCACCTTGACCTTGGACGTCTAGCCTCAAGAACTGT1600.18732950088396108No Hit
CATAGAGATGTCAAGAGCAATGCCCGGCCACATTATTTTCTATGTGTAGA1590.18615869150343634No Hit
CATAGAGGTGAGCGGCTGTCTCCACAAGTCCGCGCAGAGCCTTCGGGTCA1570.18381707274238682No Hit
CATAGAGGTGAGCGGCTGTCTCCACAAGTCCGCGCGGAGCCTTCAGGTCA1520.17796302583976303No Hit
CATAGAGGTGAGCGGCTGTCTCCACGAGTCCGCGCAGAGCCTTCAGGTCA1490.17445059769818877No Hit
CATAGACCATCCTCCCACCTTGACCTCCCAAGTAGCTGGGACTACAGGTG1490.17445059769818877No Hit
CATAGACCATCCTCCCACCTTGACCTCCCAACAGGTACTGGGATTACAGG1490.17445059769818877No Hit
CATAGAGGTGAGCGGCTGTCTCCACACGTCCGCGCAGAGCCTTCAGGTCA1430.1674257414150402No Hit
CATAGAGGTGAGCGGCTGTCTCCACAAGTCCGCGCAGGGCCTTCAGGTCA1430.1674257414150402No Hit
CATAGATCCCAGGCTTTAGAAAATATACCACCACCCAGTACAGGAGCACC1410.1650841226539907No Hit
CATAGAAGGTGATAATCATGACAGCCAAGGCAGCCAAGCCGGCCAGGCAG1400.16391331327346595No Hit
CATAGAGGTGAGCGGCTGTCTCCACAAGTCCGCGCAGAGCCCTCAGGTCA1390.16274250389294118No Hit
CATAGACCATCCTCCCACCTTGACCTCCATCCTCCCATCTCAAGTCTCAC1310.15337602884874313No Hit
CATAGACCATCCTCCCACCTTGACCTATCCTCCCATCTCAAGTCTCACTC1290.1510344100876936No Hit
CATAGACCATCCTCCCACCTTGACCTCCCAAAGTGCTAGGATTACAAGTG1270.14869279132664412No Hit
CATAGACCATCCTCCCACCTTGACCTCTCAAAGTGCTAGGGTTACAGGCA1250.1463511725655946No Hit
CATAGACCATCCTCCCACCTTGACCTCCCAAGTAACTGGGACTACAGGTG1220.1428387444240203No Hit
CATAGACCATCCTCCCACCTTGACCTACAGGATAGTTGAAACTATAGGCG1220.1428387444240203No Hit
CATAGAGGTGAGCGGCTGTCTCCACAAGTCCGCGCAGAGCCTCCAGGTCA1170.13698469752139655No Hit
CATAGACCATCCTCCCACCTTGACCTCCCAGGTAGCAAGAACTACAGGCA1160.13581388814087178No Hit
CATAGACCATCCTCCCACCTTGACCTCCCAAAGTACTGGGATTATAGGCG1140.13347226937982226No Hit
CATAGACCATCCTCCCACCTTGACCTGCGTCATGAGCCACCATGCCCGGC1060.12410579433562421No Hit
CATAGAAGCAGCATTGATCATCCTCCACCCAGTACAGGAGCACCCTCTAT1050.12293498495509947No Hit
CATAGACCATCCTCCCACCTTGACCTCCCAAGTAGCTGGGTTTACACGTG1020.11942255681352519No Hit
CATAGAAGGTGATAATCATGACAGCCAAAAGGGTTTGAGGACTGTTTGCA1000.11708093805247567No Hit
CATAGACCATCCTCCCACCTTGACCTCCCAAAGTGCTTGGATTACAGGTG990.11591012867195093No Hit
CATAGACTCAAGAAACTTACAATCATGGCAGAGGGCGAAGGGGAAGCAGG980.11473931929142617No Hit
CATAGACCATCCTCCCACCTTGACCTCCCAAAGTGTTAGGATTACAGGCA940.11005608176932714No Hit
CATAGAGGTGAGCGGCTGTCTCCACAAGCCCGCGCAGAGCCTTCAGGTCA910.10654365362775285No Hit
CATAGACCATCCTCCCACCTTGACCTCCCAAAGTGCTGAGATTACAGAAG870.10186041610565383No Hit
CATAGACTACCACTACCCAGCACACCCAGTACAGGAGCACCCTCTATGTG860.10068960672512908No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)