FastQCFastQC Report
Wed 28 Jun 2023
EGAF00005804615

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005804615
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences129385
Sequences flagged as poor quality0
Sequence length150
%GC40

[WARN]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
CATAGAGGTGAGCGGCTGTCTCCACAAGTCCGCGCAGAGCCTTCAGGTCA1744613.483788692661436No Hit
CATAGATGAGTGTCCTTGTAGATGTGCAATATGGGCTGGGTGATCTATGT46563.598562429957105No Hit
CATAGACATGATGTGCTATGAAGTTAGAGGAGAATGATATTGTTGCAGAT43213.339645244811995No Hit
CATAGAAAAAGAACTGAGGAAAGGCAACCAAAATGTCAGGGGATCCTCTA39293.036673493836225No Hit
CATAGAGGCAGAGTCCAAAGTGTCCTCTAGCCAAATTCCTTACCGATCTA35872.7723460988522626No Hit
CATAGAAGGGTTGAGTCTGGAGGCTGACACCTTCCTCCAGACTCTATGTG35132.7151524519843875No Hit
CATAGAGCTCCAAGATTTTTAGCTGTTCTGTTTACTCGGAGATTTGACTG26642.058971287243498No Hit
CATAGATCACTGATTCTGTATTTGCAAATTCTGTTTACTCGGAGATTTGA23501.8162847316149477No Hit
CATAGAGGAGTGACTTTTGTTGCTGCACCTTCCACTACCCACCTGCCTCT22961.7745488271437955No Hit
CATAGAGCAGCATTTCTCTCCAAGGAGGAGCTGACTTACTGTTCTATGTG21041.6261545001352553No Hit
CATAGATCACCAGATGCCAGTTGTGCAATATGGGCTGGGTGATCTATGTG18501.4298411716968737No Hit
CATAGATGAGTGTCCTTGTAGATGTGCAGGGCAGAGAGTGTGTTGTATTC17081.3200912006801406No Hit
CATAGAGGCACGATCTTGTTTCACTGAGCTGAGGGTCACTTCTATGTGTA13421.0372145148201106No Hit
CATAGAGGTGAGCGGCTGTCTTCAGCTCTTTGAGGCATCTATGTGTAGAA11970.9251458824438692No Hit
CATAGATGGGATTATAGGTGTGAGCCACCGCGCCTGGCCAAAAATTTCCA11820.9135525756463269No Hit
CATAGATGGGATTATAGGTGTGAGCCACTGCGCCTGGCCAAAAATTTCCA11730.9065965915678015No Hit
CATAGATACCTGTCCTCTGCCTCGAGGAGAATGATATTGTTGCAGATTTC9570.7396529736831936No Hit
CATAGAGGCAGAGTCCAAAGTGTCCTGGGAAAGGTATGTGGCACATCTAT9370.7241952312864706No Hit
CATAGATGGGATTATAGGTGTGAGCCACCACGCCTGGCCAAAAATTTCCA8140.6291301155466245No Hit
CATAGATCTCCCTAATTAACTAAGCTAATGTTCTGTTTACTCGGAGATTT8110.626811454187116No Hit
CATAGAGGTGAGCGGCTGTCTCCAGCTCTTTGAGGCATCTATGTGTAGAA7850.6067163890713761No Hit
CATAGACATGATGTGCTATGAAGTTAGAGGAGGAGCTGACTTACTGTTCT7850.6067163890713761No Hit
CATAGAAGTACCATCAGAGTGAACAGGGCAGAGAGTGTGTTGTATTCTAT7810.6036248405920316No Hit
