FastQCFastQC Report
Wed 8 May 2024
EGAF00005804613

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005804613
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences111740
Total Bases16.7 Mbp
Sequences flagged as poor quality0
Sequence length150
%GC38

[FAIL]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
CATAGAGCAGTATCCCAGTTAGCTCCTGACAATACCGCGTCTATGTGTAG76156.814927510291749No Hit
CATAGATTCCCCTCATACCACGCCTCCCTCTACCAGCCTCAGTTCTATGT67496.039914086271702No Hit
CATAGAAGAGAACCAAAAATGGACCCAGAAGAGAAGTACCAGGTCTATGT59135.291748702344728No Hit
CATAGAGGTGAGCGCCAGTCTCCCAGTAATCTATGTGTAGAACCATGTCG47854.282262394845176No Hit
CATAGAAAAGTGTATTATGGGCCCAGGAGTTGACAAACGACAGCTTCTAT31212.7930911043493825No Hit
CATAGAAAAGGGAGGGATTACGGGTGACACCAAAAGCACAAGTTCTATGT29482.638267406479327No Hit
CATAGACGTGTGGTTGGGATGTCAGCTCCTCTTCTCTTCCCTCTATGTGT29302.622158582423483No Hit
CATAGAGGTGAGCGGCTGTCTCCAGTAATCTATGTGTAGAACCATGTCGT20091.7979237515661355No Hit
CATAGATCCATGGTGTGCAAGGACAATCACAGGGCTGCATGGTGACTTTT19581.7522820834079114No Hit
CATAGATGAGGGATGTAGGCTGTACATGTACACGGCAGGACTGTCTATGT15531.389833542151423No Hit
CATAGAGCAGTATCCCAGTCAGCTCCTGACAATACCGCGTCTATGTGTAG15521.3889386074816539No Hit
CATAGAACATCTCCCTGTTCCTCCCACCTAAACTCCTGAGATCCTCTATG13951.248433864327904No Hit
CATAGATGGGTCCCATTCTGTTTGCAGGATGAATGGGGACATCTATGTGT13721.2278503669232146No Hit
CATAGAAAAGTGTATTATGGGCCCAGGGCTGCATGGTGACTTTTCTATGT13121.174154286737068No Hit
CATAGAACTCTTACCCTTTTGCCAGGGCTGCATGGTGACTTTTCTATGTG11501.029174870234473No Hit
CATAGAACATCTCCCTGTTCCTCCCAAGGTCAAGGGCAGGGATTCTATGT11211.0032217648111688No Hit
CATAGAAAAGTGTATTATGGGCCCAGGAGGAGTTGACAAACGACAGCTTC9990.8940397350993378No Hit
CATAGAACTAGTTCCAGCACCACCAGGGCTGCATGGTGACTTTTCTATGT8330.745480579917666No Hit
CATAGAAGGATAAAGGCGGAAGAGAGCATAATCTATAGGAGTTGACAAAC8250.7383211025595132No Hit
CATAGATTCTGTTTCTCTTCCCCCAAAGCAGCAAACAATTTCAGAAAGTC8030.7186325398245927No Hit
CATAGAACTGACCATACACTTGCCCTTCGTCTAGGATGAGATAATTGCCC8020.7177376051548237No Hit
CATAGAGGCCATTCTTCTCATGCTGAAGGATAGTTGGGTGCTCTATGTGT7980.7141578664757473No Hit
CATAGAGGTGAGCGGCTGTCTCCCAGTAATCTATGTGTAGAACCATGTCG7810.6989439770896724No Hit
CATAGAGGCCATTCTTCTCATGCTGGGTAGAATCTTGAACTCAGGAGTCT7610.6810452836942903No Hit
CATAGAAGGATAAAGGCGGAAGAGAGCATAATCTACAGAGTGGGAGTCAT7480.6694111329872919No Hit
CATAGAAGGGGTGATGCTCTGATGGACACTGCTCACGATGGTATTACATG7370.6595668516198318No Hit