CATAGATCCCATACTCCTCCATTACCCTTCCACTACCCACCTGCCTCTAT7210.5572516134018627No Hit
CATAGAGGTTTTCTGTTTCTGTGTTAGTTTGCTTTTCTGTTTACTCGGAG6970.5387023225257951No Hit
CATAGAAGGGTTGAGTCTGGAGGCTGACACCTTCCACTACCCACCTGCCT6780.5240174672489083No Hit
CATAGACACACTGACAATTTGCACCTGGGTAGAGAGTTCTGTAGATGTTC6700.5178343702902192No Hit
CATAGAGTGCTCTCTTTCCCCACCCTAACCTCCCACCCCAGCTGTCTATG6590.5093326119720215No Hit
CATAGAGGAGTGACTTTTGTTGCTGCAACAATGCCTCACACACAGGTCTA6420.49619353093480695No Hit
CATAGAGCTCCAAGATTTTTAGCTGTTCTATGTGAGAAGTGTATTAATTA6180.47764424005873946No Hit
CATAGACGAAATGTACAGGTTGCTAAGTTTACGGCAACATATCAGAAGCA6160.4760984658190671No Hit
CATAGAGTGCTCTCTTTCCCCACCCTTCCACTACCCACCTGCCTCTATGT6130.47377980445955864No Hit
CATAGAGGCAGAGTCCAAAGTGTCCTTCCACTACCCACCTGCCTCTATGT6040.4668238203810333No Hit
CATAGAGGTTTTCTGTTTCTGTGTTAGTTTGCTTTCTGTTTACTCGGAGA5680.4389998840669321No Hit
CATAGATGGGAGTTTCTAGCTTTGGTCTTGCTCCTTCTCACACAAATCTA5560.4297252386288982No Hit
CATAGACCATCCCTTCTACAAGAGGCAGTGTACGGCAACATATCAGAAGC5500.4250879159098814No Hit
CATAGAAGTACCATCAGAGTGAACAGGCTACGATAGCGAGAAGAGTGGAG5500.4250879159098814No Hit
CATAGATGGGAGTTTCTAGCTTTGGTCTTACGGCAACATATCAGAAGCAT5290.4088572863933222No Hit
CATAGACACACTGACAATTTGCACCTGACACTGTCTTCAGCTCTTTGAGG5220.4034470765544692No Hit
CATAGAGGAGAATGATATTGTTGCAGATTTCTATGTGTAGAACCATGTCG5200.40190130231479687No Hit
CATAGAGGCACGATCTTGTTTCACTGTGTCTCATAGGGCACTGAGACCAC4950.38257912431889324No Hit
CATAGAGCAGCATTCTCTCAGGGCTGTTCTCTATGTGTAGAACCATGTCG4890.37794180159987634No Hit
CATAGAGGTGGTGGGTACTTGTAGTCCATCCAGTCCAGCTCCTTCTATGT4700.36325694632298955No Hit
CATAGACCATCCCTTCTACAAGAGGCATTCTCTCAGGGCTGTTCTCTATG4680.3617111720833172No Hit
CATAGAGTGCTCTCTTTCCCCACCCTCTAGCCAAATTCCTTACCGATCTA4610.3563009622444642No Hit
CATAGAGGTTTTCTGTTTCTGTGTTAGTTTGCTTAGGATAATGGCTTCCA4580.35398230088495575No Hit
CATAGAAGCCTTTTGAGATCTGAGCATCTACGGCAACATATCAGAAGCAT4510.3485720910461027No Hit
CATAGAGTCCTTCCCTCTCACACATGTCTATGCCCCAGGTAGCAAAACAG4470.3454805425667581No Hit
CATAGAAGCCTTTTGAGATCTGAGCATCTAGAGGAGAATGATATTGTTGC4460.344707655446922No Hit
CATAGAAACAGCAAAGCCCTCCACCACCCACCTGCCTCTATGTGTAGAAC4350.33620589712872434No Hit
CATAGACCATCCCTTCTACAAGAGGCAACAATGCCTCACACACAGGTCTA4210.32538547745101826No Hit
CATAGAGCCCCCAGAGAAGAATGACCTTCCACTACCCACCTGCCTCTATG4050.3130192835336399No Hit
CATAGAGCTCCAAGATTTTTAGCTGTTCTATGTGCCCCAGGTAGCAAAAC3990.30838196081462305No Hit
CATAGAGTGCTCTCTTTCCCCACCCTAGCTGTCAGGGCAGAGAGTGTGTT3970.3068361865749507No Hit
CATAGAGTCCTTCCCTCTCACACATGTCTATGTAGGAGGAGCTGACTTAC3930.30374463809560615No Hit
CATAGAAACAGCAAAGCCTTCCACTACCCACCTGCCTCTATGTGTAGAAC3910.30219886385593386No Hit
CATAGACCACACACACAACTGAGAGTGTAACAATGCCTCACACACAGGTC3730.28828689569888316No Hit
CATAGACCAAGAGTTGACAAGGATCTGGAACAATGCCTCACACACAGGTC3680.28442246009970246No Hit
CATAGAGCCCCCAGAGAAGAATGACCTACGATAGCGAGAAGAGTGGAGGC3560.27514781466166865No Hit
CATAGAGCTCCAAGATTTTTAGCTGTTCTCTATGTGTAGAACCATGTCGT3500.2705104919426518No Hit
CATAGAGGTTTTCTGTTTCTGTGTTAGTTTGCTAAGTGTAATAGCCTCTA3490.2697376048228156No Hit
CATAGAGTGAAACCCTGTCTCTACCAAAACTACAAAACTTATCTGGGCAC3460.2674189434633072No Hit
CATAGATCCCATACTCCTCCATTACCCTATGACCCCAGGTAGCAAAACAG3440.2658731692236349No Hit
CATAGAGGTTTTCTGTTTCTGTGTTAGTTTGCTTCTGTTTACTCGGAGAT3290.2542798624260927No Hit
CATAGAGCAGCATTTCTCTCCAAGGAGCATTCTCTCAGGGCTGTTCTCTA3270.2527340881864204No Hit
CATAGATGGGAGTTTCTAGCTTTGGTCTGTTTACTCGGAGATTTGACTGT3240.2504154268269119No Hit
CATAGAGGCACAGGGATAATGAGGGAGGAGGAGCTGACTTACTGTTCTAT3220.24886965258723964No Hit
CATAGAAACAGCAAAGCCCTCCACCAGTCCATCCAGTCCAGCTCCTTCTA3150.2434594427483866No Hit
CATAGAACCAACCTCTCTATCTCCGTAGAACTAACCTCCCACCCCAGCTG3100.23959500714920587No Hit
CATAGATACCTGTCCTCTGCCTCGAGTACGGCAACATATCAGAAGCATCT3100.23959500714920587No Hit
CATAGAAGCCTTTTGAGATCTGAGCATTCTCTCAGGGCTGTTCTCTATGT3080.23804923290953356No Hit
CATAGAGCTCCAAGATTTTTAGCTGTTCTCGCATTCTCTCAGGGCTGTTC3040.23495768443018897No Hit
CATAGAGGCACGATCTTGTTTCACTGTCGTCAGTGTTGGGAAAGGTATGT3000.2318661359508444No Hit
CATAGAGCTCCAAGATTTTTAGCTGTTCTGCATTCTCTCAGGGCTGTTCT2940.22722881323182748No Hit
CATAGACCATCCCTTCTACAAGAGGCAGGTGGGTAGAGAGTTCTGTAGAT2900.2241372647524829No Hit
CATAGAGCTCCAAGATTTTTAGCTGTTCTATGTTAGAGAAGTGTATTAAT2810.21718128067395756No Hit
CATAGAGTGAAACCCTGTCTCTACCAAAAATACAAAACTTATCTGGGCAC2740.21177107083510455No Hit
CATAGAGGTGGTGGGTACTTGTAGTCCCAGCTACTCGGGAGGCTGAGGCA2710.2094524094755961No Hit