CATAGATCCATGGTGTGCAAGGACAAGGGCAGGGCTGCATGGTGACTTTT7290.6524073742616789No Hit
CATAGATTCTGTTTCTCTTCCCCCAAGGTCAAGGGCAGGGATTCTATGTG6950.6219795954895292No Hit
CATAGAAGGGGTGATGCTCTGATGGATCTCAGAGTTAGCTTGCCTCTATG6930.6201897261499911No Hit
CATAGATGAGGGATGTAGGCTGTACACGGCAGGGCTGCATGGTGACTTTT6510.5826024700196886No Hit
CATAGAAGAGAACCAAAAATGGACCCACCTAAACTCCTGAGATCCTCTAT6480.5799176660103812No Hit
CATAGAACTGACCATACACTTGCCCTCTGCTTTTACAAACTCAAGTGATT6470.5790227313406121No Hit
CATAGAACTGTCCCCTACTTTTCACCAAGGTCAAGGGCAGGGATTCTATG6470.5790227313406121No Hit
CATAGAACCTCAAGCCGGAAAACCTTGCACAGGACATTGGGGAATTCTAT6330.5664936459638445No Hit
CATAGAAGGGGTGATGCTCTGATGGATCAGTTAGGCTACTTGGGGGTCTC6330.5664936459638445No Hit
CATAGACTGGTGTAATGTGTCATATACTTGGGTAGAATCTTGAACTCAGG6230.5575442992661536No Hit
CATAGAAGGATAAAGGCGGAAGAGAGCCATGCTGAAGTCCCATGATCTAT6090.545015213889386No Hit
CATAGAGGCCATTCTTCTCATGCTGGGTCCCAAAGTAGGCAATTCTATGT5950.5324861285126186No Hit
CATAGAATAGCTGTGTTGAAGAACCTCAGTTAGGCTACTTGGGGGTCTCT5800.5190621084660819No Hit
CATAGAAGGATAAAGGCGGAAGAGAGCCGTTTCCCCCATACTGTCTATGT5630.5038482190800071No Hit
CATAGAACCAACCAATAATAATGTGCTTGTCTGCTTTTACAAACTCAAGT5200.46536602827993556No Hit
CATAGACTGGTGTAATGTGTCATATACTTGGATCTCAGAGTTAGCTTGCC5160.46178628960085916No Hit
CATAGACAATTTCAGTGCGGCCGATGTACGGTAGGTGGCTTCTGGTGCAT5020.44925720422409166No Hit
CATAGACAATTTCAGTGCGGCCGATGACACTGTCTCTCCCTCTCTCACAC5010.4483622695543225No Hit
CATAGATGGGTCCCAAAGTAGGCAATTCTATGTGTAGAACCATGTCGTCA4920.4403078575264006No Hit
CATAGAGGCCATTCTTCTCATGCTGGATCTCAGAGTTAGCTTGCCTCTAT4830.4322534454984786No Hit
CATAGACACTTGACCATGCCCTTGTTCTACGGTTGCAGGATGAATGGGGA4730.42330409880078756No Hit
CATAGACGTGTGGTTGGGATGTCAGCTCCTGACAATACCGCGTCTATGTG4680.41882942545194196No Hit
CATAGAGGGATGGTATCAGAGAAGGCTGTCTCTCCCTCTCTCACACATCT4610.41256488276355824No Hit
CATAGACAATTTCAGTGCGGCCGATGTACGGTTGCAGGATGAATGGGGAC4400.393771254698407No Hit
CATAGATGGCCCACTGACATTTTCCTTCACATGTACACGGCAGGACTGTC4380.3919813853588688No Hit
CATAGACACTTGACCATGCCCTTGTTCAGACACTTGAAAGCTCCCTGGAT4330.38750671201002324No Hit
CATAGACTGGTGTAATGTGTCATATACTTGGTAGGTGGCTTCTGGTGCAT4180.37408269196348665No Hit
CATAGATGAAAACATTCCGAAGCTAGATCAGTGTAGATGTGGTTGCATGG4170.37318775729371756No Hit
CATAGAAGGATAAAGGCGGAAGAGAGCGCCAGTCTCCCAGTAATCTATGT3940.3526042598890281No Hit