CATAGAGTGATCCTCCTTTCTCAGCCCCAGGTAGCAAAACAGAGTCTATG2660.20558797387641536No Hit
CATAGACACACTGACAATTTGCACCTGTACGGCAACATATCAGAAGCATC2650.20481508675657922No Hit
CATAGATGGGAGTTTCTAGCTTTGGTCTATAGGAATCTTTGGGAGGCTAT2620.20249642539707075No Hit
CATAGAGTCCTTCCCTCTCACACATGTCTACAGGGCAGAGAGTGTGTTGT2570.19863198979789004No Hit
CATAGATCACTGATTCTGTATTTGCAAATTCTGCTACCGTATCTTGCTCC2570.19863198979789004No Hit
CATAGACACACTGACAATTTGCACCTGCATAGAGCAGCATTCTCTCAGGG2520.19476755419870928No Hit
CATAGAGCTCCAAGATTTTTAGCTGTTCTATGTGTAGAAGTGTATTAATT2520.19476755419870928No Hit
CATAGAAGCCTTTTGAGATCTGAGCATCTATACGGCAACATATCAGAAGC2480.1916760057193647No Hit
CATAGAGTGCTCTCTTTCCCCACCCTACGGCAACATATCAGAAGCATCTA2450.18935734435985624No Hit
CATAGAAACAGCAAAGCCCTCCACCAGCAGAGACTTGGTCTCATAGAGCC2410.18626579588051165No Hit
CATAGACCACACACACAACTGAGAGTGTGTTGTATTCAGCTTACACTGCA2370.18317424740116706No Hit
CATAGAAGCCTTTTGAGATCTGAGCATCTATCTACGGCAACATATCAGAA2360.18240136028133092No Hit
CATAGAGTGAAACCCTGTCTCTACCAAAAGTACCAAAACTTATCTGGGCA2350.18162847316149477No Hit
CATAGAGGTTTTCTGTTTCTGTGTTAGTTTGCGGTTTTCTGTTTACTCGG2330.18008269892182246No Hit
CATAGATGAGTGTCCTTGTAGATGTGCAGGAATCTTTGGGAGGCTATTAG2300.17776403756231401No Hit
CATAGATCACTGATTCTGTATTTGCAAATTCTACACTGACGGCAACATAT2300.17776403756231401No Hit
CATAGATATTCTGCCCCCTCCTCTCCTACGGCAACATATCAGAAGCATCT2260.17467248908296942No Hit
CATAGAGGTGGTGGGTACTTGTAGTCCGTGTTGAAGCAGAGGTAGATGGA2250.17389960196313328No Hit
CATAGAGGTGGTGGGTACTTGTAGTCCGTGTCAGGGCAGAGAGTGTGTTG2240.17312671484329714No Hit
CATAGAGCTCCAAGATTTTTAGCTGTTCTATACACGGAAGACACAGCACA2200.17003516636395255No Hit
CATAGACATGATGTGCTATGAAGTTAGAGGTCACTGACAGGTCTTAAAGC2200.17003516636395255No Hit
CATAGATCACCAGATGCCAGTTGTGCAACCAAAATGTCAGGGGATCCTCT2180.16848939212428027No Hit
CATAGATCACCAGATGCCAGTTGTGCGTGTGGGAAAGGTATGTGGCACAT2180.16848939212428027No Hit
CATAGATATTCTGCCCCCTCCTCTCCACACGGAAGACACAGCACACTCTT2170.1677165050044441No Hit
CATAGAGGTTTTCTGTTTCTGTGTTAGTTTGCTGAGGTTAATGGCTTCCA2130.1646249565250995No Hit
CATAGAGCTCCAAGATTTTTAGCTGTTCTATGTGGAGGAGAATGATATTG2100.16230629516559109No Hit
CATAGAAGTACCATCAGAGTGAACAGGAGGAGCTGACTTACTGTTCTATG2040.15766897244657418No Hit
CATAGAGTCCTTCCCTCTCACACATGTCTAGCTTACACTGCACATGGGGT1960.151485875487885No Hit
CATAGAGGCACGATCTTGTTTCACTGTCTCATAGGGCACTGAGACCACAT1940.1499401012482127No Hit
CATAGACCCCCTTGAGTTCACTGGACATAGGGCACTGAGACCACATCTAT1920.1483943270085404No Hit
CATAGAAGTACCATCAGAGTGAACAGGCGTCCATCCAGTCCAGCTCCTTC1900.1468485527688681No Hit
CATAGAGGCACGATCTTGTTTCACTGTCGTCAGTGTGGGAAAGGTATGTG1880.14530277852919582No Hit
CATAGATGGGATTATAGGTGTGAGCCATCGCGCCTGGCCAAAAATTTCCA1840.14221123004985123No Hit
CATAGATGAGTGTCCTTGTAGATGTGCATTCTCTCAGGGCTGTTCTCTAT1830.14143834293001506No Hit
CATAGAGTGATCCTCCTTTCTCAGCCTACGGAAGACACAGCACACTCTTC1820.14066545581017892No Hit
CATAGATCACCAGATGCCAGTTGTGCTCTACACATAGGGCACTGAGACCA1790.1383467944506705No Hit
CATAGAGTGCTCTCTTTCCCCACCCCAGGTAGCAAAACAGAGTCTATGTG1710.1321636974919813No Hit
CATAGAAGTACCATCAGAGTGAACAGGAAACATTGGAAAGATGGGGATCT1680.12984503613247284No Hit
CATAGATCACCAGATGCCAGTTGTGCTATGAAGCAGAGGTAGATGGATCA1640.12675348765312824No Hit
CATAGACCATCCCTTCTACAAGAGGCACAGGAATCTTTGGGAGGCTATTA1630.12598060053329213No Hit
CATAGAAAAAGAACTGAGGAAAGGCAACGGCAACATATCAGAAGCATCTA1600.12366193917378367No Hit
CATAGAGGCACAGGGATAATGAGGGAGCTTACACTGCACATGGGGTCTAT1600.12366193917378367No Hit
CATAGAGTGAAACCCTGTCTCTACCAAAAATACAAAAAACTTATCTGGGC1590.12288905205394753No Hit
CATAGAGGCAGAGTCCAAAGTGTCCTCACTGAGCTGAGGGTCACTTCTAT1540.11902461645476678No Hit
CATAGAGTGATCCTCCTTTCTCAGCTTACACTGCACATGGGGTCTATGTG1530.11825172933493064No Hit
CATAGAGTGCTCTCTTTCCCCACCCTACAATATCTTGCTCCTTCTCACAC1520.11747884221509448No Hit
CATAGAGCTCCAAGATTTTTAGCTGTTCTCTATGTGGCATTCTCTCAGGG1520.11747884221509448No Hit
CATAGAGGTTTTCTGTTTCTGTGTTAGTTTGCTGAGGATAACGGCTTCCA1510.11670595509525833No Hit
CATAGAGGCAGAGTCCAAAGTGTCCTTGTAGATGTGCAATATGGGCTGGG1470.11361440661591374No Hit
CATAGAGTCCTTCCCTCTCACACATGTATAGAGCCCCCAGAGGAGAATGA1440.1112957452564053No Hit
CATAGAGGCACAGGGATAATGAGGGAGGAGAATGATATTGTTGCAGATTT1430.11052285813656915No Hit
CATAGAGGTTTTCTGTTTCTGTGTTAGTTTGCGGTTCTGTTTACTCGGAG1330.10279398693820768No Hit
CATAGAGTCCTTCCCTCTCACACATGTCGTCAGTGTAGGAGGAGCTGACT1310.10124821269853537No Hit
CATAGAAACAGCAAAGCCCTCCACCAGTCCAGCTCCTCCATCCAGTCCAG1300.10047532557869922No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)