CATAGATGGGTCCCATTCTGTTTGCAGATGGGTCCCAAAGTAGGCAATTC3910.3499194558797208No Hit
CATAGAACATCTCCCTGTTCCTCCCATACGGTTGCAGGATGAATGGGGAC3800.3400751745122606No Hit
CATAGAACCTCAAGCCGGAAAACCTTACGGTAGGTGGCTTCTGGTGCATC3770.3373903705029533No Hit
CATAGAAAAGTGTATTATGGGCCCAGGCAGCTCCTCTTCTCTTCCCTCTA3710.33202076248433865No Hit
CATAGACACTTGACCATGCCCTTGTTCTCATAGACACTTGAAAGCTCCCT3690.3302308931448004No Hit
CATAGATGGGTCCCATTCTGTTTGCACTTGGTCTCATAGATGGGTCCCAA3690.3302308931448004No Hit
CATAGAGTTCCAGCAAAATGAAGGGGTGATGCTCTGAGGAAGTGACATGC3680.32933595847503133No Hit
CATAGATCCATGGTGTGCAAGGACAAGGACAGGGGTGTGGTGTTCTGTCT3470.31054233040988005No Hit
CATAGAGAAGGAAAACTGGGCTGTGGATCTCAGAGTTAGCTTGCCTCTAT3460.30964739574011096No Hit
CATAGAACTAGTTCCAGCACCACCAGTTAGGCTACTTGGGGGTCTCTATG3440.30785752640057273No Hit
CATAGATGAAAACATTCCGAAGCTAGATCAGTGTAAGTGCACAGTTTGGA3440.30785752640057273No Hit
CATAGAGGTGTTAAGTGTGCCCATTGTACACTGCTCACGATGGTATTACA3400.30427778772149633No Hit
CATAGAGAAGGAAAACTGGGCTGTGGACACTTGAAAGCTCCCTGGATCTA3400.30427778772149633No Hit
CATAGACCAGGACAATCACAGGGCACATGTACACGGCAGGACTGTCTATG3170.2836942903168069No Hit
CATAGATGGGTCCCATTCTGTTTGCATAGATGGGTCCCAAAGTAGGCAAT3120.2792196169679613No Hit
CATAGATGGGTCCCATTCTGTTTGCATGGGTCCCAAAGTAGGCAATTCTA3110.27832468229819224No Hit
CATAGAAGGATAAAGGCGGAAGAGAGCGTGTATGTGAGTGCCAAATCTAT3080.2756398782888849No Hit
CATAGAAAAGGGAGGGATTACGGGTGGATCTCAGAGTTAGCTTGCCTCTA3070.27474494361911583No Hit
CATAGACAATTTCAGTGCGGCCGATGCCAATGTCCTCTTCACCTCCCAGA3030.2711652049400394No Hit
CATAGAACCAACATCTTAATAGCTAAAAGGTCGTCAGTGTGCGTGTATGT3020.2702702702702703No Hit
CATAGAATAGCTGTGTTGAAGAACCTCAGGGCTGCATGGTGACTTTTCTA2960.26490066225165565No Hit
CATAGAACTGACCATACACTTGCCCTTTTGCCATGCTGAAGTCCCATGAT2930.2622158582423483No Hit
CATAGAACTCTTACCCTTTTGCCAGGTCAGTTAGGCTACTTGGGGGTCTC2900.25953105423304096No Hit
CATAGAACTGACCATACACTTGCCCTTTTGCCAAGTAAGTCTACAAAGAA2890.25863611956327187No Hit
CATAGAACTAGTTCCAGCACCACCAGTACGGTTGCAGGATGAATGGGGAC2870.2568462502237337No Hit
CATAGATGGGTCCCATTCTGTTTGCACAGGACATTGGGGAATTCTATGTG2840.2541614462144264No Hit
CATAGACAATTTCAGTGCGGCCGATGCACAGGACATTGGGGAATTCTATG2800.2505817075353499No Hit
CATAGATGGGTCCCATTCTGTTTGCAGAGACTTGGTCTCATAGATGGGTC2750.24610703418650437No Hit
CATAGAGCTTCAGATTCCATAAGTCATCCTGCTCACGATGGTATTACATG2720.24342223017719705No Hit
CATAGAAAAGTGTATTATGGGCCCAGGTACGGTTGCAGGATGAATGGGGA2700.24163236083765885No Hit
CATAGATCCATGGTGTGCAAGGACAAGGGCAGGGATTCTATGTGTAGAAC2690.24073742616788976No Hit
CATAGACACTTGACCATGCCCTTGTTCGACACTTGAAAGCTCCCTGGATC2670.2389475568283515No Hit
CATAGAACCAACCAATAATAATGTGCTTGTTGATTTAGGAAGCAGGGTTC2640.23626275281904424No Hit
CATAGAACTCTTACCCTTTTGCCAAGTAAGTCTACAAAGAACCTCTATGT2610.2335779488097369No Hit
CATAGAACTGACCATACACTTGCCCTGAACTTTCCCACCGCCCTTTTCTA2560.22910327546089138No Hit
CATAGAGAAGGAAAACTGGGCTGTGGACAGGGGTGTGGTGTTCTGTCTAT2390.21388938607481653No Hit
CATAGAGGGATGGTATCAGAGAAGGCTACGGTAGGTGGCTTCTGGTGCAT2370.21209951673527833No Hit
CATAGACAATTTCAGTGCGGCCGATGTCCTCTTCACCTCCCAGATCTATG2360.21120458206550924No Hit
CATAGAAGAGAGCATAATCTATAGAGTTGGAATGTTTGCTATTACGAGGA2360.21120458206550924No Hit
CATAGAGCTTCAGATTCCATAAGTCATCCTTACGGTAGGTGGCTTCTGGT2340.20941471272597098No Hit
CATAGAACTCTTACCCTTTTGCCAGGAGTTGACAAACGACAGCTTCTATG2310.20672990871666366No Hit
CATAGAGCTTCAGATTCCATAAGTCATCCTCGGTAGGTGGCTTCTGGTGC2190.1959906926794344No Hit
CATAGAGGTGTTAAGTGTGCCCATTGTTACGGTTGCAGGATGAATGGGGA2140.19151601933058887No Hit
CATAGACTGGCTATTGTTTGGTTTGTACAGTGTGCGTGTATGTGAGTGCC2080.18614641131197424No Hit
CATAGAACCAACCAATAATAATGTGCTTGTACGGTTGCAGGATGAATGGG2080.18614641131197424No Hit
CATAGAACCAACCAATAATAATGTGCTTGTGACACCAAAAGCACAAGTTC2050.1834616073026669No Hit
CATAGAACTGACCATACACTTGCCCTTACGGTTGCAGGATGAATGGGGAC1950.17451226060497582No Hit
CATAGAGAAGGAAAACTGGGCTGTGGGTAGAATCTTGAACTCAGGAGTCT1920.17182745659566853No Hit
CATAGACTCAGAACTGGCTCTAATTCCTACGGTAGCAGCTCCTCTTCTCT1870.16735278324682298No Hit
CATAGATGGGTCCCATTCTGTTTGCAGACTTGGTCTCATAGATGGGTCCC1860.16645784857705387No Hit
CATAGATCCATGGTGTGCAAGGACAAGTGCACAGTTTGGAATGACTCTAT1850.16556291390728478No Hit
CATAGACACTTGACCATGCCCTTGTTCATAGACACTTGAAAGCTCCCTGG1810.16198317522820835No Hit
CATAGAAAAGTGTATTATGGGCCCAGGTAGGTGGCTTCTGGTGCATCTAT1800.16108824055843923No Hit
CATAGATGAAAACATTCCGAAGCTAGATCAGTGTACATGTACACGGCAGG1800.16108824055843923No Hit
CATAGAACTGTCCCCTACTTTTCACCATAGAACTTTCCCACCGCCCTTTT1770.15840343654913192No Hit
CATAGAGGTGTTAAGTGTGCCCATTGTCGTCAGTGTAATGTTTGCTATTA1760.1575085018793628No Hit
CATAGATTCTGTTTCTCTTCCCCCAAAACAGGGCTGCATGGTGACTTTTC1760.1575085018793628No Hit
CATAGAGTTCCAGCAAAATGAAGGGGTGCTGCTCACGATGGTATTACATG1740.1557186325398246No Hit
CATAGAAAAGGGAGGGATTACGGGTGGGTCCCAAAGTAGGCAATTCTATG1710.15303382853051728No Hit
CATAGAACCAACCAATAATAATGTGCTTGTTTGTCTAGGATGAGATAATT1710.15303382853051728No Hit
CATAGACAGGGGCCAGAACTCCTAAGACAGGGGTGTGGTGTTCTGTCTAT1700.15213889386074816No Hit
CATAGAACCTCAAGCCGGAAAACCTTGTCGTCAGTGTGCACAGGACATTG1680.15034902452120993No Hit
CATAGATCCATGGTGTGCAAGGACAGGGGTGTGGTGTTCTGTCTATGTGT1670.14945408985144085No Hit
CATAGAAGGATAAAGGCGGAAGAGAGCAGCTCCTCTTCTCTTCCCTCTAT1660.14855915518167173No Hit
CATAGAACTAGTTCCAGCACCACCAGGAGTTGACAAACGACAGCTTCTAT1650.14766422051190264No Hit
CATAGAACTGACCATACACTTGCCCTGTTGCAGGATGAATGGGGACATCT1640.1467692858421335No Hit
CATAGAGCTTCAGATTCCATAAGTCATCCTACGGTAGCAGCTCCTCTTCT1570.14050474315374978No Hit
CATAGAGGCCATTCTTCTCATGCTGGACACTTGAAAGCTCCCTGGATCTA1570.14050474315374978No Hit
CATAGAATAGCTGTGTTGAAGAACCTCAAGCCGGAAAACCTGTGTGTGTA1560.13960980848398066No Hit
CATAGAACCAACCAATAATAATGTGCTTGTCAATTTCAGTTAGGCTACTT1540.13781993914444246No Hit
CATAGATGGGTCCCATTCTGTTTGCAGCAGAGACTTGGTCTCATAGATGG1490.1333452657955969No Hit
CATAGAAGAGAACCAAAAATGGACCCAAGGTCAAGGGCAGGGATTCTATG1470.1315553964560587No Hit
CATAGACGTGTGGTTGGGATGTCAGCGTGACACCAAAAGCACAAGTTCTA1410.12618578843744405No Hit
CATAGAAAAGGGAGGGATTACGGGTGGGTAGAATCTTGAACTCAGGAGTC1410.12618578843744405No Hit
CATAGACACTTGACCATGCCCTTGTTCTTGTCCCCTATTACTGAAAGTTC1400.12529085376767496No Hit
CATAGAACCAACATCTTAATAGCTAAAAGGTCTGCTTTTACAAACTCAAG1400.12529085376767496No Hit
CATAGATGAGGGATGTAGGCTGTACACGGCAGGACTGTCTATGCCATGCT1380.12350098442813676No Hit
CATAGAGAAGCCAGGGAACAAAGTGGGTCCCAAAGTAGGCAATTCTATGT1370.12260604975836764No Hit
CATAGATGAGGGATGTAGGCTGTACACATGTACACGGCAGGACTGTCTAT1340.11992124574906032No Hit
CATAGAACATCTCCCTGTTCCTCCCATAGAACATCTCCCTGTCTCTCCCT1330.11902631107929122No Hit
CATAGACAGGGGTGTGGTGTTCTGTCTATGTGTAGAACCATGTCGTCAGT1320.11813137640952212No Hit
CATAGAACTCTTACCCTTTTGCCAGGGAACAGAGTGGGAGTCATTCATGA1290.11544657240021479No Hit
CATAGACGTGTGGTTGGGATGTCAGCTACGGTTGCAGGATGAATGGGGAC1250.11186683372113836No Hit
CATAGACTGGTGTAATGTGTCATATACTTGGGGGCAGGGCTGCATGGTGA1230.11007696438160015No Hit
CATAGACAATTTCAGTGCGGCCGATGGGTCCCAAAGTAGGCAATTCTATG1230.11007696438160015No Hit
CATAGAAAAGGGAGGGATTACGGGTGGACTGGGTCCCAAAGTAGGCAATT1220.10918202971183102No Hit
CATAGAACCAACCAATAATAATGTGCTTGTGGGTCCCAAAGTAGGCAATT1190.10649722570252372No Hit
CATAGACCAGGACAATCACAGGGCAGGGCTGCATGGTGACTTTTCTATGT1130.10112761768390907No Hit

[FAIL]Adapter Content

Adapter graph

Produced by FastQC (version 0.12.1)